RNA–Protein interactions for RNA: ENST00000493116.5

SOX2-OT-214, SOX2 overlapping transcript, humanhuman

TSL 4

Gene SOX2-OT, Length 560 nt, Biotype sense overlapping.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SOX2-OT-214ENST00000493116 OXER1Q8TDS5 423 aa9.39□□□□□ -0.91
SOX2-OT-214ENST00000493116 PCMTD1Q96MG8 357 aaPredicted RBP9.39□□□□□ -0.91
SOX2-OT-214ENST00000493116 MYO15BQ96JP2 1530 aa9.38□□□□□ -0.91
SOX2-OT-214ENST00000493116 ONECUT3O60422 494 aaPredicted RBP9.37□□□□□ -0.91
SOX2-OT-214ENST00000493116 TTLL12Q14166 644 aaPredicted RBP9.36□□□□□ -0.91
SOX2-OT-214ENST00000493116 APBB1O00213 710 aa9.35□□□□□ -0.91
SOX2-OT-214ENST00000493116 ST18O60284 1047 aa9.35□□□□□ -0.91
SOX2-OT-214ENST00000493116 PTGDRQ13258 359 aa9.35□□□□□ -0.91
SOX2-OT-214ENST00000493116 HOXB3P14651 431 aaPredicted RBP9.34□□□□□ -0.91
SOX2-OT-214ENST00000493116 C1orf115Q9H7X2 142 aa9.34□□□□□ -0.91
SOX2-OT-214ENST00000493116 SH3D19Q5HYK7 790 aa9.33□□□□□ -0.92
SOX2-OT-214ENST00000493116 ABCC9O60706 1549 aa9.32□□□□□ -0.92
SOX2-OT-214ENST00000493116 TRAK2O60296 914 aa9.32□□□□□ -0.92
SOX2-OT-214ENST00000493116 CLCN1P35523 988 aa9.32□□□□□ -0.92
SOX2-OT-214ENST00000493116 RANGAP1P46060 587 aaPredicted RBP9.32□□□□□ -0.92
SOX2-OT-214ENST00000493116 TRIM26Q12899 539 aaPredicted RBP9.32□□□□□ -0.92
SOX2-OT-214ENST00000493116 GIGYF2Q6Y7W6 1299 aaKnown RBP9.32□□□□□ -0.92
SOX2-OT-214ENST00000493116 FECHP22830 423 aa9.31□□□□□ -0.92
SOX2-OT-214ENST00000493116 DOK7Q18PE1 504 aa9.31□□□□□ -0.92
SOX2-OT-214ENST00000493116 TMUB1Q9BVT8 246 aa9.31□□□□□ -0.92
SOX2-OT-214ENST00000493116 ANO8Q9HCE9 1232 aaPredicted RBP9.31□□□□□ -0.92
SOX2-OT-214ENST00000493116 POTEMA6NI47 508 aa9.3□□□□□ -0.92
SOX2-OT-214ENST00000493116 EVI5O60447 810 aa9.3□□□□□ -0.92
SOX2-OT-214ENST00000493116 DDX12PQ92771 950 aa9.3□□□□□ -0.92
SOX2-OT-214ENST00000493116 EPAS1Q99814 870 aa9.3□□□□□ -0.92
SOX2-OT-214ENST00000493116 ARID3AQ99856 593 aa9.3□□□□□ -0.92
SOX2-OT-214ENST00000493116 SKIV2LQ15477 1246 aaKnown RBP9.29□□□□□ -0.92
SOX2-OT-214ENST00000493116 POTEGQ6S5H5 508 aa9.29□□□□□ -0.92
SOX2-OT-214ENST00000493116 NACADO15069 1562 aa9.29□□□□□ -0.92
SOX2-OT-214ENST00000493116 MS4A1P11836 297 aa9.28□□□□□ -0.92
SOX2-OT-214ENST00000493116 PTCD2Q8WV60 388 aaKnown RBP9.28□□□□□ -0.92
SOX2-OT-214ENST00000493116 UPF1Q92900 1129 aaKnown RBP eCLIP9.28□□□□□ -0.92
SOX2-OT-214ENST00000493116 PDIA4P13667 645 aaKnown RBP9.27□□□□□ -0.93
SOX2-OT-214ENST00000493116 GPCPD1Q9NPB8 672 aa9.27□□□□□ -0.93
SOX2-OT-214ENST00000493116 SLC34A2O95436 690 aa9.26□□□□□ -0.93
SOX2-OT-214ENST00000493116 HRCP23327 699 aa9.26□□□□□ -0.93
SOX2-OT-214ENST00000493116 ZNF710Q8N1W2 664 aa9.26□□□□□ -0.93
SOX2-OT-214ENST00000493116 ARID3CA6NKF2 412 aa9.25□□□□□ -0.93
SOX2-OT-214ENST00000493116 PHF14O94880 888 aa9.25□□□□□ -0.93
SOX2-OT-214ENST00000493116 RIMBP2O15034 1052 aa9.24□□□□□ -0.93
SOX2-OT-214ENST00000493116 MCM6Q14566 821 aa9.24□□□□□ -0.93
SOX2-OT-214ENST00000493116 ZBTB7CA1YPR0 619 aa9.23□□□□□ -0.93
SOX2-OT-214ENST00000493116 HOXB1P14653 301 aaPredicted RBP9.23□□□□□ -0.93
SOX2-OT-214ENST00000493116 PRIM1P49642 420 aaKnown RBP9.23□□□□□ -0.93
SOX2-OT-214ENST00000493116 EN1Q05925 392 aaPredicted RBP9.23□□□□□ -0.93
SOX2-OT-214ENST00000493116 MARVELD3Q96A59 401 aa9.23□□□□□ -0.93
SOX2-OT-214ENST00000493116 ZSWIM6Q9HCJ5 1215 aa9.23□□□□□ -0.93
SOX2-OT-214ENST00000493116 NPDC1Q9NQX5 325 aaPredicted RBP9.23□□□□□ -0.93
SOX2-OT-214ENST00000493116 SSTR3P32745 418 aaPredicted RBP9.22□□□□□ -0.93
SOX2-OT-214ENST00000493116 REPIN1Q9BWE0 567 aaKnown RBP9.22□□□□□ -0.93
SOX2-OT-214ENST00000493116 SHROOM4Q9ULL8 1493 aa9.21□□□□□ -0.93
SOX2-OT-214ENST00000493116 RAD21O60216 631 aa9.21□□□□□ -0.94
SOX2-OT-214ENST00000493116 OATP04181 439 aa9.21□□□□□ -0.94
SOX2-OT-214ENST00000493116 GPR153Q6NV75 609 aa9.21□□□□□ -0.94
SOX2-OT-214ENST00000493116 CLUAP1Q96AJ1 413 aa9.21□□□□□ -0.94
SOX2-OT-214ENST00000493116 SERPINA10Q9UK55 444 aa9.21□□□□□ -0.94
SOX2-OT-214ENST00000493116 DIXDC1Q155Q3 683 aa9.2□□□□□ -0.94
SOX2-OT-214ENST00000493116 BANK1Q8NDB2 785 aa9.2□□□□□ -0.94
SOX2-OT-214ENST00000493116 CERKQ8TCT0 537 aa9.2□□□□□ -0.94
SOX2-OT-214ENST00000493116 EMP3P54852 163 aa9.19□□□□□ -0.94
SOX2-OT-214ENST00000493116 PROSER2Q86WR7 435 aaPredicted RBP9.19□□□□□ -0.94
SOX2-OT-214ENST00000493116 CCDC82Q8N4S0 544 aa9.19□□□□□ -0.94
SOX2-OT-214ENST00000493116 RB1CC1Q8TDY2 1594 aa9.19□□□□□ -0.94
SOX2-OT-214ENST00000493116 MDM2Q00987 491 aaPredicted RBP9.18□□□□□ -0.94
SOX2-OT-214ENST00000493116 ARSIQ5FYB1 569 aa9.18□□□□□ -0.94
SOX2-OT-214ENST00000493116 FNBP4Q8N3X1 1017 aaPredicted RBP9.18□□□□□ -0.94
SOX2-OT-214ENST00000493116 FBXW7Q969H0 707 aa9.18□□□□□ -0.94
SOX2-OT-214ENST00000493116 SPDYE5A6NIY4 337 aa9.17□□□□□ -0.94
SOX2-OT-214ENST00000493116 BEGAINQ9BUH8 593 aa9.17□□□□□ -0.94
SOX2-OT-214ENST00000493116 MAP3K7O43318 606 aa9.16□□□□□ -0.94
SOX2-OT-214ENST00000493116 TYW1BQ6NUM6 668 aa9.16□□□□□ -0.94
SOX2-OT-214ENST00000493116 FAM217BQ9NTX9 383 aaPredicted RBP9.16□□□□□ -0.94
SOX2-OT-214ENST00000493116 KHSRPQ92945 711 aaKnown RBP eCLIP9.15□□□□□ -0.94
SOX2-OT-214ENST00000493116 GNL3Q9BVP2 549 aaKnown RBP eCLIP9.15□□□□□ -0.94
SOX2-OT-214ENST00000493116 TRAIPQ9BWF2 469 aa9.15□□□□□ -0.94
SOX2-OT-214ENST00000493116 CCDC9Q9Y3X0 531 aaKnown RBP9.15□□□□□ -0.94
SOX2-OT-214ENST00000493116 PCDHGA4Q9Y5G9 962 aa9.15□□□□□ -0.94
SOX2-OT-214ENST00000493116 TMEM259Q4ZIN3 620 aa9.14□□□□□ -0.95
SOX2-OT-214ENST00000493116 NPM2Q86SE8 214 aaKnown RBP9.14□□□□□ -0.95
SOX2-OT-214ENST00000493116 PCDH10Q9P2E7 1040 aa9.14□□□□□ -0.95
SOX2-OT-214ENST00000493116 RBM27Q9P2N5 1060 aaKnown RBP9.14□□□□□ -0.95
SOX2-OT-214ENST00000493116 POTEB3A0JP26 581 aa9.13□□□□□ -0.95
SOX2-OT-214ENST00000493116 FAM205CA6NFA0 338 aa9.13□□□□□ -0.95
SOX2-OT-214ENST00000493116 POTEBQ6S5H4 581 aa9.13□□□□□ -0.95
SOX2-OT-214ENST00000493116 KCTD17Q8N5Z5 321 aa9.13□□□□□ -0.95
SOX2-OT-214ENST00000493116 CCDC97Q96F63 343 aaPredicted RBP9.13□□□□□ -0.95
SOX2-OT-214ENST00000493116 SOCS7O14512 581 aa9.12□□□□□ -0.95
SOX2-OT-214ENST00000493116 CDAN1Q8IWY9 1227 aa9.12□□□□□ -0.95
SOX2-OT-214ENST00000493116 HS3ST6Q96QI5 342 aa9.12□□□□□ -0.95
SOX2-OT-214ENST00000493116 PHOX2BQ99453 314 aa9.12□□□□□ -0.95
SOX2-OT-214ENST00000493116 CDHR5Q9HBB8 845 aa9.12□□□□□ -0.95
SOX2-OT-214ENST00000493116 ZNF777Q9ULD5 760 aaPredicted RBP9.12□□□□□ -0.95
SOX2-OT-214ENST00000493116 ERBB3P21860 1342 aa9.11□□□□□ -0.95
SOX2-OT-214ENST00000493116 TUSC1Q2TAM9 212 aa9.11□□□□□ -0.95
SOX2-OT-214ENST00000493116 METTL3Q86U44 580 aaKnown RBP9.11□□□□□ -0.95
SOX2-OT-214ENST00000493116 PROCA1Q8NCQ7 364 aaPredicted RBP9.11□□□□□ -0.95
SOX2-OT-214ENST00000493116 PCDHGA10Q9Y5H3 936 aa9.11□□□□□ -0.95
SOX2-OT-214ENST00000493116 NUDT7P0C024 238 aa9.1□□□□□ -0.95
SOX2-OT-214ENST00000493116 CLK2P49760 499 aaKnown RBP9.1□□□□□ -0.95
SOX2-OT-214ENST00000493116 MYSM1Q5VVJ2 828 aa9.1□□□□□ -0.95
Retrieved 100 of 20,778 RNA–protein pairs in 12.3 ms