RNA–Protein interactions for RNA: ENST00000492840.1

SND1-216, Transcript of staphylococcal nuclease and tudor domain containing 1, humanhuman

TSL 5

Gene SND1, Length 472 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SND1-216ENST00000492840 MDM2Q00987 491 aaPredicted RBP8.88□□□□□ -0.99
SND1-216ENST00000492840 CHRDL2Q6WN34 429 aa8.87□□□□□ -0.99
SND1-216ENST00000492840 PROCA1Q8NCQ7 364 aaPredicted RBP8.87□□□□□ -0.99
SND1-216ENST00000492840 BOLA1Q9Y3E2 137 aa8.87□□□□□ -0.99
SND1-216ENST00000492840 SPDYE5A6NIY4 337 aa8.86□□□□□ -0.99
SND1-216ENST00000492840 EVI5O60447 810 aa8.86□□□□□ -0.99
SND1-216ENST00000492840 SSTR3P32745 418 aaPredicted RBP8.86□□□□□ -0.99
SND1-216ENST00000492840 PHOX2BQ99453 314 aa8.86□□□□□ -0.99
SND1-216ENST00000492840 CDHR5Q9HBB8 845 aa8.86□□□□□ -0.99
SND1-216ENST00000492840 PLSCR2Q9NRY7 297 aa8.86□□□□□ -0.99
SND1-216ENST00000492840 COG6Q9Y2V7 657 aa8.86□□□□□ -0.99
SND1-216ENST00000492840 TBC1D12O60347 775 aa8.85□□□□□ -0.99
SND1-216ENST00000492840 BEGAINQ9BUH8 593 aa8.85□□□□□ -0.99
SND1-216ENST00000492840 RETREG2Q8NC44 543 aa8.84□□□□□ -0.99
SND1-216ENST00000492840 GNL3Q9BVP2 549 aaKnown RBP eCLIP8.84□□□□□ -0.99
SND1-216ENST00000492840 NPDC1Q9NQX5 325 aaPredicted RBP8.84□□□□□ -0.99
SND1-216ENST00000492840 NACADO15069 1562 aa8.83□□□□□ -1
SND1-216ENST00000492840 AEBP1Q8IUX7 1158 aa8.83□□□□□ -1
SND1-216ENST00000492840 POLR3EQ9NVU0 708 aa8.83□□□□□ -1
SND1-216ENST00000492840 IRX5P78411 483 aaPredicted RBP8.82□□□□□ -1
SND1-216ENST00000492840 EN1Q05925 392 aaPredicted RBP8.82□□□□□ -1
SND1-216ENST00000492840 FAM217BQ9NTX9 383 aaPredicted RBP8.82□□□□□ -1
SND1-216ENST00000492840 ATP1B4Q9UN42 357 aaPredicted RBP8.82□□□□□ -1
SND1-216ENST00000492840 UNC13AQ9UPW8 1703 aa8.82□□□□□ -1
SND1-216ENST00000492840 G3V3G9 751 aa8.81□□□□□ -1
SND1-216ENST00000492840 MYSM1Q5VVJ2 828 aa8.81□□□□□ -1
SND1-216ENST00000492840 TMEM92Q6UXU6 159 aa8.81□□□□□ -1
SND1-216ENST00000492840 BANK1Q8NDB2 785 aa8.8□□□□□ -1
SND1-216ENST00000492840 CECR2Q9BXF3 1484 aa8.8□□□□□ -1
SND1-216ENST00000492840 CLK2P49760 499 aaKnown RBP8.79□□□□□ -1
SND1-216ENST00000492840 SNRKQ9NRH2 765 aa8.79□□□□□ -1
SND1-216ENST00000492840 ZNF330Q9Y3S2 320 aaPredicted RBP8.79□□□□□ -1
SND1-216ENST00000492840 C19orf67A6NJJ6 358 aa8.78□□□□□ -1
SND1-216ENST00000492840 RFC5P40937 340 aa8.78□□□□□ -1
SND1-216ENST00000492840 OCEL1Q9H607 264 aa8.78□□□□□ -1
SND1-216ENST00000492840 MAP3K7O43318 606 aa8.77□□□□□ -1.01
SND1-216ENST00000492840 IRF5Q13568 498 aa8.77□□□□□ -1.01
SND1-216ENST00000492840 RGS22Q8NE09 1264 aa8.77□□□□□ -1.01
SND1-216ENST00000492840 PHF14O94880 888 aa8.76□□□□□ -1.01
SND1-216ENST00000492840 TMCO4Q5TGY1 634 aa8.76□□□□□ -1.01
SND1-216ENST00000492840 METTL3Q86U44 580 aaKnown RBP8.76□□□□□ -1.01
SND1-216ENST00000492840 EPAS1Q99814 870 aa8.76□□□□□ -1.01
SND1-216ENST00000492840 ANO8Q9HCE9 1232 aaPredicted RBP8.76□□□□□ -1.01
SND1-216ENST00000492840 BICRAQ9NZM4 1560 aa8.76□□□□□ -1.01
SND1-216ENST00000492840 GALR2O43603 387 aaPredicted RBP8.75□□□□□ -1.01
SND1-216ENST00000492840 FBXO31Q5XUX0 539 aaPredicted RBP8.75□□□□□ -1.01
SND1-216ENST00000492840 PTCD2Q8WV60 388 aaKnown RBP8.75□□□□□ -1.01
SND1-216ENST00000492840 NLRP7Q8WX94 980 aa8.75□□□□□ -1.01
SND1-216ENST00000492840 CC2D2AQ9P2K1 1620 aa8.75□□□□□ -1.01
SND1-216ENST00000492840 PPP1R15AO75807 674 aaPredicted RBP8.74□□□□□ -1.01
SND1-216ENST00000492840 ATN1P54259 1190 aaPredicted RBP8.74□□□□□ -1.01
SND1-216ENST00000492840 FAM161AQ3B820 660 aa8.74□□□□□ -1.01
SND1-216ENST00000492840 IER5LQ5T953 404 aa8.74□□□□□ -1.01
SND1-216ENST00000492840 TSR1Q2NL82 804 aaKnown RBP8.73□□□□□ -1.01
SND1-216ENST00000492840 RBM33Q96EV2 1170 aaKnown RBP8.73□□□□□ -1.01
SND1-216ENST00000492840 TBC1D2Q9BYX2 928 aa8.73□□□□□ -1.01
SND1-216ENST00000492840 GZF1Q9H116 711 aaPredicted RBP8.73□□□□□ -1.01
SND1-216ENST00000492840 OATP04181 439 aa8.72□□□□□ -1.01
SND1-216ENST00000492840 MFAP1P55081 439 aaKnown RBP8.72□□□□□ -1.01
SND1-216ENST00000492840 TMEM259Q4ZIN3 620 aa8.72□□□□□ -1.01
SND1-216ENST00000492840 PPP2R2DQ66LE6 453 aa8.72□□□□□ -1.01
SND1-216ENST00000492840 MTMR14Q8NCE2 650 aa8.72□□□□□ -1.01
SND1-216ENST00000492840 MTMR7Q9Y216 660 aa8.72□□□□□ -1.01
SND1-216ENST00000492840 PXYLP1Q8TE99 480 aa8.71□□□□□ -1.02
SND1-216ENST00000492840 L3MBTL3Q96JM7 780 aaPredicted RBP8.71□□□□□ -1.02
SND1-216ENST00000492840 GDPD2Q9HCC8 539 aa8.71□□□□□ -1.02
SND1-216ENST00000492840 LIMD1Q9UGP4 676 aa8.71□□□□□ -1.02
SND1-216ENST00000492840 PLCG2P16885 1265 aa8.7□□□□□ -1.02
SND1-216ENST00000492840 PCDHGA10Q9Y5H3 936 aa8.7□□□□□ -1.02
SND1-216ENST00000492840 ADGRG1Q9Y653 693 aa8.7□□□□□ -1.02
SND1-216ENST00000492840 DIXDC1Q155Q3 683 aa8.69□□□□□ -1.02
SND1-216ENST00000492840 PADI6Q6TGC4 694 aa8.69□□□□□ -1.02
SND1-216ENST00000492840 SLAIN1Q8ND83 568 aa8.69□□□□□ -1.02
SND1-216ENST00000492840 CALR3Q96L12 384 aaKnown RBP8.69□□□□□ -1.02
SND1-216ENST00000492840 SOCS7O14512 581 aa8.68□□□□□ -1.02
SND1-216ENST00000492840 TYW1BQ6NUM6 668 aa8.68□□□□□ -1.02
SND1-216ENST00000492840 WWC1Q8IX03 1113 aa8.68□□□□□ -1.02
SND1-216ENST00000492840 GLMNQ92990 594 aa8.68□□□□□ -1.02
SND1-216ENST00000492840 SHROOM4Q9ULL8 1493 aa8.68□□□□□ -1.02
SND1-216ENST00000492840 POM121CA8CG34 1229 aa8.67□□□□□ -1.02
SND1-216ENST00000492840 ATMINO43313 823 aaPredicted RBP8.67□□□□□ -1.02
SND1-216ENST00000492840 SLC34A2O95436 690 aa8.67□□□□□ -1.02
SND1-216ENST00000492840 ABL2P42684 1182 aa8.66□□□□□ -1.02
SND1-216ENST00000492840 PDE4CQ08493 712 aa8.66□□□□□ -1.02
SND1-216ENST00000492840 ASTLQ6HA08 431 aaPredicted RBP8.66□□□□□ -1.02
SND1-216ENST00000492840 RIC3Q7Z5B4 369 aa8.66□□□□□ -1.02
SND1-216ENST00000492840 ACIN1Q9UKV3 1341 aaKnown RBP8.65□□□□□ -1.02
SND1-216ENST00000492840 TUSC1Q2TAM9 212 aa8.65□□□□□ -1.02
SND1-216ENST00000492840 FOXD4L5Q5VV16 416 aaPredicted RBP8.65□□□□□ -1.02
SND1-216ENST00000492840 FOXD4L4Q8WXT5 416 aaPredicted RBP8.65□□□□□ -1.02
SND1-216ENST00000492840 TTC13Q8NBP0 860 aa8.64□□□□□ -1.03
SND1-216ENST00000492840 CERKQ8TCT0 537 aa8.64□□□□□ -1.03
SND1-216ENST00000492840 SPIRE2Q8WWL2 714 aa8.64□□□□□ -1.03
SND1-216ENST00000492840 FBXW7Q969H0 707 aa8.64□□□□□ -1.03
SND1-216ENST00000492840 TBC1D2BQ9UPU7 963 aa8.64□□□□□ -1.03
SND1-216ENST00000492840 CUX2O14529 1486 aa8.64□□□□□ -1.03
SND1-216ENST00000492840 PATL2C9JE40 543 aaKnown RBP8.63□□□□□ -1.03
SND1-216ENST00000492840 RBM27Q9P2N5 1060 aaKnown RBP8.63□□□□□ -1.03
SND1-216ENST00000492840 SPTLC1O15269 473 aa8.62□□□□□ -1.03
SND1-216ENST00000492840 JPH4Q96JJ6 628 aa8.62□□□□□ -1.03
Retrieved 100 of 20,778 RNA–protein pairs in 53.9 ms