RNA–Protein interactions for RNA: ENST00000493191.1

HMG20B-214, Transcript of high mobility group 20B, humanhuman

TSL 3

Gene HMG20B, Length 852 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMG20B-214ENST00000493191 DISP3Q9P2K9 1392 aa35.84■■■■□ 3.33
HMG20B-214ENST00000493191 WASHC2CQ9Y4E1 1318 aa35.82■■■■□ 3.32
HMG20B-214ENST00000493191 TSPY4P0CV99 314 aa35.81■■■■□ 3.32
HMG20B-214ENST00000493191 TSPY10P0CW01 314 aa35.81■■■■□ 3.32
HMG20B-214ENST00000493191 DNMT1P26358 1616 aaKnown RBP35.81■■■■□ 3.32
HMG20B-214ENST00000493191 TNRQ92752 1358 aa35.79■■■■□ 3.32
HMG20B-214ENST00000493191 KDM5DQ9BY66 1539 aa35.79■■■■□ 3.32
HMG20B-214ENST00000493191 VPS8Q8N3P4 1428 aa35.79■■■■□ 3.32
HMG20B-214ENST00000493191 ARHGEF5Q12774 1597 aa35.79■■■■□ 3.32
HMG20B-214ENST00000493191 LRRC9Q6ZRR7 1453 aa35.79■■■■□ 3.32
HMG20B-214ENST00000493191 PZPP20742 1482 aa35.76■■■■□ 3.32
HMG20B-214ENST00000493191 FAM135AQ9P2D6 1515 aa35.73■■■■□ 3.31
HMG20B-214ENST00000493191 UBAP1LF5GYI3 381 aa35.72■■■■□ 3.31
HMG20B-214ENST00000493191 KANK4Q5T7N3 995 aaPredicted RBP35.72■■■■□ 3.31
HMG20B-214ENST00000493191 ILDR2Q71H61 639 aa35.71■■■■□ 3.31
HMG20B-214ENST00000493191 MIA2Q96PC5 1412 aa35.66■■■■□ 3.3
HMG20B-214ENST00000493191 POLR1AO95602 1720 aaPredicted RBP35.64■■■■□ 3.3
HMG20B-214ENST00000493191 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP35.63■■■■□ 3.293e-7■■■□□ 14.6
HMG20B-214ENST00000493191 NEURL4Q96JN8 1562 aa35.62■■■■□ 3.29
HMG20B-214ENST00000493191 SPATA31D1Q6ZQQ2 1576 aa35.61■■■■□ 3.29
HMG20B-214ENST00000493191 MAST1Q9Y2H9 1570 aa35.61■■■■□ 3.29
HMG20B-214ENST00000493191 THEMISQ8N1K5 641 aaPredicted RBP35.61■■■■□ 3.29
HMG20B-214ENST00000493191 ANKLE2Q86XL3 938 aa35.6■■■■□ 3.29
HMG20B-214ENST00000493191 MAP3K1Q13233 1512 aa35.6■■■■□ 3.29
HMG20B-214ENST00000493191 NLRP1Q9C000 1473 aa35.59■■■■□ 3.29
HMG20B-214ENST00000493191 MYOM3Q5VTT5 1437 aa35.58■■■■□ 3.29
HMG20B-214ENST00000493191 RNF17Q9BXT8 1623 aaKnown RBP35.58■■■■□ 3.29
HMG20B-214ENST00000493191 UGGT1Q9NYU2 1555 aa35.56■■■■□ 3.28
HMG20B-214ENST00000493191 ABCC3O15438 1527 aa35.56■■■■□ 3.28
HMG20B-214ENST00000493191 SHANK2Q9UPX8 1470 aa35.52■■■■□ 3.28
HMG20B-214ENST00000493191 EIF2AK4Q9P2K8 1649 aaKnown RBP35.5■■■■□ 3.27
HMG20B-214ENST00000493191 ZC3H13Q5T200 1668 aaKnown RBP35.49■■■■□ 3.27
HMG20B-214ENST00000493191 CPS1P31327 1500 aa35.48■■■■□ 3.27
HMG20B-214ENST00000493191 NPHP4O75161 1426 aaPredicted RBP35.48■■■■□ 3.27
HMG20B-214ENST00000493191 CFAP65Q6ZU64 1925 aaKnown RBP35.47■■■■□ 3.27
HMG20B-214ENST00000493191 MROH1Q8NDA8 1641 aa35.46■■■■□ 3.27
HMG20B-214ENST00000493191 SOCS7O14512 581 aa35.46■■■■□ 3.27
HMG20B-214ENST00000493191 SCAF1Q9H7N4 1312 aaKnown RBP35.46■■■■□ 3.27
HMG20B-214ENST00000493191 DEPDC5O75140 1603 aa35.44■■■■□ 3.26
HMG20B-214ENST00000493191 MED14O60244 1454 aa35.44■■■■□ 3.26
HMG20B-214ENST00000493191 ERVK-7P63135 1459 aa35.44■■■■□ 3.26
HMG20B-214ENST00000493191 PIP4K2BP78356 416 aa35.44■■■■□ 3.26
HMG20B-214ENST00000493191 CEP152O94986 1710 aa35.43■■■■□ 3.26
HMG20B-214ENST00000493191 VWDEQ8N2E2 1590 aa35.43■■■■□ 3.26
HMG20B-214ENST00000493191 DUOX2Q9NRD8 1548 aa35.43■■■■□ 3.26
HMG20B-214ENST00000493191 TOM1O60784 492 aa35.41■■■■□ 3.26
HMG20B-214ENST00000493191 APLP2Q06481 763 aa35.4■■■■□ 3.26
HMG20B-214ENST00000493191 RRP7BPQ9NSQ0 103 aa35.39■■■■□ 3.26
HMG20B-214ENST00000493191 KIF15Q9NS87 1388 aa35.38■■■■□ 3.26
HMG20B-214ENST00000493191 IQGAP1P46940 1657 aa35.38■■■■□ 3.25
HMG20B-214ENST00000493191 ABCC5O15440 1437 aa35.38■■■■□ 3.25
HMG20B-214ENST00000493191 HSPA1LP34931 641 aa35.36■■■■□ 3.25
HMG20B-214ENST00000493191 PTPN23Q9H3S7 1636 aa35.35■■■■□ 3.25
HMG20B-214ENST00000493191 CROCC2H7BZ55 1655 aa35.33■■■■□ 3.25
HMG20B-214ENST00000493191 GRWD1Q9BQ67 446 aaKnown RBP eCLIP35.31■■■■□ 3.242e-7■□□□□ 9.7
HMG20B-214ENST00000493191 UBR1Q8IWV7 1749 aa35.3■■■■□ 3.24
HMG20B-214ENST00000493191 ERBINQ96RT1 1412 aa35.3■■■■□ 3.24
HMG20B-214ENST00000493191 PRDM15P57071 1507 aaPredicted RBP35.28■■■■□ 3.24
HMG20B-214ENST00000493191 DAPK1P53355 1430 aa35.28■■■■□ 3.24
HMG20B-214ENST00000493191 STRCP1A6NGW2 1772 aa35.27■■■■□ 3.24
HMG20B-214ENST00000493191 ARHGAP31Q2M1Z3 1444 aa35.25■■■■□ 3.23
HMG20B-214ENST00000493191 FGD6Q6ZV73 1430 aa35.24■■■■□ 3.23
HMG20B-214ENST00000493191 CHIC2Q9UKJ5 165 aa35.24■■■■□ 3.23
HMG20B-214ENST00000493191 LTKP29376 864 aa35.23■■■■□ 3.23
HMG20B-214ENST00000493191 SCAF11Q99590 1463 aaKnown RBP35.22■■■■□ 3.23
HMG20B-214ENST00000493191 TXNDC2Q86VQ3 553 aa35.21■■■■□ 3.23
HMG20B-214ENST00000493191 LRRC7Q96NW7 1537 aa35.21■■■■□ 3.23
HMG20B-214ENST00000493191 ALKQ9UM73 1620 aa35.21■■■■□ 3.23
HMG20B-214ENST00000493191 KANK1Q14678 1352 aa35.18■■■■□ 3.22
HMG20B-214ENST00000493191 ARHGAP23Q9P227 1491 aa35.17■■■■□ 3.22
HMG20B-214ENST00000493191 ANKRD30AQ9BXX3 1397 aa35.16■■■■□ 3.22
HMG20B-214ENST00000493191 SLIT1O75093 1534 aa35.16■■■■□ 3.22
HMG20B-214ENST00000493191 STAG3Q9UJ98 1225 aa35.13■■■■□ 3.21
HMG20B-214ENST00000493191 EID1Q9Y6B2 187 aa35.13■■■■□ 3.21
HMG20B-214ENST00000493191 PIK3C2BO00750 1634 aa35.13■■■■□ 3.21
HMG20B-214ENST00000493191 SYNMO15061 1565 aa35.12■■■■□ 3.21
HMG20B-214ENST00000493191 MED1Q15648 1581 aaPredicted RBP35.12■■■■□ 3.21
HMG20B-214ENST00000493191 SENP3Q9H4L4 574 aaPredicted RBP35.11■■■■□ 3.21
HMG20B-214ENST00000493191 TMEM2Q9UHN6 1383 aa35.08■■■■□ 3.21
HMG20B-214ENST00000493191 IDI1Q13907 227 aa35.07■■■■□ 3.2
HMG20B-214ENST00000493191 LMTK2Q8IWU2 1503 aa35.06■■■■□ 3.2
HMG20B-214ENST00000493191 FAM50AQ14320 339 aaKnown RBP35.03■■■■□ 3.2
HMG20B-214ENST00000493191 EFCAB6Q5THR3 1501 aa35.01■■■■□ 3.19
HMG20B-214ENST00000493191 ADGRL2O95490 1459 aa34.97■■■■□ 3.19
HMG20B-214ENST00000493191 KDM5AP29375 1690 aaKnown RBP34.97■■■■□ 3.19
HMG20B-214ENST00000493191 XIRP1Q702N8 1843 aaKnown RBP34.97■■■■□ 3.19
HMG20B-214ENST00000493191 NOS1P29475 1434 aa34.96■■■■□ 3.19
HMG20B-214ENST00000493191 PHF23Q9BUL5 403 aaPredicted RBP34.94■■■■□ 3.18
HMG20B-214ENST00000493191 SLC26A8Q96RN1 970 aa34.92■■■■□ 3.18
HMG20B-214ENST00000493191 ANKRD50Q9ULJ7 1429 aa34.9■■■■□ 3.18
HMG20B-214ENST00000493191 SLC52A1Q9NWF4 448 aa34.89■■■■□ 3.18
HMG20B-214ENST00000493191 KCNA6P17658 529 aa34.88■■■■□ 3.17
HMG20B-214ENST00000493191 ADGRB3O60242 1522 aa34.87■■■■□ 3.17
HMG20B-214ENST00000493191 TET3O43151 1660 aa34.86■■■■□ 3.17
HMG20B-214ENST00000493191 TMEM94Q12767 1356 aa34.86■■■■□ 3.17
HMG20B-214ENST00000493191 BCANQ96GW7 911 aa34.84■■■■□ 3.17
HMG20B-214ENST00000493191 RBM33Q96EV2 1170 aaKnown RBP34.83■■■■□ 3.17
HMG20B-214ENST00000493191 PROSER2Q86WR7 435 aaPredicted RBP34.82■■■■□ 3.16
HMG20B-214ENST00000493191 RPRD2Q5VT52 1461 aaKnown RBP34.82■■■■□ 3.16
HMG20B-214ENST00000493191 MYO5BQ9ULV0 1848 aa34.76■■■■□ 3.16
Retrieved 100 of 20,778 RNA–protein pairs in 11.5 ms