RNA–Protein interactions for RNA: ENST00000492932.5

PDCD4-210, Transcript of programmed cell death 4, humanhuman

TSL 3

Gene PDCD4, Length 813 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDCD4-210ENST00000492932 ZNF142P52746 1687 aaPredicted RBP18.22■□□□□ 0.51
PDCD4-210ENST00000492932 PKD2Q13563 968 aa18.22■□□□□ 0.51
PDCD4-210ENST00000492932 KANK4Q5T7N3 995 aaPredicted RBP18.22■□□□□ 0.51
PDCD4-210ENST00000492932 MYOM3Q5VTT5 1437 aa18.22■□□□□ 0.51
PDCD4-210ENST00000492932 MIA2Q96PC5 1412 aa18.22■□□□□ 0.51
PDCD4-210ENST00000492932 NCKAP5LQ9HCH0 1330 aa18.21■□□□□ 0.51
PDCD4-210ENST00000492932 PLA2R1Q13018 1463 aa18.2■□□□□ 0.5
PDCD4-210ENST00000492932 TNRQ92752 1358 aa18.18■□□□□ 0.5
PDCD4-210ENST00000492932 A2ML1A8K2U0 1454 aa18.18■□□□□ 0.5
PDCD4-210ENST00000492932 MAST1Q9Y2H9 1570 aa18.17■□□□□ 0.5
PDCD4-210ENST00000492932 PZPP20742 1482 aa18.17■□□□□ 0.5
PDCD4-210ENST00000492932 FBXO31Q5XUX0 539 aaPredicted RBP18.15■□□□□ 0.5
PDCD4-210ENST00000492932 TCOF1Q13428 1488 aaKnown RBP18.14■□□□□ 0.49
PDCD4-210ENST00000492932 IQSEC2Q5JU85 1478 aa18.14■□□□□ 0.49
PDCD4-210ENST00000492932 DNMT1P26358 1616 aaKnown RBP18.12■□□□□ 0.49
PDCD4-210ENST00000492932 LTBP4Q8N2S1 1624 aa18.12■□□□□ 0.49
PDCD4-210ENST00000492932 EIF2AK4Q9P2K8 1649 aaKnown RBP18.12■□□□□ 0.49
PDCD4-210ENST00000492932 THEMISQ8N1K5 641 aaPredicted RBP18.11■□□□□ 0.49
PDCD4-210ENST00000492932 RNF17Q9BXT8 1623 aaKnown RBP18.11■□□□□ 0.49
PDCD4-210ENST00000492932 ZC3H13Q5T200 1668 aaKnown RBP18.11■□□□□ 0.49
PDCD4-210ENST00000492932 DUOX2Q9NRD8 1548 aa18.1■□□□□ 0.49
PDCD4-210ENST00000492932 NLRP1Q9C000 1473 aa18.1■□□□□ 0.49
PDCD4-210ENST00000492932 ZNF335Q9H4Z2 1342 aaPredicted RBP18.1■□□□□ 0.49
PDCD4-210ENST00000492932 PTPN23Q9H3S7 1636 aa18.09■□□□□ 0.49
PDCD4-210ENST00000492932 ANKLE2Q86XL3 938 aa18.08■□□□□ 0.48
PDCD4-210ENST00000492932 SHANK2Q9UPX8 1470 aa18.07■□□□□ 0.48
PDCD4-210ENST00000492932 UGGT1Q9NYU2 1555 aa18.07■□□□□ 0.48
PDCD4-210ENST00000492932 ABCC3O15438 1527 aa18.07■□□□□ 0.48
PDCD4-210ENST00000492932 KIF15Q9NS87 1388 aa18.06■□□□□ 0.48
PDCD4-210ENST00000492932 RRP7BPQ9NSQ0 103 aa18.06■□□□□ 0.48
PDCD4-210ENST00000492932 POLR1AO95602 1720 aaPredicted RBP18.06■□□□□ 0.48
PDCD4-210ENST00000492932 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP18.05■□□□□ 0.48
PDCD4-210ENST00000492932 FGD6Q6ZV73 1430 aa18.05■□□□□ 0.48
PDCD4-210ENST00000492932 ERBINQ96RT1 1412 aa18.05■□□□□ 0.48
PDCD4-210ENST00000492932 CROCC2H7BZ55 1655 aa18.04■□□□□ 0.48
PDCD4-210ENST00000492932 ABCC5O15440 1437 aa18.04■□□□□ 0.48
PDCD4-210ENST00000492932 DAPK1P53355 1430 aa18.04■□□□□ 0.48
PDCD4-210ENST00000492932 KANK1Q14678 1352 aa18.04■□□□□ 0.48
PDCD4-210ENST00000492932 UBAP1LF5GYI3 381 aa18.03■□□□□ 0.48
PDCD4-210ENST00000492932 SPATA31D1Q6ZQQ2 1576 aa18.02■□□□□ 0.48
PDCD4-210ENST00000492932 GRWD1Q9BQ67 446 aaKnown RBP eCLIP18.02■□□□□ 0.481e-6■■□□□ 14.5
PDCD4-210ENST00000492932 ANKRD30AQ9BXX3 1397 aa18.02■□□□□ 0.47
PDCD4-210ENST00000492932 ERVK-7P63135 1459 aa18.01■□□□□ 0.47
PDCD4-210ENST00000492932 CEP152O94986 1710 aa18.01■□□□□ 0.47
PDCD4-210ENST00000492932 CHIC2Q9UKJ5 165 aa18■□□□□ 0.47
PDCD4-210ENST00000492932 MROH1Q8NDA8 1641 aa18■□□□□ 0.47
PDCD4-210ENST00000492932 NEURL4Q96JN8 1562 aa17.99■□□□□ 0.47
PDCD4-210ENST00000492932 NPHP4O75161 1426 aaPredicted RBP17.98■□□□□ 0.47
PDCD4-210ENST00000492932 CPS1P31327 1500 aa17.98■□□□□ 0.47
PDCD4-210ENST00000492932 PRDM15P57071 1507 aaPredicted RBP17.98■□□□□ 0.47
PDCD4-210ENST00000492932 DEPDC5O75140 1603 aa17.98■□□□□ 0.47
PDCD4-210ENST00000492932 DISP3Q9P2K9 1392 aa17.97■□□□□ 0.47
PDCD4-210ENST00000492932 FAM50AQ14320 339 aaKnown RBP17.97■□□□□ 0.47
PDCD4-210ENST00000492932 ARHGAP31Q2M1Z3 1444 aa17.96■□□□□ 0.47
PDCD4-210ENST00000492932 MED14O60244 1454 aa17.95■□□□□ 0.46
PDCD4-210ENST00000492932 STAG3Q9UJ98 1225 aa17.95■□□□□ 0.46
PDCD4-210ENST00000492932 TOM1O60784 492 aa17.94■□□□□ 0.46
PDCD4-210ENST00000492932 SCAF1Q9H7N4 1312 aaKnown RBP17.94■□□□□ 0.46
PDCD4-210ENST00000492932 IQGAP1P46940 1657 aa17.93■□□□□ 0.46
PDCD4-210ENST00000492932 EID1Q9Y6B2 187 aa17.92■□□□□ 0.46
PDCD4-210ENST00000492932 CFAP65Q6ZU64 1925 aaKnown RBP17.91■□□□□ 0.46
PDCD4-210ENST00000492932 UBR1Q8IWV7 1749 aa17.9■□□□□ 0.46
PDCD4-210ENST00000492932 PIP4K2BP78356 416 aa17.89■□□□□ 0.45
PDCD4-210ENST00000492932 TXNDC2Q86VQ3 553 aa17.89■□□□□ 0.45
PDCD4-210ENST00000492932 SCAF11Q99590 1463 aaKnown RBP17.88■□□□□ 0.45
PDCD4-210ENST00000492932 VWDEQ8N2E2 1590 aa17.88■□□□□ 0.45
PDCD4-210ENST00000492932 ADGRL2O95490 1459 aa17.88■□□□□ 0.45
PDCD4-210ENST00000492932 LMTK2Q8IWU2 1503 aa17.88■□□□□ 0.45
PDCD4-210ENST00000492932 SLIT1O75093 1534 aa17.85■□□□□ 0.45
PDCD4-210ENST00000492932 ANKRD50Q9ULJ7 1429 aa17.85■□□□□ 0.45
PDCD4-210ENST00000492932 PIK3C2BO00750 1634 aa17.83■□□□□ 0.45
PDCD4-210ENST00000492932 ARHGAP23Q9P227 1491 aa17.83■□□□□ 0.45
PDCD4-210ENST00000492932 EFCAB6Q5THR3 1501 aa17.82■□□□□ 0.44
PDCD4-210ENST00000492932 TMEM2Q9UHN6 1383 aa17.82■□□□□ 0.44
PDCD4-210ENST00000492932 LTKP29376 864 aa17.82■□□□□ 0.44
PDCD4-210ENST00000492932 SYNMO15061 1565 aa17.82■□□□□ 0.44
PDCD4-210ENST00000492932 IDI1Q13907 227 aa17.81■□□□□ 0.44
PDCD4-210ENST00000492932 SLC52A1Q9NWF4 448 aa17.81■□□□□ 0.44
PDCD4-210ENST00000492932 KDM5AP29375 1690 aaKnown RBP17.8■□□□□ 0.44
PDCD4-210ENST00000492932 BCANQ96GW7 911 aa17.79■□□□□ 0.44
PDCD4-210ENST00000492932 RPRD2Q5VT52 1461 aaKnown RBP17.79■□□□□ 0.44
PDCD4-210ENST00000492932 LRRC7Q96NW7 1537 aa17.78■□□□□ 0.44
PDCD4-210ENST00000492932 HSPA1LP34931 641 aa17.78■□□□□ 0.44
PDCD4-210ENST00000492932 NOS1P29475 1434 aa17.78■□□□□ 0.44
PDCD4-210ENST00000492932 HDGFP51858 240 aaKnown RBP17.77■□□□□ 0.44
PDCD4-210ENST00000492932 ILDR2Q71H61 639 aa17.76■□□□□ 0.43
PDCD4-210ENST00000492932 ADGRB3O60242 1522 aa17.76■□□□□ 0.43
PDCD4-210ENST00000492932 ITGAEP38570 1179 aa17.75■□□□□ 0.43
PDCD4-210ENST00000492932 STRCP1A6NGW2 1772 aa17.75■□□□□ 0.43
PDCD4-210ENST00000492932 ROCK1Q13464 1354 aa17.75■□□□□ 0.43
PDCD4-210ENST00000492932 TET3O43151 1660 aa17.74■□□□□ 0.43
PDCD4-210ENST00000492932 PPP1R15AO75807 674 aaPredicted RBP17.73■□□□□ 0.43
PDCD4-210ENST00000492932 UNC13BO14795 1591 aa17.72■□□□□ 0.43
PDCD4-210ENST00000492932 SOCS7O14512 581 aa17.72■□□□□ 0.43
PDCD4-210ENST00000492932 GCC2Q8IWJ2 1684 aa17.71■□□□□ 0.43
PDCD4-210ENST00000492932 CHGAP10645 457 aaKnown RBP17.71■□□□□ 0.43
PDCD4-210ENST00000492932 PPARGC1BQ86YN6 1023 aaKnown RBP17.71■□□□□ 0.43
PDCD4-210ENST00000492932 SLC26A8Q96RN1 970 aa17.71■□□□□ 0.43
PDCD4-210ENST00000492932 KCNA6P17658 529 aa17.7■□□□□ 0.42
PDCD4-210ENST00000492932 SENP3Q9H4L4 574 aaPredicted RBP17.7■□□□□ 0.42
Retrieved 100 of 20,778 RNA–protein pairs in 44 ms