RNA–Protein interactions for RNA: ENST00000493564.1

SGIP1-213, Transcript of SH3 domain GRB2 like endophilin interacting protein 1, humanhuman

TSL 3

Gene SGIP1, Length 525 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SGIP1-213ENST00000493564 GRWD1Q9BQ67 446 aaKnown RBP eCLIP14.49□□□□□ -0.09
SGIP1-213ENST00000493564 DNMT1P26358 1616 aaKnown RBP14.48□□□□□ -0.09
SGIP1-213ENST00000493564 ANKRD30AQ9BXX3 1397 aa14.47□□□□□ -0.09
SGIP1-213ENST00000493564 SHANK2Q9UPX8 1470 aa14.45□□□□□ -0.1
SGIP1-213ENST00000493564 PTPRKQ15262 1439 aa14.45□□□□□ -0.1
SGIP1-213ENST00000493564 SETD1BQ9UPS6 1966 aaKnown RBP14.45□□□□□ -0.1
SGIP1-213ENST00000493564 DUOX2Q9NRD8 1548 aa14.45□□□□□ -0.1
SGIP1-213ENST00000493564 NCOA1Q15788 1441 aa14.44□□□□□ -0.1
SGIP1-213ENST00000493564 UHRF1BP1Q6BDS2 1440 aa14.44□□□□□ -0.1
SGIP1-213ENST00000493564 CROCC2H7BZ55 1655 aa14.44□□□□□ -0.1
SGIP1-213ENST00000493564 MROH2AA6NES4 1674 aa14.42□□□□□ -0.1
SGIP1-213ENST00000493564 PREX1Q8TCU6 1659 aa14.42□□□□□ -0.1
SGIP1-213ENST00000493564 KDM5DQ9BY66 1539 aa14.4□□□□□ -0.1
SGIP1-213ENST00000493564 NPATQ14207 1427 aa14.4□□□□□ -0.1
SGIP1-213ENST00000493564 ERBINQ96RT1 1412 aa14.39□□□□□ -0.11
SGIP1-213ENST00000493564 ADGRL2O95490 1459 aa14.38□□□□□ -0.11
SGIP1-213ENST00000493564 RNF17Q9BXT8 1623 aaKnown RBP14.37□□□□□ -0.11
SGIP1-213ENST00000493564 TNRQ92752 1358 aa14.37□□□□□ -0.11
SGIP1-213ENST00000493564 ABCC3O15438 1527 aa14.37□□□□□ -0.11
SGIP1-213ENST00000493564 NCKAP5LQ9HCH0 1330 aa14.37□□□□□ -0.11
SGIP1-213ENST00000493564 EIF2AK4Q9P2K8 1649 aaKnown RBP14.37□□□□□ -0.11
SGIP1-213ENST00000493564 ANKRD50Q9ULJ7 1429 aa14.36□□□□□ -0.11
SGIP1-213ENST00000493564 CFAP65Q6ZU64 1925 aaKnown RBP14.36□□□□□ -0.11
SGIP1-213ENST00000493564 MROH1Q8NDA8 1641 aa14.36□□□□□ -0.11
SGIP1-213ENST00000493564 PZPP20742 1482 aa14.36□□□□□ -0.11
SGIP1-213ENST00000493564 KANK1Q14678 1352 aa14.35□□□□□ -0.11
SGIP1-213ENST00000493564 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP14.34□□□□□ -0.11
SGIP1-213ENST00000493564 RRBP1Q9P2E9 1410 aaKnown RBP14.33□□□□□ -0.11
SGIP1-213ENST00000493564 CEP152O94986 1710 aa14.33□□□□□ -0.12
SGIP1-213ENST00000493564 DMRT2Q9Y5R5 561 aa14.33□□□□□ -0.12
SGIP1-213ENST00000493564 ROCK1Q13464 1354 aa14.32□□□□□ -0.12
SGIP1-213ENST00000493564 STRCQ7RTU9 1775 aa14.32□□□□□ -0.12
SGIP1-213ENST00000493564 FAM135AQ9P2D6 1515 aa14.31□□□□□ -0.12
SGIP1-213ENST00000493564 CAMSAP1Q5T5Y3 1602 aa14.31□□□□□ -0.12
SGIP1-213ENST00000493564 MYO3AQ8NEV4 1616 aa14.31□□□□□ -0.12
SGIP1-213ENST00000493564 A2ML1A8K2U0 1454 aa14.3□□□□□ -0.12
SGIP1-213ENST00000493564 PRDM15P57071 1507 aaPredicted RBP14.3□□□□□ -0.12
SGIP1-213ENST00000493564 CEP170BQ9Y4F5 1589 aaPredicted RBP14.3□□□□□ -0.12
SGIP1-213ENST00000493564 THEMISQ8N1K5 641 aaPredicted RBP14.29□□□□□ -0.12
SGIP1-213ENST00000493564 ERVK-7P63135 1459 aa14.29□□□□□ -0.12
SGIP1-213ENST00000493564 ZC3H13Q5T200 1668 aaKnown RBP14.29□□□□□ -0.12
SGIP1-213ENST00000493564 DEPDC5O75140 1603 aa14.28□□□□□ -0.12
SGIP1-213ENST00000493564 ARHGAP31Q2M1Z3 1444 aa14.26□□□□□ -0.13
SGIP1-213ENST00000493564 NUP155O75694 1391 aa14.26□□□□□ -0.13
SGIP1-213ENST00000493564 PKD2Q13563 968 aa14.26□□□□□ -0.13
SGIP1-213ENST00000493564 IDI1Q13907 227 aa14.26□□□□□ -0.13
SGIP1-213ENST00000493564 ILDR1Q86SU0 546 aaPredicted RBP14.26□□□□□ -0.13
SGIP1-213ENST00000493564 ANKLE2Q86XL3 938 aa14.25□□□□□ -0.13
SGIP1-213ENST00000493564 STAG3Q9UJ98 1225 aa14.25□□□□□ -0.13
SGIP1-213ENST00000493564 SPATA31D1Q6ZQQ2 1576 aa14.25□□□□□ -0.13
SGIP1-213ENST00000493564 VWDEQ8N2E2 1590 aa14.25□□□□□ -0.13
SGIP1-213ENST00000493564 NLRP1Q9C000 1473 aa14.25□□□□□ -0.13
SGIP1-213ENST00000493564 ZNF142P52746 1687 aaPredicted RBP14.24□□□□□ -0.13
SGIP1-213ENST00000493564 UGGT1Q9NYU2 1555 aa14.24□□□□□ -0.13
SGIP1-213ENST00000493564 PTPRTO14522 1441 aa14.24□□□□□ -0.13
SGIP1-213ENST00000493564 LMTK2Q8IWU2 1503 aa14.23□□□□□ -0.13
SGIP1-213ENST00000493564 CERKQ8TCT0 537 aa14.22□□□□□ -0.13
SGIP1-213ENST00000493564 TRIM52Q96A61 297 aa14.22□□□□□ -0.13
SGIP1-213ENST00000493564 NAIPQ13075 1403 aa14.22□□□□□ -0.13
SGIP1-213ENST00000493564 PLA2R1Q13018 1463 aa14.21□□□□□ -0.13
SGIP1-213ENST00000493564 LTKP29376 864 aa14.2□□□□□ -0.14
SGIP1-213ENST00000493564 TXNDC2Q86VQ3 553 aa14.2□□□□□ -0.14
SGIP1-213ENST00000493564 EFCAB6Q5THR3 1501 aa14.2□□□□□ -0.14
SGIP1-213ENST00000493564 ZNF335Q9H4Z2 1342 aaPredicted RBP14.19□□□□□ -0.14
SGIP1-213ENST00000493564 UNC13BO14795 1591 aa14.19□□□□□ -0.14
SGIP1-213ENST00000493564 CHGAP10645 457 aaKnown RBP14.19□□□□□ -0.14
SGIP1-213ENST00000493564 SLC52A1Q9NWF4 448 aa14.19□□□□□ -0.14
SGIP1-213ENST00000493564 NOS1P29475 1434 aa14.18□□□□□ -0.14
SGIP1-213ENST00000493564 SYNMO15061 1565 aa14.17□□□□□ -0.14
SGIP1-213ENST00000493564 HFM1A2PYH4 1435 aa14.16□□□□□ -0.14
SGIP1-213ENST00000493564 FBXO41Q8TF61 875 aa14.16□□□□□ -0.14
SGIP1-213ENST00000493564 EID1Q9Y6B2 187 aa14.16□□□□□ -0.14
SGIP1-213ENST00000493564 TET3O43151 1660 aa14.16□□□□□ -0.14
SGIP1-213ENST00000493564 PIK3C2BO00750 1634 aa14.15□□□□□ -0.14
SGIP1-213ENST00000493564 UBR1Q8IWV7 1749 aa14.15□□□□□ -0.14
SGIP1-213ENST00000493564 NPHP4O75161 1426 aaPredicted RBP14.15□□□□□ -0.14
SGIP1-213ENST00000493564 RPRD2Q5VT52 1461 aaKnown RBP14.14□□□□□ -0.15
SGIP1-213ENST00000493564 IQGAP3Q86VI3 1631 aa14.14□□□□□ -0.15
SGIP1-213ENST00000493564 E9PCH4 1651 aa14.14□□□□□ -0.15
SGIP1-213ENST00000493564 NEURL4Q96JN8 1562 aa14.13□□□□□ -0.15
SGIP1-213ENST00000493564 TMEM2Q9UHN6 1383 aa14.13□□□□□ -0.15
SGIP1-213ENST00000493564 NUTM2DQ5VT03 806 aaPredicted RBP14.13□□□□□ -0.15
SGIP1-213ENST00000493564 BCANQ96GW7 911 aa14.13□□□□□ -0.15
SGIP1-213ENST00000493564 SLC4A1APQ9BWU0 796 aaKnown RBP14.13□□□□□ -0.15
SGIP1-213ENST00000493564 GCC2Q8IWJ2 1684 aa14.12□□□□□ -0.15
SGIP1-213ENST00000493564 FOXD1Q16676 465 aa14.12□□□□□ -0.15
SGIP1-213ENST00000493564 POLR1AO95602 1720 aaPredicted RBP14.11□□□□□ -0.15
SGIP1-213ENST00000493564 LTBP4Q8N2S1 1624 aa14.11□□□□□ -0.15
SGIP1-213ENST00000493564 SLC26A8Q96RN1 970 aa14.1□□□□□ -0.15
SGIP1-213ENST00000493564 MED14O60244 1454 aa14.1□□□□□ -0.15
SGIP1-213ENST00000493564 SCAF11Q99590 1463 aaKnown RBP14.1□□□□□ -0.15
SGIP1-213ENST00000493564 ARHGAP23Q9P227 1491 aa14.1□□□□□ -0.15
SGIP1-213ENST00000493564 SLIT1O75093 1534 aa14.09□□□□□ -0.15
SGIP1-213ENST00000493564 PPP1R15AO75807 674 aaPredicted RBP14.08□□□□□ -0.16
SGIP1-213ENST00000493564 ADGRB3O60242 1522 aa14.07□□□□□ -0.16
SGIP1-213ENST00000493564 HDGFP51858 240 aaKnown RBP14.07□□□□□ -0.16
SGIP1-213ENST00000493564 ZNF326Q5BKZ1 582 aaKnown RBP14.07□□□□□ -0.16
SGIP1-213ENST00000493564 MPHOSPH9Q99550 1183 aa14.07□□□□□ -0.16
SGIP1-213ENST00000493564 IQGAP1P46940 1657 aa14.07□□□□□ -0.16
SGIP1-213ENST00000493564 SETD5Q9C0A6 1442 aa14.07□□□□□ -0.16
Retrieved 100 of 20,778 RNA–protein pairs in 27.5 ms