RNA–Protein interactions for RNA: ENST00000493590.1

NECAB3-214, Transcript of N-terminal EF-hand calcium binding protein 3, humanhuman

TSL 5

Gene NECAB3, Length 625 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NECAB3-214ENST00000493590 CCNB3Q8WWL7 1395 aa27.22■■□□□ 1.95
NECAB3-214ENST00000493590 TNRQ92752 1358 aa27.22■■□□□ 1.95
NECAB3-214ENST00000493590 FBXO31Q5XUX0 539 aaPredicted RBP27.21■■□□□ 1.95
NECAB3-214ENST00000493590 VWDEQ8N2E2 1590 aa27.19■■□□□ 1.94
NECAB3-214ENST00000493590 ALKQ9UM73 1620 aa27.18■■□□□ 1.94
NECAB3-214ENST00000493590 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP27.18■■□□□ 1.945e-7■■■■■ 29.7
NECAB3-214ENST00000493590 ANKLE2Q86XL3 938 aa27.17■■□□□ 1.94
NECAB3-214ENST00000493590 ZNF644Q9H582 1327 aaPredicted RBP27.15■■□□□ 1.94
NECAB3-214ENST00000493590 NPHP4O75161 1426 aaPredicted RBP27.13■■□□□ 1.93
NECAB3-214ENST00000493590 PZPP20742 1482 aa27.13■■□□□ 1.93
NECAB3-214ENST00000493590 KDM5DQ9BY66 1539 aa27.11■■□□□ 1.93
NECAB3-214ENST00000493590 KIF3BO15066 747 aa27.11■■□□□ 1.93
NECAB3-214ENST00000493590 DHX29Q7Z478 1369 aaKnown RBP27.09■■□□□ 1.93
NECAB3-214ENST00000493590 THEMISQ8N1K5 641 aaPredicted RBP27.09■■□□□ 1.93
NECAB3-214ENST00000493590 UGGT1Q9NYU2 1555 aa27.09■■□□□ 1.93
NECAB3-214ENST00000493590 MTUS2Q5JR59 1369 aa27.09■■□□□ 1.93
NECAB3-214ENST00000493590 IQGAP1P46940 1657 aa27.08■■□□□ 1.93
NECAB3-214ENST00000493590 FAM135AQ9P2D6 1515 aa27.07■■□□□ 1.92
NECAB3-214ENST00000493590 DEPDC5O75140 1603 aa27.07■■□□□ 1.92
NECAB3-214ENST00000493590 WASHC2CQ9Y4E1 1318 aa27.07■■□□□ 1.92
NECAB3-214ENST00000493590 TIAM1Q13009 1591 aa27.06■■□□□ 1.92
NECAB3-214ENST00000493590 STRCP1A6NGW2 1772 aa27.06■■□□□ 1.92
NECAB3-214ENST00000493590 MBD5Q9P267 1494 aa27.06■■□□□ 1.92
NECAB3-214ENST00000493590 RNF17Q9BXT8 1623 aaKnown RBP27.05■■□□□ 1.92
NECAB3-214ENST00000493590 RTEL1-TNFRSF6BF6WH68 1400 aa27.05■■□□□ 1.92
NECAB3-214ENST00000493590 MED14O60244 1454 aa27.05■■□□□ 1.92
NECAB3-214ENST00000493590 MIA2Q96PC5 1412 aa27.04■■□□□ 1.92
NECAB3-214ENST00000493590 NLRP1Q9C000 1473 aa27.04■■□□□ 1.92
NECAB3-214ENST00000493590 LRRC7Q96NW7 1537 aa27.03■■□□□ 1.92
NECAB3-214ENST00000493590 SYNMO15061 1565 aa27.01■■□□□ 1.91
NECAB3-214ENST00000493590 RGS17Q9UGC6 210 aaPredicted RBP26.98■■□□□ 1.91
NECAB3-214ENST00000493590 CHIC1Q5VXU3 224 aa26.96■■□□□ 1.91
NECAB3-214ENST00000493590 CCDC141Q6ZP82 1450 aa26.94■■□□□ 1.9
NECAB3-214ENST00000493590 EHBP1L1Q8N3D4 1523 aa26.93■■□□□ 1.9
NECAB3-214ENST00000493590 CAMSAP2Q08AD1 1489 aa26.89■■□□□ 1.9
NECAB3-214ENST00000493590 ZC3H13Q5T200 1668 aaKnown RBP26.89■■□□□ 1.89
NECAB3-214ENST00000493590 CEP162Q5TB80 1403 aa26.85■■□□□ 1.89
NECAB3-214ENST00000493590 ABCC3O15438 1527 aa26.83■■□□□ 1.89
NECAB3-214ENST00000493590 ERVK-7P63135 1459 aa26.82■■□□□ 1.88
NECAB3-214ENST00000493590 XIRP1Q702N8 1843 aaKnown RBP26.82■■□□□ 1.88
NECAB3-214ENST00000493590 POTEAQ6S8J7 498 aa26.82■■□□□ 1.88
NECAB3-214ENST00000493590 UBR1Q8IWV7 1749 aa26.82■■□□□ 1.88
NECAB3-214ENST00000493590 SCAF11Q99590 1463 aaKnown RBP26.81■■□□□ 1.88
NECAB3-214ENST00000493590 CFAP65Q6ZU64 1925 aaKnown RBP26.8■■□□□ 1.88
NECAB3-214ENST00000493590 RSPH4AQ5TD94 716 aa26.79■■□□□ 1.88
NECAB3-214ENST00000493590 TSPY4P0CV99 314 aa26.78■■□□□ 1.88
NECAB3-214ENST00000493590 TSPY10P0CW01 314 aa26.78■■□□□ 1.88
NECAB3-214ENST00000493590 CEP152O94986 1710 aa26.76■■□□□ 1.88
NECAB3-214ENST00000493590 NCOA2Q15596 1464 aa26.76■■□□□ 1.87
NECAB3-214ENST00000493590 SETD1AO15047 1707 aaKnown RBP26.76■■□□□ 1.87
NECAB3-214ENST00000493590 TXNDC2Q86VQ3 553 aa26.75■■□□□ 1.87
NECAB3-214ENST00000493590 ARHGEF5Q12774 1597 aa26.75■■□□□ 1.87
NECAB3-214ENST00000493590 LTKP29376 864 aa26.74■■□□□ 1.87
NECAB3-214ENST00000493590 FAM135BQ49AJ0 1406 aa26.71■■□□□ 1.87
NECAB3-214ENST00000493590 ROBO1Q9Y6N7 1651 aa26.7■■□□□ 1.86
NECAB3-214ENST00000493590 MROH1Q8NDA8 1641 aa26.68■■□□□ 1.86
NECAB3-214ENST00000493590 EIF2AK4Q9P2K8 1649 aaKnown RBP26.68■■□□□ 1.86
NECAB3-214ENST00000493590 EID1Q9Y6B2 187 aa26.68■■□□□ 1.86
NECAB3-214ENST00000493590 SLIT1O75093 1534 aa26.68■■□□□ 1.86
NECAB3-214ENST00000493590 ARHGAP23Q9P227 1491 aa26.68■■□□□ 1.86
NECAB3-214ENST00000493590 TMEM94Q12767 1356 aa26.66■■□□□ 1.86
NECAB3-214ENST00000493590 RBM33Q96EV2 1170 aaKnown RBP26.64■■□□□ 1.86
NECAB3-214ENST00000493590 MAST1Q9Y2H9 1570 aa26.63■■□□□ 1.85
NECAB3-214ENST00000493590 PIK3C2BO00750 1634 aa26.61■■□□□ 1.85
NECAB3-214ENST00000493590 STAG3Q9UJ98 1225 aa26.6■■□□□ 1.85
NECAB3-214ENST00000493590 PROSER2Q86WR7 435 aaPredicted RBP26.58■■□□□ 1.85
NECAB3-214ENST00000493590 MAP3K1Q13233 1512 aa26.58■■□□□ 1.85
NECAB3-214ENST00000493590 PHLPP1O60346 1717 aa26.56■■□□□ 1.84
NECAB3-214ENST00000493590 TMEM2Q9UHN6 1383 aa26.56■■□□□ 1.84
NECAB3-214ENST00000493590 LRRC9Q6ZRR7 1453 aa26.55■■□□□ 1.84
NECAB3-214ENST00000493590 KCNA6P17658 529 aa26.54■■□□□ 1.84
NECAB3-214ENST00000493590 SLC26A8Q96RN1 970 aa26.54■■□□□ 1.84
NECAB3-214ENST00000493590 DUOX2Q9NRD8 1548 aa26.53■■□□□ 1.84
NECAB3-214ENST00000493590 ARHGAP31Q2M1Z3 1444 aa26.51■■□□□ 1.83
NECAB3-214ENST00000493590 GRWD1Q9BQ67 446 aaKnown RBP eCLIP26.51■■□□□ 1.832e-10■■□□□ 12.2
NECAB3-214ENST00000493590 PRDM15P57071 1507 aaPredicted RBP26.5■■□□□ 1.83
NECAB3-214ENST00000493590 EFCAB6Q5THR3 1501 aa26.5■■□□□ 1.83
NECAB3-214ENST00000493590 JCADQ9P266 1359 aa26.49■■□□□ 1.83
NECAB3-214ENST00000493590 MSH6P52701 1360 aa26.48■■□□□ 1.83
NECAB3-214ENST00000493590 BCANQ96GW7 911 aa26.47■■□□□ 1.83
NECAB3-214ENST00000493590 TRIM52Q96A61 297 aa26.46■■□□□ 1.83
NECAB3-214ENST00000493590 TET3O43151 1660 aa26.45■■□□□ 1.82
NECAB3-214ENST00000493590 NKTRP30414 1462 aaKnown RBP26.45■■□□□ 1.82
NECAB3-214ENST00000493590 MEX3CQ5U5Q3 659 aaKnown RBP26.45■■□□□ 1.82
NECAB3-214ENST00000493590 SLAIN2Q9P270 581 aa26.45■■□□□ 1.82
NECAB3-214ENST00000493590 KIF15Q9NS87 1388 aa26.45■■□□□ 1.82
NECAB3-214ENST00000493590 UPF1Q92900 1129 aaKnown RBP eCLIP26.44■■□□□ 1.82
NECAB3-214ENST00000493590 NWD1Q149M9 1564 aa26.43■■□□□ 1.82
NECAB3-214ENST00000493590 KDM5AP29375 1690 aaKnown RBP26.42■■□□□ 1.82
NECAB3-214ENST00000493590 IDI1Q13907 227 aa26.42■■□□□ 1.82
NECAB3-214ENST00000493590 RRP7BPQ9NSQ0 103 aa26.42■■□□□ 1.82
NECAB3-214ENST00000493590 ERBINQ96RT1 1412 aa26.4■■□□□ 1.82
NECAB3-214ENST00000493590 LRP6O75581 1613 aa26.4■■□□□ 1.82
NECAB3-214ENST00000493590 COL16A1Q07092 1604 aaPredicted RBP26.4■■□□□ 1.82
NECAB3-214ENST00000493590 KANK1Q14678 1352 aa26.4■■□□□ 1.82
NECAB3-214ENST00000493590 MYOM3Q5VTT5 1437 aa26.39■■□□□ 1.82
NECAB3-214ENST00000493590 ADGRB3O60242 1522 aa26.36■■□□□ 1.81
NECAB3-214ENST00000493590 CROCC2H7BZ55 1655 aa26.36■■□□□ 1.81
NECAB3-214ENST00000493590 ZNF772Q68DY9 489 aaPredicted RBP26.36■■□□□ 1.81
NECAB3-214ENST00000493590 SPATA31A6Q5VVP1 1343 aa26.33■■□□□ 1.81
Retrieved 100 of 20,778 RNA–protein pairs in 125.3 ms