RNA–Protein interactions for RNA: ENST00000493232.5

BRAT1-206, Transcript of BRCA1 associated ATM activator 1, humanhuman

TSL 2

Gene BRAT1, Length 5,360 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRAT1-206ENST00000493232 SLC4A10Q6U841 1118 aa20.35■□□□□ 0.85
BRAT1-206ENST00000493232 CCDC144AA2RUR9 1427 aa20.34■□□□□ 0.85
BRAT1-206ENST00000493232 HSP90B1P14625 803 aaKnown RBP20.34■□□□□ 0.85
BRAT1-206ENST00000493232 SLKQ9H2G2 1235 aaPredicted RBP20.33■□□□□ 0.84
BRAT1-206ENST00000493232 CCDC146Q8IYE0 955 aa20.32■□□□□ 0.84
BRAT1-206ENST00000493232 ATAD2BQ9ULI0 1458 aa20.32■□□□□ 0.84
BRAT1-206ENST00000493232 DEKP35659 375 aaKnown RBP20.32■□□□□ 0.84
BRAT1-206ENST00000493232 MYBBP1AQ9BQG0 1328 aaKnown RBP20.31■□□□□ 0.84
BRAT1-206ENST00000493232 KIF3AQ9Y496 699 aa20.31■□□□□ 0.84
BRAT1-206ENST00000493232 NUTM2DQ5VT03 806 aaPredicted RBP20.3■□□□□ 0.84
BRAT1-206ENST00000493232 SUGP2Q8IX01 1082 aaKnown RBP eCLIP20.3■□□□□ 0.84
BRAT1-206ENST00000493232 TRAK1Q9UPV9 953 aa20.3■□□□□ 0.84
BRAT1-206ENST00000493232 CLUAP1Q96AJ1 413 aa20.3■□□□□ 0.84
BRAT1-206ENST00000493232 VGFO15240 615 aaPredicted RBP20.29■□□□□ 0.84
BRAT1-206ENST00000493232 G3V3G9 751 aa20.28■□□□□ 0.84
BRAT1-206ENST00000493232 DCAF8Q5TAQ9 597 aa20.28■□□□□ 0.84
BRAT1-206ENST00000493232 LTV1Q96GA3 475 aaPredicted RBP20.27■□□□□ 0.84
BRAT1-206ENST00000493232 ST18O60284 1047 aa20.27■□□□□ 0.83
BRAT1-206ENST00000493232 CGNL1Q0VF96 1302 aa20.26■□□□□ 0.83
BRAT1-206ENST00000493232 EVC2Q86UK5 1308 aa20.25■□□□□ 0.83
BRAT1-206ENST00000493232 GTF2E1P29083 439 aaPredicted RBP20.25■□□□□ 0.83
BRAT1-206ENST00000493232 CHMP4CQ96CF2 233 aa20.25■□□□□ 0.83
BRAT1-206ENST00000493232 COG3Q96JB2 828 aa20.25■□□□□ 0.83
BRAT1-206ENST00000493232 WIZO95785 1651 aa20.25■□□□□ 0.83
BRAT1-206ENST00000493232 GZF1Q9H116 711 aaPredicted RBP20.25■□□□□ 0.83
BRAT1-206ENST00000493232 KIF16BQ96L93 1317 aa20.24■□□□□ 0.83
BRAT1-206ENST00000493232 RASSF8Q8NHQ8 419 aa20.24■□□□□ 0.83
BRAT1-206ENST00000493232 ST20-MTHFSA0A0A6YYL1 179 aa20.22■□□□□ 0.83
BRAT1-206ENST00000493232 GOLGA6L3A6NEY3 463 aa20.22■□□□□ 0.83
BRAT1-206ENST00000493232 PANK3Q9H999 370 aa20.22■□□□□ 0.83
BRAT1-206ENST00000493232 FRAT2O75474 233 aaPredicted RBP20.22■□□□□ 0.83
BRAT1-206ENST00000493232 PHF14O94880 888 aa20.22■□□□□ 0.83
BRAT1-206ENST00000493232 C1orf141Q5JVX7 400 aa20.22■□□□□ 0.83
BRAT1-206ENST00000493232 IPO9Q96P70 1041 aaKnown RBP20.22■□□□□ 0.83
BRAT1-206ENST00000493232 PTPRGP23470 1445 aa20.21■□□□□ 0.83
BRAT1-206ENST00000493232 NOC3LQ8WTT2 800 aaKnown RBP20.21■□□□□ 0.83
BRAT1-206ENST00000493232 SMARCA4P51532 1647 aa20.21■□□□□ 0.83
BRAT1-206ENST00000493232 NCBP3Q53F19 620 aaKnown RBP20.2■□□□□ 0.82
BRAT1-206ENST00000493232 TOMM22Q9NS69 142 aa20.2■□□□□ 0.82
BRAT1-206ENST00000493232 E9PSI1 815 aa20.2■□□□□ 0.82
BRAT1-206ENST00000493232 NUTM2FA1L443 756 aa20.2■□□□□ 0.82
BRAT1-206ENST00000493232 CENPQQ7L2Z9 268 aaPredicted RBP20.18■□□□□ 0.82
BRAT1-206ENST00000493232 ZKSCAN2Q63HK3 967 aa20.17■□□□□ 0.82
BRAT1-206ENST00000493232 RRP7AQ9Y3A4 280 aaKnown RBP20.16■□□□□ 0.82
BRAT1-206ENST00000493232 TEFQ10587 303 aa20.16■□□□□ 0.82
BRAT1-206ENST00000493232 LRRFIP1Q32MZ4 808 aaKnown RBP20.16■□□□□ 0.82
BRAT1-206ENST00000493232 NGEFQ8N5V2 710 aa20.16■□□□□ 0.82
BRAT1-206ENST00000493232 SF3A1Q15459 793 aaKnown RBP20.15■□□□□ 0.82
BRAT1-206ENST00000493232 NOL8Q76FK4 1167 aaKnown RBP20.15■□□□□ 0.82
BRAT1-206ENST00000493232 MARCH6O60337 910 aa20.13■□□□□ 0.81
BRAT1-206ENST00000493232 NEXNQ0ZGT2 675 aa20.13■□□□□ 0.81
BRAT1-206ENST00000493232 DDX11L8A8MPP1 907 aa20.13■□□□□ 0.81
BRAT1-206ENST00000493232 USP47Q96K76 1375 aa20.12■□□□□ 0.81
BRAT1-206ENST00000493232 FANCD2Q9BXW9 1451 aa20.12■□□□□ 0.81
BRAT1-206ENST00000493232 ATP6V1DQ9Y5K8 247 aa20.12■□□□□ 0.81
BRAT1-206ENST00000493232 DHX57Q6P158 1386 aaKnown RBP20.12■□□□□ 0.81
BRAT1-206ENST00000493232 TTC5Q8N0Z6 440 aa20.11■□□□□ 0.81
BRAT1-206ENST00000493232 EVA1CP58658 441 aa20.1■□□□□ 0.81
BRAT1-206ENST00000493232 TPM3P06753 285 aa20.1■□□□□ 0.81
BRAT1-206ENST00000493232 H3BQV1 296 aa20.1■□□□□ 0.81
BRAT1-206ENST00000493232 IFFO2Q5TF58 517 aa20.1■□□□□ 0.81
BRAT1-206ENST00000493232 USP35Q9P2H5 1018 aa20.1■□□□□ 0.81
BRAT1-206ENST00000493232 ANKRD45Q5TZF3 282 aa20.09■□□□□ 0.81
BRAT1-206ENST00000493232 RILPL2Q969X0 211 aa20.09■□□□□ 0.81
BRAT1-206ENST00000493232 FOXD4L1Q9NU39 408 aa20.09■□□□□ 0.81
BRAT1-206ENST00000493232 PRKRIP1Q9H875 184 aaPredicted RBP20.09■□□□□ 0.81
BRAT1-206ENST00000493232 FAM161AQ3B820 660 aa20.08■□□□□ 0.81
BRAT1-206ENST00000493232 ELL2O00472 640 aaPredicted RBP20.08■□□□□ 0.81
BRAT1-206ENST00000493232 MINK1Q8N4C8 1332 aaPredicted RBP20.08■□□□□ 0.81
BRAT1-206ENST00000493232 STAC3Q96MF2 364 aa20.08■□□□□ 0.81
BRAT1-206ENST00000493232 AKAP17AQ02040 695 aaKnown RBP20.08■□□□□ 0.8
BRAT1-206ENST00000493232 FAM184AQ8NB25 1140 aa20.08■□□□□ 0.8
BRAT1-206ENST00000493232 RUFY2Q8WXA3 655 aa20.08■□□□□ 0.8
BRAT1-206ENST00000493232 CEP89Q96ST8 783 aa20.08■□□□□ 0.8
BRAT1-206ENST00000493232 DIAPH1O60610 1272 aaKnown RBP20.07■□□□□ 0.8
BRAT1-206ENST00000493232 ABCF1Q8NE71 845 aaKnown RBP eCLIP20.07■□□□□ 0.8
BRAT1-206ENST00000493232 ZBED9Q6R2W3 1325 aa20.07■□□□□ 0.8
BRAT1-206ENST00000493232 GOLGA6L1Q8N7Z2 621 aa20.07■□□□□ 0.8
BRAT1-206ENST00000493232 DIAPH3Q9NSV4 1193 aa20.07■□□□□ 0.8
BRAT1-206ENST00000493232 SYNE3Q6ZMZ3 975 aa20.06■□□□□ 0.8
BRAT1-206ENST00000493232 API5Q9BZZ5 524 aaKnown RBP20.06■□□□□ 0.8
BRAT1-206ENST00000493232 CPLX2Q6PUV4 134 aaKnown RBP20.06■□□□□ 0.8
BRAT1-206ENST00000493232 RRP1P56182 461 aaKnown RBP20.06■□□□□ 0.8
BRAT1-206ENST00000493232 VPS53Q5VIR6 699 aa20.06■□□□□ 0.8
BRAT1-206ENST00000493232 MYOM3Q5VTT5 1437 aa20.05■□□□□ 0.8
BRAT1-206ENST00000493232 DDX19BQ9UMR2 479 aa20.05■□□□□ 0.8
BRAT1-206ENST00000493232 ROCK1Q13464 1354 aa20.05■□□□□ 0.8
BRAT1-206ENST00000493232 CREBRFQ8IUR6 639 aa20.05■□□□□ 0.8
BRAT1-206ENST00000493232 AMOTL1Q8IY63 956 aa20.04■□□□□ 0.8
BRAT1-206ENST00000493232 BCL2L13Q9BXK5 485 aa20.04■□□□□ 0.8
BRAT1-206ENST00000493232 C9orf78Q9NZ63 289 aaPredicted RBP20.04■□□□□ 0.8
BRAT1-206ENST00000493232 DDX58O95786 925 aaKnown RBP20.04■□□□□ 0.8
BRAT1-206ENST00000493232 NOL10Q9BSC4 688 aaKnown RBP20.04■□□□□ 0.8
BRAT1-206ENST00000493232 TSHZ2Q9NRE2 1034 aa20.04■□□□□ 0.8
BRAT1-206ENST00000493232 REC8O95072 547 aa20.03■□□□□ 0.8
BRAT1-206ENST00000493232 SKOR2Q2VWA4 1001 aaPredicted RBP20.03■□□□□ 0.8
BRAT1-206ENST00000493232 A0A0U1RQG5 324 aaPredicted RBP20.02■□□□□ 0.8
BRAT1-206ENST00000493232 OSCARQ8IYS5 282 aa20.02■□□□□ 0.8
BRAT1-206ENST00000493232 TPD52L1Q16890 204 aaPredicted RBP20.01■□□□□ 0.79
BRAT1-206ENST00000493232 ZKSCAN1P17029 563 aaPredicted RBP20.01■□□□□ 0.79
Retrieved 100 of 20,778 RNA–protein pairs in 7.5 ms