RNA–Protein interactions for RNA: ENST00000493699.1

HLA-E-203, Transcript of major histocompatibility complex, class I, E, humanhuman

Gene HLA-E, Length 907 nt, Biotype retained intron, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-E-203ENST00000493699 ABCC5O15440 1437 aa34.38■■■■□ 3.09
HLA-E-203ENST00000493699 NCOA1Q15788 1441 aa34.37■■■■□ 3.09
HLA-E-203ENST00000493699 TCOF1Q13428 1488 aaKnown RBP34.36■■■■□ 3.09
HLA-E-203ENST00000493699 PTPRTO14522 1441 aa34.35■■■■□ 3.09
HLA-E-203ENST00000493699 MYO3AQ8NEV4 1616 aa34.33■■■■□ 3.09
HLA-E-203ENST00000493699 SHANK2Q9UPX8 1470 aa34.33■■■■□ 3.09
HLA-E-203ENST00000493699 FBXO31Q5XUX0 539 aaPredicted RBP34.33■■■■□ 3.09
HLA-E-203ENST00000493699 CAMSAP1Q5T5Y3 1602 aa34.32■■■■□ 3.08
HLA-E-203ENST00000493699 RNF17Q9BXT8 1623 aaKnown RBP34.32■■■■□ 3.08
HLA-E-203ENST00000493699 PZPP20742 1482 aa34.32■■■■□ 3.08
HLA-E-203ENST00000493699 ZNF142P52746 1687 aaPredicted RBP34.31■■■■□ 3.08
HLA-E-203ENST00000493699 DAPK1P53355 1430 aa34.3■■■■□ 3.08
HLA-E-203ENST00000493699 CERKQ8TCT0 537 aa34.3■■■■□ 3.08
HLA-E-203ENST00000493699 CEP170BQ9Y4F5 1589 aaPredicted RBP34.3■■■■□ 3.08
HLA-E-203ENST00000493699 EIF2AK4Q9P2K8 1649 aaKnown RBP34.3■■■■□ 3.08
HLA-E-203ENST00000493699 DUOX2Q9NRD8 1548 aa34.3■■■■□ 3.08
HLA-E-203ENST00000493699 CROCC2H7BZ55 1655 aa34.28■■■■□ 3.08
HLA-E-203ENST00000493699 DNMT1P26358 1616 aaKnown RBP34.27■■■■□ 3.08
HLA-E-203ENST00000493699 KIF15Q9NS87 1388 aa34.26■■■■□ 3.08
HLA-E-203ENST00000493699 RRP7BPQ9NSQ0 103 aa34.25■■■■□ 3.07
HLA-E-203ENST00000493699 TNRQ92752 1358 aa34.24■■■■□ 3.07
HLA-E-203ENST00000493699 A2ML1A8K2U0 1454 aa34.24■■■■□ 3.07
HLA-E-203ENST00000493699 MROH1Q8NDA8 1641 aa34.23■■■■□ 3.07
HLA-E-203ENST00000493699 PLA2R1Q13018 1463 aa34.23■■■■□ 3.07
HLA-E-203ENST00000493699 ABCC3O15438 1527 aa34.22■■■■□ 3.07
HLA-E-203ENST00000493699 NCKAP5LQ9HCH0 1330 aa34.22■■■■□ 3.07
HLA-E-203ENST00000493699 PKD2Q13563 968 aa34.19■■■■□ 3.06
HLA-E-203ENST00000493699 ERBINQ96RT1 1412 aa34.19■■■■□ 3.06
HLA-E-203ENST00000493699 ZC3H13Q5T200 1668 aaKnown RBP34.18■■■■□ 3.06
HLA-E-203ENST00000493699 CHIC2Q9UKJ5 165 aa34.17■■■■□ 3.06
HLA-E-203ENST00000493699 ANKRD30AQ9BXX3 1397 aa34.14■■■■□ 3.06
HLA-E-203ENST00000493699 FAM50AQ14320 339 aaKnown RBP34.11■■■■□ 3.05
HLA-E-203ENST00000493699 NLRP1Q9C000 1473 aa34.11■■■■□ 3.05
HLA-E-203ENST00000493699 PRDM15P57071 1507 aaPredicted RBP34.1■■■■□ 3.05
HLA-E-203ENST00000493699 LTBP4Q8N2S1 1624 aa34.09■■■■□ 3.05
HLA-E-203ENST00000493699 SPATA31D1Q6ZQQ2 1576 aa34.08■■■■□ 3.05
HLA-E-203ENST00000493699 ADGRL2O95490 1459 aa34.07■■■■□ 3.05
HLA-E-203ENST00000493699 CEP152O94986 1710 aa34.07■■■■□ 3.04
HLA-E-203ENST00000493699 THEMISQ8N1K5 641 aaPredicted RBP34.05■■■■□ 3.04
HLA-E-203ENST00000493699 ERVK-7P63135 1459 aa34.05■■■■□ 3.04
HLA-E-203ENST00000493699 DEPDC5O75140 1603 aa34.04■■■■□ 3.04
HLA-E-203ENST00000493699 ARHGAP31Q2M1Z3 1444 aa34.04■■■■□ 3.04
HLA-E-203ENST00000493699 GRWD1Q9BQ67 446 aaKnown RBP eCLIP34.02■■■■□ 3.04
HLA-E-203ENST00000493699 UGGT1Q9NYU2 1555 aa34.02■■■■□ 3.04
HLA-E-203ENST00000493699 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP34.01■■■■□ 3.04
HLA-E-203ENST00000493699 ZNF335Q9H4Z2 1342 aaPredicted RBP33.99■■■■□ 3.03
HLA-E-203ENST00000493699 KANK1Q14678 1352 aa33.97■■■■□ 3.03
HLA-E-203ENST00000493699 ANKLE2Q86XL3 938 aa33.96■■■■□ 3.03
HLA-E-203ENST00000493699 CFAP65Q6ZU64 1925 aaKnown RBP33.96■■■■□ 3.03
HLA-E-203ENST00000493699 VWDEQ8N2E2 1590 aa33.95■■■■□ 3.03
HLA-E-203ENST00000493699 NEURL4Q96JN8 1562 aa33.95■■■■□ 3.03
HLA-E-203ENST00000493699 LMTK2Q8IWU2 1503 aa33.94■■■■□ 3.02
HLA-E-203ENST00000493699 POLR1AO95602 1720 aaPredicted RBP33.93■■■■□ 3.02
HLA-E-203ENST00000493699 PPARGC1BQ86YN6 1023 aaKnown RBP33.92■■■■□ 3.02
HLA-E-203ENST00000493699 IQSEC2Q5JU85 1478 aa33.91■■■■□ 3.02
HLA-E-203ENST00000493699 ANKRD50Q9ULJ7 1429 aa33.91■■■■□ 3.02
HLA-E-203ENST00000493699 MED14O60244 1454 aa33.88■■■■□ 3.01
HLA-E-203ENST00000493699 UBR1Q8IWV7 1749 aa33.83■■■■□ 3.01
HLA-E-203ENST00000493699 ROCK1Q13464 1354 aa33.83■■■■□ 3.01
HLA-E-203ENST00000493699 NPHP4O75161 1426 aaPredicted RBP33.81■■■■□ 3
HLA-E-203ENST00000493699 EFCAB6Q5THR3 1501 aa33.79■■■■□ 3
HLA-E-203ENST00000493699 NOS1P29475 1434 aa33.77■■■■□ 3
HLA-E-203ENST00000493699 ARHGAP23Q9P227 1491 aa33.76■■■□□ 2.99
HLA-E-203ENST00000493699 IDI1Q13907 227 aa33.75■■■□□ 2.99
HLA-E-203ENST00000493699 SLIT1O75093 1534 aa33.74■■■□□ 2.99
HLA-E-203ENST00000493699 LTKP29376 864 aa33.73■■■□□ 2.99
HLA-E-203ENST00000493699 PIK3C2BO00750 1634 aa33.72■■■□□ 2.99
HLA-E-203ENST00000493699 ITGAEP38570 1179 aa33.72■■■□□ 2.99
HLA-E-203ENST00000493699 SYNMO15061 1565 aa33.72■■■□□ 2.99
HLA-E-203ENST00000493699 IQGAP1P46940 1657 aa33.71■■■□□ 2.99
HLA-E-203ENST00000493699 RPRD2Q5VT52 1461 aaKnown RBP33.69■■■□□ 2.98
HLA-E-203ENST00000493699 SCAF11Q99590 1463 aaKnown RBP33.69■■■□□ 2.98
HLA-E-203ENST00000493699 CPS1P31327 1500 aa33.69■■■□□ 2.98
HLA-E-203ENST00000493699 TXNDC2Q86VQ3 553 aa33.69■■■□□ 2.98
HLA-E-203ENST00000493699 UNC13BO14795 1591 aa33.68■■■□□ 2.98
HLA-E-203ENST00000493699 SLC52A1Q9NWF4 448 aa33.67■■■□□ 2.98
HLA-E-203ENST00000493699 TMEM2Q9UHN6 1383 aa33.67■■■□□ 2.98
HLA-E-203ENST00000493699 KDM5AP29375 1690 aaKnown RBP33.65■■■□□ 2.98
HLA-E-203ENST00000493699 RRBP1Q9P2E9 1410 aaKnown RBP33.65■■■□□ 2.98
HLA-E-203ENST00000493699 STAG3Q9UJ98 1225 aa33.65■■■□□ 2.98
HLA-E-203ENST00000493699 TET3O43151 1660 aa33.64■■■□□ 2.98
HLA-E-203ENST00000493699 EID1Q9Y6B2 187 aa33.64■■■□□ 2.98
HLA-E-203ENST00000493699 UBAP1LF5GYI3 381 aa33.63■■■□□ 2.97
HLA-E-203ENST00000493699 GCC2Q8IWJ2 1684 aa33.58■■■□□ 2.97
HLA-E-203ENST00000493699 IQGAP3Q86VI3 1631 aa33.56■■■□□ 2.96
HLA-E-203ENST00000493699 ADGRB3O60242 1522 aa33.55■■■□□ 2.96
HLA-E-203ENST00000493699 NUP155O75694 1391 aa33.55■■■□□ 2.96
HLA-E-203ENST00000493699 STRCP1A6NGW2 1772 aa33.55■■■□□ 2.96
HLA-E-203ENST00000493699 E9PCH4 1651 aa33.52■■■□□ 2.96
HLA-E-203ENST00000493699 LRRC7Q96NW7 1537 aa33.48■■■□□ 2.95
HLA-E-203ENST00000493699 TOM1O60784 492 aa33.47■■■□□ 2.95
HLA-E-203ENST00000493699 TMEM131LA2VDJ0 1609 aa33.43■■■□□ 2.94
HLA-E-203ENST00000493699 ZFYVE9O95405 1425 aa33.43■■■□□ 2.94
HLA-E-203ENST00000493699 NAIPQ13075 1403 aa33.43■■■□□ 2.94
HLA-E-203ENST00000493699 ALKQ9UM73 1620 aa33.39■■■□□ 2.94
HLA-E-203ENST00000493699 SLC26A8Q96RN1 970 aa33.39■■■□□ 2.94
HLA-E-203ENST00000493699 MYO5BQ9ULV0 1848 aa33.39■■■□□ 2.94
HLA-E-203ENST00000493699 PIP4K2BP78356 416 aa33.38■■■□□ 2.93
HLA-E-203ENST00000493699 RIMS2Q9UQ26 1411 aa33.36■■■□□ 2.93
HLA-E-203ENST00000493699 HDGFP51858 240 aaKnown RBP33.36■■■□□ 2.93
Retrieved 100 of 20,778 RNA–protein pairs in 77.9 ms