RNA–Protein interactions for RNA: ENST00000493030.6

TRIM11-204, Transcript of tripartite motif containing 11, humanhuman

TSL 1 (best) BASIC

Gene TRIM11, Length 5,774 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM11-204ENST00000493030 NLRP13Q86W25 1043 aa17.05■□□□□ 0.32
TRIM11-204ENST00000493030 HDAC5Q9UQL6 1122 aa17.05■□□□□ 0.32
TRIM11-204ENST00000493030 RRP7AQ9Y3A4 280 aaKnown RBP17.05■□□□□ 0.32
TRIM11-204ENST00000493030 G3V3G9 751 aa17.04■□□□□ 0.32
TRIM11-204ENST00000493030 DCAF8Q5TAQ9 597 aa17.04■□□□□ 0.32
TRIM11-204ENST00000493030 LMOD3Q0VAK6 560 aa17.04■□□□□ 0.32
TRIM11-204ENST00000493030 KIAA2012Q0VF49 1180 aa17.03■□□□□ 0.32
TRIM11-204ENST00000493030 FOXD4L1Q9NU39 408 aa17.03■□□□□ 0.32
TRIM11-204ENST00000493030 GTF2E1P29083 439 aaPredicted RBP17.03■□□□□ 0.32
TRIM11-204ENST00000493030 CADPSQ9ULU8 1353 aa17.02■□□□□ 0.32
TRIM11-204ENST00000493030 TOMM22Q9NS69 142 aa17.02■□□□□ 0.32
TRIM11-204ENST00000493030 FRAT2O75474 233 aaPredicted RBP17.02■□□□□ 0.31
TRIM11-204ENST00000493030 RSPH4AQ5TD94 716 aa17.02■□□□□ 0.31
TRIM11-204ENST00000493030 JPH4Q96JJ6 628 aa17.01■□□□□ 0.31
TRIM11-204ENST00000493030 PTMSP20962 102 aa17.01■□□□□ 0.31
TRIM11-204ENST00000493030 ELL2O00472 640 aaPredicted RBP17■□□□□ 0.31
TRIM11-204ENST00000493030 SYAP1Q96A49 352 aaPredicted RBP17■□□□□ 0.31
TRIM11-204ENST00000493030 RASSF8Q8NHQ8 419 aa17■□□□□ 0.31
TRIM11-204ENST00000493030 CCDC18Q5T9S5 1454 aa16.99■□□□□ 0.31
TRIM11-204ENST00000493030 ST20-MTHFSA0A0A6YYL1 179 aa16.99■□□□□ 0.31
TRIM11-204ENST00000493030 PANK3Q9H999 370 aa16.98■□□□□ 0.31
TRIM11-204ENST00000493030 BCL2L13Q9BXK5 485 aa16.97■□□□□ 0.31
TRIM11-204ENST00000493030 RAPGEF2Q9Y4G8 1499 aa16.96■□□□□ 0.31
TRIM11-204ENST00000493030 CREBRFQ8IUR6 639 aa16.96■□□□□ 0.31
TRIM11-204ENST00000493030 TPM4P67936 248 aa16.96■□□□□ 0.31
TRIM11-204ENST00000493030 PDE3BQ13370 1112 aa16.95■□□□□ 0.3
TRIM11-204ENST00000493030 NOC3LQ8WTT2 800 aaKnown RBP16.95■□□□□ 0.3
TRIM11-204ENST00000493030 ARID3AQ99856 593 aa16.95■□□□□ 0.3
TRIM11-204ENST00000493030 CCDC34Q96HJ3 373 aa16.95■□□□□ 0.3
TRIM11-204ENST00000493030 FOXD4L5Q5VV16 416 aaPredicted RBP16.94■□□□□ 0.3
TRIM11-204ENST00000493030 FOXD4L4Q8WXT5 416 aaPredicted RBP16.94■□□□□ 0.3
TRIM11-204ENST00000493030 CCDC144AA2RUR9 1427 aa16.94■□□□□ 0.3
TRIM11-204ENST00000493030 COG3Q96JB2 828 aa16.93■□□□□ 0.3
TRIM11-204ENST00000493030 PDE4CQ08493 712 aa16.93■□□□□ 0.3
TRIM11-204ENST00000493030 KIF15Q9NS87 1388 aa16.93■□□□□ 0.3
TRIM11-204ENST00000493030 C1orf141Q5JVX7 400 aa16.92■□□□□ 0.3
TRIM11-204ENST00000493030 KIF16BQ96L93 1317 aa16.92■□□□□ 0.3
TRIM11-204ENST00000493030 MYBBP1AQ9BQG0 1328 aaKnown RBP16.92■□□□□ 0.3
TRIM11-204ENST00000493030 RILPL2Q969X0 211 aa16.92■□□□□ 0.3
TRIM11-204ENST00000493030 PHLDB1Q86UU1 1377 aa16.91■□□□□ 0.3
TRIM11-204ENST00000493030 ST18O60284 1047 aa16.91■□□□□ 0.3
TRIM11-204ENST00000493030 VPS53Q5VIR6 699 aa16.91■□□□□ 0.3
TRIM11-204ENST00000493030 GOLGA6L3A6NEY3 463 aa16.91■□□□□ 0.3
TRIM11-204ENST00000493030 MINK1Q8N4C8 1332 aaPredicted RBP16.9■□□□□ 0.3
TRIM11-204ENST00000493030 EVA1CP58658 441 aa16.9■□□□□ 0.3
TRIM11-204ENST00000493030 NGEFQ8N5V2 710 aa16.9■□□□□ 0.3
TRIM11-204ENST00000493030 CSPP1Q1MSJ5 1256 aa16.9■□□□□ 0.3
TRIM11-204ENST00000493030 VGFO15240 615 aaPredicted RBP16.89■□□□□ 0.3
TRIM11-204ENST00000493030 MARCH6O60337 910 aa16.89■□□□□ 0.29
TRIM11-204ENST00000493030 IPO9Q96P70 1041 aaKnown RBP16.89■□□□□ 0.29
TRIM11-204ENST00000493030 CGNL1Q0VF96 1302 aa16.89■□□□□ 0.29
TRIM11-204ENST00000493030 PLIN1O60240 522 aa16.89■□□□□ 0.29
TRIM11-204ENST00000493030 SF3A1Q15459 793 aaKnown RBP16.89■□□□□ 0.29
TRIM11-204ENST00000493030 ANKRD45Q5TZF3 282 aa16.89■□□□□ 0.29
TRIM11-204ENST00000493030 TEFQ10587 303 aa16.88■□□□□ 0.29
TRIM11-204ENST00000493030 CYB5RLQ6IPT4 315 aa16.88■□□□□ 0.29
TRIM11-204ENST00000493030 EVC2Q86UK5 1308 aa16.88■□□□□ 0.29
TRIM11-204ENST00000493030 EIF2S2P20042 333 aaKnown RBP16.86■□□□□ 0.29
TRIM11-204ENST00000493030 MSH5O43196 834 aa16.85■□□□□ 0.29
TRIM11-204ENST00000493030 NCAPD3P42695 1498 aa16.85■□□□□ 0.29
TRIM11-204ENST00000493030 KIF3AQ9Y496 699 aa16.85■□□□□ 0.29
TRIM11-204ENST00000493030 UACAQ9BZF9 1416 aa16.85■□□□□ 0.29
TRIM11-204ENST00000493030 ZKSCAN2Q63HK3 967 aa16.84■□□□□ 0.29
TRIM11-204ENST00000493030 ZBTB4Q9P1Z0 1013 aaPredicted RBP16.84■□□□□ 0.29
TRIM11-204ENST00000493030 TTC5Q8N0Z6 440 aa16.84■□□□□ 0.29
TRIM11-204ENST00000493030 H3BQV1 296 aa16.84■□□□□ 0.29
TRIM11-204ENST00000493030 IFFO2Q5TF58 517 aa16.84■□□□□ 0.29
TRIM11-204ENST00000493030 NECTIN2Q92692 538 aa16.84■□□□□ 0.29
TRIM11-204ENST00000493030 FOXD4L6Q3SYB3 417 aaPredicted RBP16.83■□□□□ 0.29
TRIM11-204ENST00000493030 FOXD4L3Q6VB84 417 aaPredicted RBP16.83■□□□□ 0.29
TRIM11-204ENST00000493030 PRM3Q9NNZ6 103 aa16.83■□□□□ 0.28
TRIM11-204ENST00000493030 TSHZ2Q9NRE2 1034 aa16.83■□□□□ 0.28
TRIM11-204ENST00000493030 PTPRGP23470 1445 aa16.82■□□□□ 0.28
TRIM11-204ENST00000493030 E9PSI1 815 aa16.82■□□□□ 0.28
TRIM11-204ENST00000493030 COG6Q9Y2V7 657 aa16.82■□□□□ 0.28
TRIM11-204ENST00000493030 PES1O00541 588 aaKnown RBP16.81■□□□□ 0.28
TRIM11-204ENST00000493030 APAF1O14727 1248 aa16.81■□□□□ 0.28
TRIM11-204ENST00000493030 FAM184AQ8NB25 1140 aa16.81■□□□□ 0.28
TRIM11-204ENST00000493030 NEXNQ0ZGT2 675 aa16.81■□□□□ 0.28
TRIM11-204ENST00000493030 C9orf78Q9NZ63 289 aaPredicted RBP16.81■□□□□ 0.28
TRIM11-204ENST00000493030 SYTL4Q96C24 671 aaPredicted RBP16.81■□□□□ 0.28
TRIM11-204ENST00000493030 CENPQQ7L2Z9 268 aaPredicted RBP16.8■□□□□ 0.28
TRIM11-204ENST00000493030 USP47Q96K76 1375 aa16.8■□□□□ 0.28
TRIM11-204ENST00000493030 A0A0U1RQG5 324 aaPredicted RBP16.79■□□□□ 0.28
TRIM11-204ENST00000493030 PHF14O94880 888 aa16.79■□□□□ 0.28
TRIM11-204ENST00000493030 EXOC6Q8TAG9 804 aa16.79■□□□□ 0.28
TRIM11-204ENST00000493030 PRKRIP1Q9H875 184 aaPredicted RBP16.79■□□□□ 0.28
TRIM11-204ENST00000493030 AKAP17AQ02040 695 aaKnown RBP16.79■□□□□ 0.28
TRIM11-204ENST00000493030 CRBNQ96SW2 442 aa16.79■□□□□ 0.28
TRIM11-204ENST00000493030 ANO8Q9HCE9 1232 aaPredicted RBP16.79■□□□□ 0.28
TRIM11-204ENST00000493030 DIAPH3Q9NSV4 1193 aa16.79■□□□□ 0.28
TRIM11-204ENST00000493030 SLC4A3P48751 1232 aa16.79■□□□□ 0.28
TRIM11-204ENST00000493030 RAD21O60216 631 aa16.78■□□□□ 0.28
TRIM11-204ENST00000493030 DIAPH1O60610 1272 aaKnown RBP16.78■□□□□ 0.28
TRIM11-204ENST00000493030 PSME1Q06323 249 aa16.78■□□□□ 0.28
TRIM11-204ENST00000493030 FANCD2Q9BXW9 1451 aa16.78■□□□□ 0.28
TRIM11-204ENST00000493030 TPM3P06753 285 aa16.77■□□□□ 0.28
TRIM11-204ENST00000493030 CEP89Q96ST8 783 aa16.77■□□□□ 0.28
TRIM11-204ENST00000493030 DHX57Q6P158 1386 aaKnown RBP16.77■□□□□ 0.27
TRIM11-204ENST00000493030 TPD52L1Q16890 204 aaPredicted RBP16.77■□□□□ 0.27
Retrieved 100 of 20,778 RNA–protein pairs in 25.5 ms