RNA–Protein interactions for RNA: ENST00000492977.5

PTPN7-216, Transcript of protein tyrosine phosphatase, non-receptor type 7, humanhuman

TSL 1 (best)

Gene PTPN7, Length 1,595 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN7-216ENST00000492977 IQGAP3Q86VI3 1631 aa19.96■□□□□ 0.79
PTPN7-216ENST00000492977 MAPK8IP2Q13387 824 aaPredicted RBP19.96■□□□□ 0.79
PTPN7-216ENST00000492977 INO80Q9ULG1 1556 aaPredicted RBP19.96■□□□□ 0.79
PTPN7-216ENST00000492977 ATP7AQ04656 1500 aa19.95■□□□□ 0.78
PTPN7-216ENST00000492977 CYB5RLQ6IPT4 315 aa19.95■□□□□ 0.78
PTPN7-216ENST00000492977 MIER1Q8N108 512 aa19.95■□□□□ 0.78
PTPN7-216ENST00000492977 ZNF518AQ6AHZ1 1483 aa19.92■□□□□ 0.78
PTPN7-216ENST00000492977 GRWD1Q9BQ67 446 aaKnown RBP eCLIP19.91■□□□□ 0.78
PTPN7-216ENST00000492977 NEO1Q92859 1461 aa19.89■□□□□ 0.77
PTPN7-216ENST00000492977 DHX29Q7Z478 1369 aaKnown RBP19.87■□□□□ 0.77
PTPN7-216ENST00000492977 NBPF8Q3BBV2 869 aa19.87■□□□□ 0.77
PTPN7-216ENST00000492977 GLI2P10070 1586 aa19.86■□□□□ 0.77
PTPN7-216ENST00000492977 DEPDC5O75140 1603 aa19.86■□□□□ 0.77
PTPN7-216ENST00000492977 EIF2AK4Q9P2K8 1649 aaKnown RBP19.86■□□□□ 0.77
PTPN7-216ENST00000492977 POGZQ7Z3K3 1410 aa19.85■□□□□ 0.77
PTPN7-216ENST00000492977 KDM5CP41229 1560 aa19.85■□□□□ 0.77
PTPN7-216ENST00000492977 EIF4G2P78344 907 aaKnown RBP eCLIP19.85■□□□□ 0.77
PTPN7-216ENST00000492977 MYT1LQ9UL68 1186 aa19.85■□□□□ 0.77
PTPN7-216ENST00000492977 KIDINS220Q9ULH0 1771 aa19.85■□□□□ 0.77
PTPN7-216ENST00000492977 ATP10AO60312 1499 aa19.85■□□□□ 0.77
PTPN7-216ENST00000492977 HIRIP3Q9BW71 556 aaPredicted RBP19.83■□□□□ 0.77
PTPN7-216ENST00000492977 CCDC144AA2RUR9 1427 aa19.83■□□□□ 0.77
PTPN7-216ENST00000492977 MAP3K4Q9Y6R4 1608 aa19.83■□□□□ 0.76
PTPN7-216ENST00000492977 PLA2R1Q13018 1463 aa19.82■□□□□ 0.76
PTPN7-216ENST00000492977 MLH3Q9UHC1 1453 aa19.82■□□□□ 0.76
PTPN7-216ENST00000492977 HSPA5P11021 654 aaKnown RBP19.82■□□□□ 0.76
PTPN7-216ENST00000492977 UHRF1BP1Q6BDS2 1440 aa19.82■□□□□ 0.76
PTPN7-216ENST00000492977 KANK1Q14678 1352 aa19.8■□□□□ 0.76
PTPN7-216ENST00000492977 DDX10Q13206 875 aaKnown RBP19.79■□□□□ 0.76
PTPN7-216ENST00000492977 VWDEQ8N2E2 1590 aa19.79■□□□□ 0.76
PTPN7-216ENST00000492977 KIF3BO15066 747 aa19.78■□□□□ 0.76
PTPN7-216ENST00000492977 HECW2Q9P2P5 1572 aa19.78■□□□□ 0.76
PTPN7-216ENST00000492977 A2MP01023 1474 aa19.77■□□□□ 0.76
PTPN7-216ENST00000492977 TET3O43151 1660 aa19.77■□□□□ 0.76
PTPN7-216ENST00000492977 PRDM15P57071 1507 aaPredicted RBP19.76■□□□□ 0.75
PTPN7-216ENST00000492977 E9PCH4 1651 aa19.75■□□□□ 0.75
PTPN7-216ENST00000492977 SPATA31E1Q6ZUB1 1445 aa19.74■□□□□ 0.75
PTPN7-216ENST00000492977 DIP2BQ9P265 1576 aa19.73■□□□□ 0.75
PTPN7-216ENST00000492977 MROH1Q8NDA8 1641 aa19.73■□□□□ 0.75
PTPN7-216ENST00000492977 DCAF11Q8TEB1 546 aa19.73■□□□□ 0.75
PTPN7-216ENST00000492977 RALGAPBQ86X10 1494 aa19.73■□□□□ 0.75
PTPN7-216ENST00000492977 FAM69CQ0P6D2 419 aa19.72■□□□□ 0.75
PTPN7-216ENST00000492977 FOXD4L1Q9NU39 408 aa19.72■□□□□ 0.75
PTPN7-216ENST00000492977 PTPRTO14522 1441 aa19.72■□□□□ 0.75
PTPN7-216ENST00000492977 RNF17Q9BXT8 1623 aaKnown RBP19.72■□□□□ 0.75
PTPN7-216ENST00000492977 RNF216Q9NWF9 866 aaPredicted RBP19.71■□□□□ 0.75
PTPN7-216ENST00000492977 CENPBP07199 599 aaPredicted RBP19.7■□□□□ 0.74
PTPN7-216ENST00000492977 ZNF326Q5BKZ1 582 aaKnown RBP19.7■□□□□ 0.74
PTPN7-216ENST00000492977 BCORL1Q5H9F3 1711 aa19.7■□□□□ 0.74
PTPN7-216ENST00000492977 RICTORQ6R327 1708 aa19.7■□□□□ 0.74
PTPN7-216ENST00000492977 RAPGEF3O95398 923 aa19.7■□□□□ 0.74
PTPN7-216ENST00000492977 TRPM2O94759 1503 aa19.7■□□□□ 0.74
PTPN7-216ENST00000492977 KDM2AQ9Y2K7 1162 aa19.69■□□□□ 0.74
PTPN7-216ENST00000492977 FRMPD1Q5SYB0 1578 aa19.69■□□□□ 0.74
PTPN7-216ENST00000492977 SPHKAPQ2M3C7 1700 aa19.69■□□□□ 0.74
PTPN7-216ENST00000492977 ABCA6Q8N139 1617 aa19.68■□□□□ 0.74
PTPN7-216ENST00000492977 LMTK2Q8IWU2 1503 aa19.68■□□□□ 0.74
PTPN7-216ENST00000492977 WASHC2AQ641Q2 1341 aa19.68■□□□□ 0.74
PTPN7-216ENST00000492977 RGL3Q3MIN7 710 aa19.66■□□□□ 0.74
PTPN7-216ENST00000492977 USP47Q96K76 1375 aa19.65■□□□□ 0.74
PTPN7-216ENST00000492977 PRAG1Q86YV5 1406 aa19.65■□□□□ 0.74
PTPN7-216ENST00000492977 EFCAB6Q5THR3 1501 aa19.64■□□□□ 0.73
PTPN7-216ENST00000492977 DIP2CQ9Y2E4 1556 aa19.63■□□□□ 0.73
PTPN7-216ENST00000492977 POLR1AO95602 1720 aaPredicted RBP19.63■□□□□ 0.73
PTPN7-216ENST00000492977 STAC3Q96MF2 364 aa19.63■□□□□ 0.73
PTPN7-216ENST00000492977 CCDC7Q96M83 1385 aa19.63■□□□□ 0.73
PTPN7-216ENST00000492977 CEP152O94986 1710 aa19.63■□□□□ 0.73
PTPN7-216ENST00000492977 CARD11Q9BXL7 1154 aa19.62■□□□□ 0.73
PTPN7-216ENST00000492977 ANP32CO43423 234 aa19.61■□□□□ 0.73
PTPN7-216ENST00000492977 NEURL4Q96JN8 1562 aa19.61■□□□□ 0.73
PTPN7-216ENST00000492977 PPRC1Q5VV67 1664 aaKnown RBP19.61■□□□□ 0.73
PTPN7-216ENST00000492977 TRPM1Q7Z4N2 1603 aa19.61■□□□□ 0.73
PTPN7-216ENST00000492977 CLTCL1P53675 1640 aa19.6■□□□□ 0.73
PTPN7-216ENST00000492977 ZMYM4Q5VZL5 1548 aa19.6■□□□□ 0.73
PTPN7-216ENST00000492977 C11orf95C9JLR9 678 aaPredicted RBP19.6■□□□□ 0.73
PTPN7-216ENST00000492977 YTHDC1Q96MU7 727 aaKnown RBP19.59■□□□□ 0.73
PTPN7-216ENST00000492977 ROCK2O75116 1388 aaKnown RBP19.58■□□□□ 0.73
PTPN7-216ENST00000492977 ARID4BQ4LE39 1312 aaPredicted RBP19.58■□□□□ 0.73
PTPN7-216ENST00000492977 TSPOAP1O95153 1857 aa19.58■□□□□ 0.73
PTPN7-216ENST00000492977 GGT6Q6P531 493 aa19.57■□□□□ 0.72
PTPN7-216ENST00000492977 GPRASP1Q5JY77 1395 aa19.57■□□□□ 0.72
PTPN7-216ENST00000492977 CCER2I3L3R5 266 aa19.57■□□□□ 0.72
PTPN7-216ENST00000492977 KIF7Q2M1P5 1343 aa19.56■□□□□ 0.72
PTPN7-216ENST00000492977 LAMC1P11047 1609 aa19.56■□□□□ 0.72
PTPN7-216ENST00000492977 CNTLNQ9NXG0 1405 aa19.56■□□□□ 0.72
PTPN7-216ENST00000492977 YEATS2Q9ULM3 1422 aa19.55■□□□□ 0.72
PTPN7-216ENST00000492977 ABCC3O15438 1527 aa19.55■□□□□ 0.72
PTPN7-216ENST00000492977 WASHC2CQ9Y4E1 1318 aa19.54■□□□□ 0.72
PTPN7-216ENST00000492977 KIF13AQ9H1H9 1805 aa19.53■□□□□ 0.72
PTPN7-216ENST00000492977 NPATQ14207 1427 aa19.52■□□□□ 0.72
PTPN7-216ENST00000492977 KIF1BO60333 1816 aa19.52■□□□□ 0.71
PTPN7-216ENST00000492977 ZC3H13Q5T200 1668 aaKnown RBP19.5■□□□□ 0.71
PTPN7-216ENST00000492977 ST20-MTHFSA0A0A6YYL1 179 aa19.49■□□□□ 0.71
PTPN7-216ENST00000492977 NBPF1Q3BBV0 1214 aa19.49■□□□□ 0.71
PTPN7-216ENST00000492977 CAMSAP1Q5T5Y3 1602 aa19.49■□□□□ 0.71
PTPN7-216ENST00000492977 MADDQ8WXG6 1647 aa19.49■□□□□ 0.71
PTPN7-216ENST00000492977 ARHGAP31Q2M1Z3 1444 aa19.48■□□□□ 0.71
PTPN7-216ENST00000492977 REREQ9P2R6 1566 aa19.48■□□□□ 0.71
PTPN7-216ENST00000492977 UGGT1Q9NYU2 1555 aa19.46■□□□□ 0.71
PTPN7-216ENST00000492977 NOS1P29475 1434 aa19.45■□□□□ 0.7
Retrieved 100 of 20,778 RNA–protein pairs in 21.8 ms