RNA–Protein interactions for RNA: ENST00000494297.5

SRPRB-205, Transcript of SRP receptor subunit beta, humanhuman

TSL 2

Gene SRPRB, Length 555 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SRPRB-205ENST00000494297 ARID4BQ4LE39 1312 aaPredicted RBP8.28□□□□□ -1.08
SRPRB-205ENST00000494297 REREQ9P2R6 1566 aa8.27□□□□□ -1.09
SRPRB-205ENST00000494297 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP8.27□□□□□ -1.09
SRPRB-205ENST00000494297 KIDINS220Q9ULH0 1771 aa8.27□□□□□ -1.09
SRPRB-205ENST00000494297 ABCC5O15440 1437 aa8.27□□□□□ -1.09
SRPRB-205ENST00000494297 PTPN23Q9H3S7 1636 aa8.26□□□□□ -1.09
SRPRB-205ENST00000494297 AGLP35573 1532 aa8.26□□□□□ -1.09
SRPRB-205ENST00000494297 ATP7AQ04656 1500 aa8.26□□□□□ -1.09
SRPRB-205ENST00000494297 AKT1S1Q96B36 256 aa8.26□□□□□ -1.09
SRPRB-205ENST00000494297 DIP2CQ9Y2E4 1556 aa8.26□□□□□ -1.09
SRPRB-205ENST00000494297 DHX29Q7Z478 1369 aaKnown RBP8.25□□□□□ -1.09
SRPRB-205ENST00000494297 EVX2Q03828 476 aa8.25□□□□□ -1.09
SRPRB-205ENST00000494297 INO80Q9ULG1 1556 aaPredicted RBP8.25□□□□□ -1.09
SRPRB-205ENST00000494297 A2MP01023 1474 aa8.25□□□□□ -1.09
SRPRB-205ENST00000494297 ABCA6Q8N139 1617 aa8.25□□□□□ -1.09
SRPRB-205ENST00000494297 MAST1Q9Y2H9 1570 aa8.24□□□□□ -1.09
SRPRB-205ENST00000494297 DAPK1P53355 1430 aa8.24□□□□□ -1.09
SRPRB-205ENST00000494297 ATXN8OSP0DMR3 200 aa8.24□□□□□ -1.09
SRPRB-205ENST00000494297 FAM50AQ14320 339 aaKnown RBP8.24□□□□□ -1.09
SRPRB-205ENST00000494297 PLSCR2Q9NRY7 297 aa8.24□□□□□ -1.09
SRPRB-205ENST00000494297 RRBP1Q9P2E9 1410 aaKnown RBP8.23□□□□□ -1.09
SRPRB-205ENST00000494297 SHANK2Q9UPX8 1470 aa8.23□□□□□ -1.09
SRPRB-205ENST00000494297 BCORL1Q5H9F3 1711 aa8.23□□□□□ -1.09
SRPRB-205ENST00000494297 SIGLEC1Q9BZZ2 1709 aa8.23□□□□□ -1.09
SRPRB-205ENST00000494297 DNMT1P26358 1616 aaKnown RBP8.22□□□□□ -1.09
SRPRB-205ENST00000494297 ADAMTSL3P82987 1691 aa8.22□□□□□ -1.09
SRPRB-205ENST00000494297 MLECQ14165 292 aa8.22□□□□□ -1.09
SRPRB-205ENST00000494297 REM2Q8IYK8 340 aaPredicted RBP8.22□□□□□ -1.09
SRPRB-205ENST00000494297 PLXNC1O60486 1568 aa8.22□□□□□ -1.09
SRPRB-205ENST00000494297 NCOA1Q15788 1441 aa8.21□□□□□ -1.09
SRPRB-205ENST00000494297 LHX8Q68G74 356 aa8.21□□□□□ -1.1
SRPRB-205ENST00000494297 RRP7BPQ9NSQ0 103 aa8.21□□□□□ -1.1
SRPRB-205ENST00000494297 ANKRD30AQ9BXX3 1397 aa8.21□□□□□ -1.1
SRPRB-205ENST00000494297 ADGBQ8N7X0 1667 aa8.21□□□□□ -1.1
SRPRB-205ENST00000494297 KIF3BO15066 747 aa8.2□□□□□ -1.1
SRPRB-205ENST00000494297 FXR2P51116 673 aaKnown RBP eCLIP8.2□□□□□ -1.1
SRPRB-205ENST00000494297 GGT6Q6P531 493 aa8.2□□□□□ -1.1
SRPRB-205ENST00000494297 CHIC2Q9UKJ5 165 aa8.2□□□□□ -1.1
SRPRB-205ENST00000494297 PTPRKQ15262 1439 aa8.2□□□□□ -1.1
SRPRB-205ENST00000494297 ADGRL2O95490 1459 aa8.19□□□□□ -1.1
SRPRB-205ENST00000494297 ROCK1Q13464 1354 aa8.19□□□□□ -1.1
SRPRB-205ENST00000494297 KIF15Q9NS87 1388 aa8.19□□□□□ -1.1
SRPRB-205ENST00000494297 PTPRMP28827 1452 aa8.19□□□□□ -1.1
SRPRB-205ENST00000494297 DUOX2Q9NRD8 1548 aa8.19□□□□□ -1.1
SRPRB-205ENST00000494297 ESF1Q9H501 851 aaKnown RBP8.18□□□□□ -1.1
SRPRB-205ENST00000494297 CNTLNQ9NXG0 1405 aa8.18□□□□□ -1.1
SRPRB-205ENST00000494297 CROCC2H7BZ55 1655 aa8.18□□□□□ -1.1
SRPRB-205ENST00000494297 ZMYM3Q14202 1370 aa8.17□□□□□ -1.1
SRPRB-205ENST00000494297 ERBINQ96RT1 1412 aa8.17□□□□□ -1.1
SRPRB-205ENST00000494297 MADDQ8WXG6 1647 aa8.17□□□□□ -1.1
SRPRB-205ENST00000494297 ITGAEP38570 1179 aa8.16□□□□□ -1.1
SRPRB-205ENST00000494297 WASHC2CQ9Y4E1 1318 aa8.15□□□□□ -1.1
SRPRB-205ENST00000494297 CEBPAP49715 358 aaPredicted RBP8.15□□□□□ -1.1
SRPRB-205ENST00000494297 EIF2AK4Q9P2K8 1649 aaKnown RBP8.14□□□□□ -1.11
SRPRB-205ENST00000494297 FAM135AQ9P2D6 1515 aa8.14□□□□□ -1.11
SRPRB-205ENST00000494297 ANKRD50Q9ULJ7 1429 aa8.14□□□□□ -1.11
SRPRB-205ENST00000494297 PITPNM1O00562 1244 aa8.13□□□□□ -1.11
SRPRB-205ENST00000494297 RIMS1Q86UR5 1692 aaKnown RBP8.13□□□□□ -1.11
SRPRB-205ENST00000494297 KDM5DQ9BY66 1539 aa8.13□□□□□ -1.11
SRPRB-205ENST00000494297 FER1L4A9Z1Z3 1794 aa8.12□□□□□ -1.11
SRPRB-205ENST00000494297 RNF17Q9BXT8 1623 aaKnown RBP8.12□□□□□ -1.11
SRPRB-205ENST00000494297 NPATQ14207 1427 aa8.12□□□□□ -1.11
SRPRB-205ENST00000494297 MROH2AA6NES4 1674 aa8.11□□□□□ -1.11
SRPRB-205ENST00000494297 NAIPQ13075 1403 aa8.11□□□□□ -1.11
SRPRB-205ENST00000494297 MROH1Q8NDA8 1641 aa8.11□□□□□ -1.11
SRPRB-205ENST00000494297 KANK1Q14678 1352 aa8.1□□□□□ -1.11
SRPRB-205ENST00000494297 PRDM15P57071 1507 aaPredicted RBP8.1□□□□□ -1.11
SRPRB-205ENST00000494297 FBXO31Q5XUX0 539 aaPredicted RBP8.1□□□□□ -1.11
SRPRB-205ENST00000494297 HFM1A2PYH4 1435 aa8.1□□□□□ -1.11
SRPRB-205ENST00000494297 ARHGAP31Q2M1Z3 1444 aa8.1□□□□□ -1.11
SRPRB-205ENST00000494297 DEPDC5O75140 1603 aa8.1□□□□□ -1.11
SRPRB-205ENST00000494297 VWDEQ8N2E2 1590 aa8.1□□□□□ -1.11
SRPRB-205ENST00000494297 ABCC3O15438 1527 aa8.09□□□□□ -1.11
SRPRB-205ENST00000494297 LMTK2Q8IWU2 1503 aa8.09□□□□□ -1.11
SRPRB-205ENST00000494297 C3P01024 1663 aa8.09□□□□□ -1.11
SRPRB-205ENST00000494297 CLTCQ00610 1675 aaKnown RBP8.09□□□□□ -1.11
SRPRB-205ENST00000494297 PZPP20742 1482 aa8.09□□□□□ -1.11
SRPRB-205ENST00000494297 SPDYE2BA6NHP3 402 aa8.09□□□□□ -1.11
SRPRB-205ENST00000494297 SPDYE6P0CI01 402 aa8.09□□□□□ -1.11
SRPRB-205ENST00000494297 SPDYE2Q495Y8 402 aa8.09□□□□□ -1.11
SRPRB-205ENST00000494297 CLEC11AQ9Y240 323 aa8.09□□□□□ -1.11
SRPRB-205ENST00000494297 ACIN1Q9UKV3 1341 aaKnown RBP8.08□□□□□ -1.12
SRPRB-205ENST00000494297 ZC3H13Q5T200 1668 aaKnown RBP8.08□□□□□ -1.12
SRPRB-205ENST00000494297 LMTK3Q96Q04 1460 aa8.07□□□□□ -1.12
SRPRB-205ENST00000494297 UHRF1BP1Q6BDS2 1440 aa8.07□□□□□ -1.12
SRPRB-205ENST00000494297 ZNF692Q9BU19 519 aaPredicted RBP8.07□□□□□ -1.12
SRPRB-205ENST00000494297 NUP155O75694 1391 aa8.07□□□□□ -1.12
SRPRB-205ENST00000494297 HRCP23327 699 aa8.06□□□□□ -1.12
SRPRB-205ENST00000494297 MKRN4PQ13434 485 aaPredicted RBP8.06□□□□□ -1.12
SRPRB-205ENST00000494297 TNRQ92752 1358 aa8.06□□□□□ -1.12
SRPRB-205ENST00000494297 UNC13BO14795 1591 aa8.05□□□□□ -1.12
SRPRB-205ENST00000494297 RPRD2Q5VT52 1461 aaKnown RBP8.05□□□□□ -1.12
SRPRB-205ENST00000494297 SPATA31D1Q6ZQQ2 1576 aa8.05□□□□□ -1.12
SRPRB-205ENST00000494297 SETD1BQ9UPS6 1966 aaKnown RBP8.04□□□□□ -1.12
SRPRB-205ENST00000494297 SETD5Q9C0A6 1442 aa8.04□□□□□ -1.12
SRPRB-205ENST00000494297 ERVK-7P63135 1459 aa8.04□□□□□ -1.12
SRPRB-205ENST00000494297 NOS1P29475 1434 aa8.03□□□□□ -1.12
SRPRB-205ENST00000494297 CAMSAP1Q5T5Y3 1602 aa8.03□□□□□ -1.12
SRPRB-205ENST00000494297 GCC2Q8IWJ2 1684 aa8.03□□□□□ -1.12
SRPRB-205ENST00000494297 PREX1Q8TCU6 1659 aa8.03□□□□□ -1.12
Retrieved 100 of 20,778 RNA–protein pairs in 11.6 ms