RNA–Protein interactions for RNA: ENST00000493510.1

KPNA1-209, Transcript of karyopherin subunit alpha 1, humanhuman

TSL 4

Gene KPNA1, Length 596 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
KPNA1-209ENST00000493510 KLHL34Q8N239 644 aa11.93□□□□□ -0.5
KPNA1-209ENST00000493510 STAG3Q9UJ98 1225 aa11.93□□□□□ -0.5
KPNA1-209ENST00000493510 SSUH2Q9Y2M2 353 aa11.93□□□□□ -0.5
KPNA1-209ENST00000493510 ATAD2Q6PL18 1390 aa11.92□□□□□ -0.5
KPNA1-209ENST00000493510 CFAP74Q9C0B2 1584 aa11.92□□□□□ -0.5
KPNA1-209ENST00000493510 ARID3CA6NKF2 412 aa11.92□□□□□ -0.5
KPNA1-209ENST00000493510 JCADQ9P266 1359 aa11.92□□□□□ -0.5
KPNA1-209ENST00000493510 VWDEQ8N2E2 1590 aa11.91□□□□□ -0.5
KPNA1-209ENST00000493510 ATP10BO94823 1461 aa11.9□□□□□ -0.5
KPNA1-209ENST00000493510 FAM9AQ8IZU1 332 aaPredicted RBP11.9□□□□□ -0.5
KPNA1-209ENST00000493510 RAPGEF6Q8TEU7 1601 aa11.89□□□□□ -0.51
KPNA1-209ENST00000493510 CEP170BQ9Y4F5 1589 aaPredicted RBP11.89□□□□□ -0.51
KPNA1-209ENST00000493510 AGLP35573 1532 aa11.89□□□□□ -0.51
KPNA1-209ENST00000493510 CARMIL1Q5VZK9 1371 aa11.89□□□□□ -0.51
KPNA1-209ENST00000493510 ZNF142P52746 1687 aaPredicted RBP11.88□□□□□ -0.51
KPNA1-209ENST00000493510 CCDC125Q86Z20 511 aa11.88□□□□□ -0.51
KPNA1-209ENST00000493510 SPOCK2Q92563 424 aa11.88□□□□□ -0.51
KPNA1-209ENST00000493510 SCAPERQ9BY12 1400 aa11.87□□□□□ -0.51
KPNA1-209ENST00000493510 C1QTNF8P60827 252 aa11.87□□□□□ -0.51
KPNA1-209ENST00000493510 ZMYM3Q14202 1370 aa11.86□□□□□ -0.51
KPNA1-209ENST00000493510 RGS12O14924 1447 aa11.86□□□□□ -0.51
KPNA1-209ENST00000493510 SPATA31A6Q5VVP1 1343 aa11.86□□□□□ -0.51
KPNA1-209ENST00000493510 PLCB2Q00722 1185 aa11.85□□□□□ -0.51
KPNA1-209ENST00000493510 PLCD3Q8N3E9 789 aa11.85□□□□□ -0.51
KPNA1-209ENST00000493510 SUPT6HQ7KZ85 1726 aaKnown RBP11.85□□□□□ -0.51
KPNA1-209ENST00000493510 ANKLE2Q86XL3 938 aa11.84□□□□□ -0.51
KPNA1-209ENST00000493510 MYO3AQ8NEV4 1616 aa11.84□□□□□ -0.51
KPNA1-209ENST00000493510 CDK13Q14004 1512 aaKnown RBP11.84□□□□□ -0.51
KPNA1-209ENST00000493510 SYNMO15061 1565 aa11.84□□□□□ -0.51
KPNA1-209ENST00000493510 MYT1LQ9UL68 1186 aa11.83□□□□□ -0.52
KPNA1-209ENST00000493510 KIF27Q86VH2 1401 aa11.83□□□□□ -0.52
KPNA1-209ENST00000493510 RBM6P78332 1123 aaKnown RBP11.82□□□□□ -0.52
KPNA1-209ENST00000493510 MIER1Q8N108 512 aa11.82□□□□□ -0.52
KPNA1-209ENST00000493510 NEURL4Q96JN8 1562 aa11.82□□□□□ -0.52
KPNA1-209ENST00000493510 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP11.8□□□□□ -0.52
KPNA1-209ENST00000493510 LRP6O75581 1613 aa11.8□□□□□ -0.52
KPNA1-209ENST00000493510 GOLGA3Q08378 1498 aa11.8□□□□□ -0.52
KPNA1-209ENST00000493510 REREQ9P2R6 1566 aa11.79□□□□□ -0.52
KPNA1-209ENST00000493510 A2ML1A8K2U0 1454 aa11.79□□□□□ -0.52
KPNA1-209ENST00000493510 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP11.79□□□□□ -0.52
KPNA1-209ENST00000493510 NPHP4O75161 1426 aaPredicted RBP11.77□□□□□ -0.52
KPNA1-209ENST00000493510 ZNF784Q8NCA9 323 aaPredicted RBP11.77□□□□□ -0.53
KPNA1-209ENST00000493510 NHSL1Q5SYE7 1610 aa11.77□□□□□ -0.53
KPNA1-209ENST00000493510 POLR1AO95602 1720 aaPredicted RBP11.77□□□□□ -0.53
KPNA1-209ENST00000493510 MROH2AA6NES4 1674 aa11.76□□□□□ -0.53
KPNA1-209ENST00000493510 NGLY1Q96IV0 654 aa11.76□□□□□ -0.53
KPNA1-209ENST00000493510 ECM2O94769 699 aaPredicted RBP11.75□□□□□ -0.53
KPNA1-209ENST00000493510 HRCP23327 699 aa11.75□□□□□ -0.53
KPNA1-209ENST00000493510 AFF2P51816 1311 aa11.75□□□□□ -0.53
KPNA1-209ENST00000493510 QTRT2Q9H974 415 aaKnown RBP11.74□□□□□ -0.53
KPNA1-209ENST00000493510 FGD6Q6ZV73 1430 aa11.74□□□□□ -0.53
KPNA1-209ENST00000493510 MED14O60244 1454 aa11.74□□□□□ -0.53
KPNA1-209ENST00000493510 ZNF518AQ6AHZ1 1483 aa11.74□□□□□ -0.53
KPNA1-209ENST00000493510 DNMT1P26358 1616 aaKnown RBP11.74□□□□□ -0.53
KPNA1-209ENST00000493510 ROBO1Q9Y6N7 1651 aa11.73□□□□□ -0.53
KPNA1-209ENST00000493510 PLEKHD1A6NEE1 506 aa11.72□□□□□ -0.53
KPNA1-209ENST00000493510 DIP2CQ9Y2E4 1556 aa11.71□□□□□ -0.53
KPNA1-209ENST00000493510 HAP1P54257 671 aaPredicted RBP11.71□□□□□ -0.53
KPNA1-209ENST00000493510 LRRC9Q6ZRR7 1453 aa11.7□□□□□ -0.54
KPNA1-209ENST00000493510 THEMISQ8N1K5 641 aaPredicted RBP11.7□□□□□ -0.54
KPNA1-209ENST00000493510 AFAP1Q8N556 730 aa11.7□□□□□ -0.54
KPNA1-209ENST00000493510 PLEKHG5O94827 1062 aa11.69□□□□□ -0.54
KPNA1-209ENST00000493510 KDM5DQ9BY66 1539 aa11.69□□□□□ -0.54
KPNA1-209ENST00000493510 NWD1Q149M9 1564 aa11.68□□□□□ -0.54
KPNA1-209ENST00000493510 PSDA5PKW4 1024 aaPredicted RBP11.68□□□□□ -0.54
KPNA1-209ENST00000493510 STRCP1A6NGW2 1772 aa11.68□□□□□ -0.54
KPNA1-209ENST00000493510 PHLPP1O60346 1717 aa11.67□□□□□ -0.54
KPNA1-209ENST00000493510 EFCAB2Q5VUJ9 269 aa11.67□□□□□ -0.54
KPNA1-209ENST00000493510 CEP350Q5VT06 3117 aa11.66□□□□□ -0.54
KPNA1-209ENST00000493510 PLCH2O75038 1416 aa11.66□□□□□ -0.54
KPNA1-209ENST00000493510 KDM5CP41229 1560 aa11.66□□□□□ -0.54
KPNA1-209ENST00000493510 DEPDC5O75140 1603 aa11.65□□□□□ -0.54
KPNA1-209ENST00000493510 ZBTB47Q9UFB7 747 aaPredicted RBP11.65□□□□□ -0.54
KPNA1-209ENST00000493510 BLMP54132 1417 aaPredicted RBP11.64□□□□□ -0.55
KPNA1-209ENST00000493510 ABCC1P33527 1531 aa11.64□□□□□ -0.55
KPNA1-209ENST00000493510 MLH3Q9UHC1 1453 aa11.63□□□□□ -0.55
KPNA1-209ENST00000493510 IQGAP1P46940 1657 aa11.63□□□□□ -0.55
KPNA1-209ENST00000493510 SF3B2Q13435 895 aaKnown RBP11.63□□□□□ -0.55
KPNA1-209ENST00000493510 DEFB132Q7Z7B7 95 aa11.62□□□□□ -0.55
KPNA1-209ENST00000493510 BBXQ8WY36 941 aaPredicted RBP11.62□□□□□ -0.55
KPNA1-209ENST00000493510 SLAIN2Q9P270 581 aa11.62□□□□□ -0.55
KPNA1-209ENST00000493510 CIZ1Q9ULV3 898 aaPredicted RBP11.62□□□□□ -0.55
KPNA1-209ENST00000493510 ABCA6Q8N139 1617 aa11.61□□□□□ -0.55
KPNA1-209ENST00000493510 RGL2O15211 777 aa11.61□□□□□ -0.55
KPNA1-209ENST00000493510 ZBTB4Q9P1Z0 1013 aaPredicted RBP11.61□□□□□ -0.55
KPNA1-209ENST00000493510 BCL9LQ86UU0 1499 aa11.61□□□□□ -0.55
KPNA1-209ENST00000493510 COL16A1Q07092 1604 aaPredicted RBP11.6□□□□□ -0.55
KPNA1-209ENST00000493510 TMEM94Q12767 1356 aa11.6□□□□□ -0.55
KPNA1-209ENST00000493510 EP400Q96L91 3159 aa11.6□□□□□ -0.55
KPNA1-209ENST00000493510 FAM135AQ9P2D6 1515 aa11.6□□□□□ -0.55
KPNA1-209ENST00000493510 C8orf37Q96NL8 207 aa11.59□□□□□ -0.55
KPNA1-209ENST00000493510 TNRQ92752 1358 aa11.58□□□□□ -0.56
KPNA1-209ENST00000493510 PRELPP51888 382 aa11.58□□□□□ -0.56
KPNA1-209ENST00000493510 GIGYF1O75420 1035 aaPredicted RBP11.57□□□□□ -0.56
KPNA1-209ENST00000493510 CLTCQ00610 1675 aaKnown RBP11.55□□□□□ -0.56
KPNA1-209ENST00000493510 SHPRHQ149N8 1683 aa11.55□□□□□ -0.56
KPNA1-209ENST00000493510 XIRP1Q702N8 1843 aaKnown RBP11.54□□□□□ -0.56
KPNA1-209ENST00000493510 UGGT1Q9NYU2 1555 aa11.54□□□□□ -0.56
KPNA1-209ENST00000493510 PAXIP1Q6ZW49 1069 aaPredicted RBP11.53□□□□□ -0.56
KPNA1-209ENST00000493510 P3H3Q8IVL6 736 aa11.53□□□□□ -0.56
Retrieved 100 of 20,778 RNA–protein pairs in 23 ms