RNA–Protein interactions for RNA: ENST00000494054.1

UFD1-210, Transcript of ubiquitin recognition factor in ER associated degradation 1, humanhuman

TSL 5

Gene UFD1, Length 588 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UFD1-210ENST00000494054 PTPRTO14522 1441 aa15.26■□□□□ 0.03
UFD1-210ENST00000494054 CAMSAP1Q5T5Y3 1602 aa15.25■□□□□ 0.03
UFD1-210ENST00000494054 MYO3AQ8NEV4 1616 aa15.25■□□□□ 0.03
UFD1-210ENST00000494054 PTPN23Q9H3S7 1636 aa15.25■□□□□ 0.03
UFD1-210ENST00000494054 KDM5DQ9BY66 1539 aa15.25■□□□□ 0.03
UFD1-210ENST00000494054 FGD6Q6ZV73 1430 aa15.25■□□□□ 0.03
UFD1-210ENST00000494054 NCKAP5LQ9HCH0 1330 aa15.24■□□□□ 0.03
UFD1-210ENST00000494054 CEP170BQ9Y4F5 1589 aaPredicted RBP15.23■□□□□ 0.03
UFD1-210ENST00000494054 FAM135AQ9P2D6 1515 aa15.22■□□□□ 0.03
UFD1-210ENST00000494054 PZPP20742 1482 aa15.22■□□□□ 0.03
UFD1-210ENST00000494054 TCOF1Q13428 1488 aaKnown RBP15.22■□□□□ 0.03
UFD1-210ENST00000494054 TNRQ92752 1358 aa15.22■□□□□ 0.03
UFD1-210ENST00000494054 ZNF142P52746 1687 aaPredicted RBP15.22■□□□□ 0.03
UFD1-210ENST00000494054 RNF17Q9BXT8 1623 aaKnown RBP15.21■□□□□ 0.03
UFD1-210ENST00000494054 DAPK1P53355 1430 aa15.21■□□□□ 0.03
UFD1-210ENST00000494054 RRP7BPQ9NSQ0 103 aa15.21■□□□□ 0.03
UFD1-210ENST00000494054 A2ML1A8K2U0 1454 aa15.2■□□□□ 0.02
UFD1-210ENST00000494054 SHANK2Q9UPX8 1470 aa15.2■□□□□ 0.02
UFD1-210ENST00000494054 ABCC3O15438 1527 aa15.2■□□□□ 0.02
UFD1-210ENST00000494054 DUOX2Q9NRD8 1548 aa15.2■□□□□ 0.02
UFD1-210ENST00000494054 KIF15Q9NS87 1388 aa15.2■□□□□ 0.02
UFD1-210ENST00000494054 EIF2AK4Q9P2K8 1649 aaKnown RBP15.2■□□□□ 0.02
UFD1-210ENST00000494054 DNMT1P26358 1616 aaKnown RBP15.19■□□□□ 0.02
UFD1-210ENST00000494054 MROH1Q8NDA8 1641 aa15.19■□□□□ 0.02
UFD1-210ENST00000494054 CHIC2Q9UKJ5 165 aa15.19■□□□□ 0.02
UFD1-210ENST00000494054 PLA2R1Q13018 1463 aa15.19■□□□□ 0.02
UFD1-210ENST00000494054 CROCC2H7BZ55 1655 aa15.19■□□□□ 0.02
UFD1-210ENST00000494054 PKD2Q13563 968 aa15.17■□□□□ 0.02
UFD1-210ENST00000494054 LTBP4Q8N2S1 1624 aa15.17■□□□□ 0.02
UFD1-210ENST00000494054 FAM50AQ14320 339 aaKnown RBP15.15■□□□□ 0.02
UFD1-210ENST00000494054 ERBINQ96RT1 1412 aa15.15■□□□□ 0.02
UFD1-210ENST00000494054 ZC3H13Q5T200 1668 aaKnown RBP15.14■□□□□ 0.01
UFD1-210ENST00000494054 ANKRD30AQ9BXX3 1397 aa15.13■□□□□ 0.01
UFD1-210ENST00000494054 CEP152O94986 1710 aa15.13■□□□□ 0.01
UFD1-210ENST00000494054 GRWD1Q9BQ67 446 aaKnown RBP eCLIP15.13■□□□□ 0.016e-6■□□□□ 11
UFD1-210ENST00000494054 ZNF335Q9H4Z2 1342 aaPredicted RBP15.13■□□□□ 0.01
UFD1-210ENST00000494054 SPATA31D1Q6ZQQ2 1576 aa15.12■□□□□ 0.01
UFD1-210ENST00000494054 ERVK-7P63135 1459 aa15.12■□□□□ 0.01
UFD1-210ENST00000494054 NLRP1Q9C000 1473 aa15.12■□□□□ 0.01
UFD1-210ENST00000494054 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP15.11■□□□□ 0.01
UFD1-210ENST00000494054 THEMISQ8N1K5 641 aaPredicted RBP15.11■□□□□ 0.01
UFD1-210ENST00000494054 PRDM15P57071 1507 aaPredicted RBP15.11■□□□□ 0.01
UFD1-210ENST00000494054 PPARGC1BQ86YN6 1023 aaKnown RBP15.1■□□□□ 0.01
UFD1-210ENST00000494054 UGGT1Q9NYU2 1555 aa15.1■□□□□ 0.01
UFD1-210ENST00000494054 NEURL4Q96JN8 1562 aa15.09■□□□□ 0.01
UFD1-210ENST00000494054 DEPDC5O75140 1603 aa15.09■□□□□ 0.01
UFD1-210ENST00000494054 ADGRL2O95490 1459 aa15.08■□□□□ 0.01
UFD1-210ENST00000494054 CFAP65Q6ZU64 1925 aaKnown RBP15.08■□□□□ 0
UFD1-210ENST00000494054 ANKLE2Q86XL3 938 aa15.08■□□□□ 0
UFD1-210ENST00000494054 ARHGAP31Q2M1Z3 1444 aa15.08■□□□□ 0
UFD1-210ENST00000494054 KANK1Q14678 1352 aa15.06■□□□□ 0
UFD1-210ENST00000494054 POLR1AO95602 1720 aaPredicted RBP15.06■□□□□ 0
UFD1-210ENST00000494054 IQSEC2Q5JU85 1478 aa15.05■□□□□ -0
UFD1-210ENST00000494054 VWDEQ8N2E2 1590 aa15.05■□□□□ -0
UFD1-210ENST00000494054 LMTK2Q8IWU2 1503 aa15.03■□□□□ -0
UFD1-210ENST00000494054 MED14O60244 1454 aa15.03■□□□□ -0
UFD1-210ENST00000494054 NPHP4O75161 1426 aaPredicted RBP15.03■□□□□ -0
UFD1-210ENST00000494054 ANKRD50Q9ULJ7 1429 aa15.03■□□□□ -0
UFD1-210ENST00000494054 UBR1Q8IWV7 1749 aa15.01□□□□□ -0.01
UFD1-210ENST00000494054 LTKP29376 864 aa14.99□□□□□ -0.01
UFD1-210ENST00000494054 ITGAEP38570 1179 aa14.99□□□□□ -0.01
UFD1-210ENST00000494054 IDI1Q13907 227 aa14.99□□□□□ -0.01
UFD1-210ENST00000494054 EFCAB6Q5THR3 1501 aa14.98□□□□□ -0.01
UFD1-210ENST00000494054 ARHGAP23Q9P227 1491 aa14.98□□□□□ -0.01
UFD1-210ENST00000494054 UBAP1LF5GYI3 381 aa14.98□□□□□ -0.01
UFD1-210ENST00000494054 PIK3C2BO00750 1634 aa14.98□□□□□ -0.01
UFD1-210ENST00000494054 ROCK1Q13464 1354 aa14.98□□□□□ -0.01
UFD1-210ENST00000494054 TXNDC2Q86VQ3 553 aa14.97□□□□□ -0.01
UFD1-210ENST00000494054 NOS1P29475 1434 aa14.97□□□□□ -0.01
UFD1-210ENST00000494054 SYNMO15061 1565 aa14.97□□□□□ -0.01
UFD1-210ENST00000494054 SLIT1O75093 1534 aa14.97□□□□□ -0.01
UFD1-210ENST00000494054 IQGAP1P46940 1657 aa14.97□□□□□ -0.01
UFD1-210ENST00000494054 SCAF11Q99590 1463 aaKnown RBP14.95□□□□□ -0.02
UFD1-210ENST00000494054 STAG3Q9UJ98 1225 aa14.95□□□□□ -0.02
UFD1-210ENST00000494054 CPS1P31327 1500 aa14.95□□□□□ -0.02
UFD1-210ENST00000494054 TMEM2Q9UHN6 1383 aa14.95□□□□□ -0.02
UFD1-210ENST00000494054 UNC13BO14795 1591 aa14.94□□□□□ -0.02
UFD1-210ENST00000494054 ILDR2Q71H61 639 aa14.92□□□□□ -0.02
UFD1-210ENST00000494054 SLC52A1Q9NWF4 448 aa14.92□□□□□ -0.02
UFD1-210ENST00000494054 EID1Q9Y6B2 187 aa14.92□□□□□ -0.02
UFD1-210ENST00000494054 RPRD2Q5VT52 1461 aaKnown RBP14.92□□□□□ -0.02
UFD1-210ENST00000494054 TET3O43151 1660 aa14.92□□□□□ -0.02
UFD1-210ENST00000494054 STRCP1A6NGW2 1772 aa14.92□□□□□ -0.02
UFD1-210ENST00000494054 RRBP1Q9P2E9 1410 aaKnown RBP14.9□□□□□ -0.02
UFD1-210ENST00000494054 KDM5AP29375 1690 aaKnown RBP14.9□□□□□ -0.02
UFD1-210ENST00000494054 NUP155O75694 1391 aa14.89□□□□□ -0.03
UFD1-210ENST00000494054 ADGRB3O60242 1522 aa14.89□□□□□ -0.03
UFD1-210ENST00000494054 LRRC7Q96NW7 1537 aa14.89□□□□□ -0.03
UFD1-210ENST00000494054 GCC2Q8IWJ2 1684 aa14.88□□□□□ -0.03
UFD1-210ENST00000494054 IQGAP3Q86VI3 1631 aa14.88□□□□□ -0.03
UFD1-210ENST00000494054 TOM1O60784 492 aa14.87□□□□□ -0.03
UFD1-210ENST00000494054 PIP4K2BP78356 416 aa14.87□□□□□ -0.03
UFD1-210ENST00000494054 E9PCH4 1651 aa14.87□□□□□ -0.03
UFD1-210ENST00000494054 SOCS7O14512 581 aa14.86□□□□□ -0.03
UFD1-210ENST00000494054 SLC26A8Q96RN1 970 aa14.86□□□□□ -0.03
UFD1-210ENST00000494054 ALKQ9UM73 1620 aa14.85□□□□□ -0.03
UFD1-210ENST00000494054 SCAF1Q9H7N4 1312 aaKnown RBP14.85□□□□□ -0.03
UFD1-210ENST00000494054 SENP3Q9H4L4 574 aaPredicted RBP14.84□□□□□ -0.03
UFD1-210ENST00000494054 ZFYVE9O95405 1425 aa14.83□□□□□ -0.03
UFD1-210ENST00000494054 CHGAP10645 457 aaKnown RBP14.83□□□□□ -0.04
Retrieved 100 of 20,778 RNA–protein pairs in 14.1 ms