RNA–Protein interactions for RNA: ENST00000492423.5

COPS7B-222, Transcript of COP9 signalosome subunit 7B, humanhuman

TSL 2

Gene COPS7B, Length 689 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COPS7B-222ENST00000492423 RAPGEF3O95398 923 aa22.11■■□□□ 1.13
COPS7B-222ENST00000492423 KDM5DQ9BY66 1539 aa22.11■■□□□ 1.13
COPS7B-222ENST00000492423 DEPDC5O75140 1603 aa22.09■■□□□ 1.13
COPS7B-222ENST00000492423 BCORL1Q5H9F3 1711 aa22.09■■□□□ 1.13
COPS7B-222ENST00000492423 CCER1Q8TC90 406 aaPredicted RBP22.08■■□□□ 1.13
COPS7B-222ENST00000492423 MAGI2Q86UL8 1455 aa22.07■■□□□ 1.12
COPS7B-222ENST00000492423 PZPP20742 1482 aa22.06■■□□□ 1.12
COPS7B-222ENST00000492423 YEATS2Q9ULM3 1422 aa22.06■■□□□ 1.12
COPS7B-222ENST00000492423 A2MP01023 1474 aa22.05■■□□□ 1.12
COPS7B-222ENST00000492423 ARHGEF40Q8TER5 1519 aa22.05■■□□□ 1.12
COPS7B-222ENST00000492423 IQGAP3Q86VI3 1631 aa22.04■■□□□ 1.12
COPS7B-222ENST00000492423 RNF17Q9BXT8 1623 aaKnown RBP22.04■■□□□ 1.12
COPS7B-222ENST00000492423 ACIN1Q9UKV3 1341 aaKnown RBP22.04■■□□□ 1.12
COPS7B-222ENST00000492423 DHX29Q7Z478 1369 aaKnown RBP22.03■■□□□ 1.12
COPS7B-222ENST00000492423 MROH1Q8NDA8 1641 aa22.03■■□□□ 1.12
COPS7B-222ENST00000492423 REREQ9P2R6 1566 aa22.02■■□□□ 1.12
COPS7B-222ENST00000492423 MYT1LQ9UL68 1186 aa22.01■■□□□ 1.11
COPS7B-222ENST00000492423 CACNB1Q02641 598 aaPredicted RBP22■■□□□ 1.11
COPS7B-222ENST00000492423 PPP4R3CPQ6ZMV5 832 aa22■■□□□ 1.11
COPS7B-222ENST00000492423 TRIM52Q96A61 297 aa21.99■■□□□ 1.11
COPS7B-222ENST00000492423 SIGLEC1Q9BZZ2 1709 aa21.99■■□□□ 1.11
COPS7B-222ENST00000492423 PRDM15P57071 1507 aaPredicted RBP21.99■■□□□ 1.11
COPS7B-222ENST00000492423 FAM135AQ9P2D6 1515 aa21.98■■□□□ 1.11
COPS7B-222ENST00000492423 VWDEQ8N2E2 1590 aa21.98■■□□□ 1.11
COPS7B-222ENST00000492423 CLSPNQ9HAW4 1339 aa21.97■■□□□ 1.11
COPS7B-222ENST00000492423 ATP10AO60312 1499 aa21.95■■□□□ 1.1
COPS7B-222ENST00000492423 DCAF8L1A6NGE4 600 aa21.94■■□□□ 1.1
COPS7B-222ENST00000492423 NUP155O75694 1391 aa21.94■■□□□ 1.1
COPS7B-222ENST00000492423 CEP152O94986 1710 aa21.94■■□□□ 1.1
COPS7B-222ENST00000492423 MPHOSPH9Q99550 1183 aa21.93■■□□□ 1.1
COPS7B-222ENST00000492423 TET3O43151 1660 aa21.91■■□□□ 1.1
COPS7B-222ENST00000492423 AGLP35573 1532 aa21.9■■□□□ 1.1
COPS7B-222ENST00000492423 E9PCH4 1651 aa21.88■■□□□ 1.09
COPS7B-222ENST00000492423 KIF3BO15066 747 aa21.88■■□□□ 1.09
COPS7B-222ENST00000492423 SLC4A1APQ9BWU0 796 aaKnown RBP21.87■■□□□ 1.09
COPS7B-222ENST00000492423 ZC3H13Q5T200 1668 aaKnown RBP21.86■■□□□ 1.09
COPS7B-222ENST00000492423 ZEB1P37275 1124 aaPredicted RBP21.85■■□□□ 1.09
COPS7B-222ENST00000492423 LMTK2Q8IWU2 1503 aa21.85■■□□□ 1.09
COPS7B-222ENST00000492423 GRWD1Q9BQ67 446 aaKnown RBP eCLIP21.84■■□□□ 1.09
COPS7B-222ENST00000492423 ABCC3O15438 1527 aa21.82■■□□□ 1.08
COPS7B-222ENST00000492423 CAMSAP1Q5T5Y3 1602 aa21.82■■□□□ 1.08
COPS7B-222ENST00000492423 HOXD11P31277 338 aaPredicted RBP21.82■■□□□ 1.08
COPS7B-222ENST00000492423 ANKRD30BQ9BXX2 1392 aa21.82■■□□□ 1.08
COPS7B-222ENST00000492423 EFCAB6Q5THR3 1501 aa21.81■■□□□ 1.08
COPS7B-222ENST00000492423 PKD2Q13563 968 aa21.81■■□□□ 1.08
COPS7B-222ENST00000492423 KANK1Q14678 1352 aa21.81■■□□□ 1.08
COPS7B-222ENST00000492423 SPHKAPQ2M3C7 1700 aa21.8■■□□□ 1.08
COPS7B-222ENST00000492423 SIN3AQ96ST3 1273 aa21.77■■□□□ 1.08
COPS7B-222ENST00000492423 CLTCQ00610 1675 aaKnown RBP21.74■■□□□ 1.07
COPS7B-222ENST00000492423 PLA2R1Q13018 1463 aa21.73■■□□□ 1.07
COPS7B-222ENST00000492423 GGT6Q6P531 493 aa21.73■■□□□ 1.07
COPS7B-222ENST00000492423 RPRD2Q5VT52 1461 aaKnown RBP21.72■■□□□ 1.07
COPS7B-222ENST00000492423 TRPM2O94759 1503 aa21.7■■□□□ 1.07
COPS7B-222ENST00000492423 CFAP65Q6ZU64 1925 aaKnown RBP21.69■■□□□ 1.06
COPS7B-222ENST00000492423 PTPRTO14522 1441 aa21.68■■□□□ 1.06
COPS7B-222ENST00000492423 CLTCL1P53675 1640 aa21.68■■□□□ 1.06
COPS7B-222ENST00000492423 NPATQ14207 1427 aa21.67■■□□□ 1.06
COPS7B-222ENST00000492423 NEUROD1Q13562 356 aa21.67■■□□□ 1.06
COPS7B-222ENST00000492423 PREX1Q8TCU6 1659 aa21.66■■□□□ 1.06
COPS7B-222ENST00000492423 CNKSR2Q8WXI2 1034 aa21.66■■□□□ 1.06
COPS7B-222ENST00000492423 ARHGAP31Q2M1Z3 1444 aa21.65■■□□□ 1.06
COPS7B-222ENST00000492423 MROH2AA6NES4 1674 aa21.65■■□□□ 1.06
COPS7B-222ENST00000492423 FER1L4A9Z1Z3 1794 aa21.64■■□□□ 1.06
COPS7B-222ENST00000492423 WASHC2CQ9Y4E1 1318 aa21.64■■□□□ 1.05
COPS7B-222ENST00000492423 KDM4FA0A1W2PPD8 638 aa21.64■■□□□ 1.05
COPS7B-222ENST00000492423 SYNMO15061 1565 aa21.61■■□□□ 1.05
COPS7B-222ENST00000492423 CCDC144AA2RUR9 1427 aa21.61■■□□□ 1.05
COPS7B-222ENST00000492423 TONSLQ96HA7 1378 aa21.61■■□□□ 1.05
COPS7B-222ENST00000492423 KIF1BO60333 1816 aa21.6■■□□□ 1.05
COPS7B-222ENST00000492423 PIK3C2BO00750 1634 aa21.6■■□□□ 1.05
COPS7B-222ENST00000492423 TIMELESSQ9UNS1 1208 aa21.6■■□□□ 1.05
COPS7B-222ENST00000492423 NOS1P29475 1434 aa21.6■■□□□ 1.05
COPS7B-222ENST00000492423 UGGT1Q9NYU2 1555 aa21.6■■□□□ 1.05
COPS7B-222ENST00000492423 MLECQ14165 292 aa21.59■■□□□ 1.05
COPS7B-222ENST00000492423 RNF39Q9H2S5 420 aa21.59■■□□□ 1.05
COPS7B-222ENST00000492423 ARID4BQ4LE39 1312 aaPredicted RBP21.57■■□□□ 1.04
COPS7B-222ENST00000492423 CNTLNQ9NXG0 1405 aa21.57■■□□□ 1.04
COPS7B-222ENST00000492423 RNF216Q9NWF9 866 aaPredicted RBP21.56■■□□□ 1.04
COPS7B-222ENST00000492423 SPATA31D1Q6ZQQ2 1576 aa21.56■■□□□ 1.04
COPS7B-222ENST00000492423 NEURL4Q96JN8 1562 aa21.56■■□□□ 1.04
COPS7B-222ENST00000492423 ERVK-7P63135 1459 aa21.55■■□□□ 1.04
COPS7B-222ENST00000492423 ADAMTSL3P82987 1691 aa21.54■■□□□ 1.04
COPS7B-222ENST00000492423 C3P01024 1663 aa21.53■■□□□ 1.04
COPS7B-222ENST00000492423 MADDQ8WXG6 1647 aa21.53■■□□□ 1.04
COPS7B-222ENST00000492423 SPATA31E1Q6ZUB1 1445 aa21.52■■□□□ 1.04
COPS7B-222ENST00000492423 IFT172Q9UG01 1749 aa21.52■■□□□ 1.03
COPS7B-222ENST00000492423 RIMS1Q86UR5 1692 aaKnown RBP21.5■■□□□ 1.03
COPS7B-222ENST00000492423 ADGRB3O60242 1522 aa21.5■■□□□ 1.03
COPS7B-222ENST00000492423 L3MBTL2Q969R5 705 aa21.5■■□□□ 1.03
COPS7B-222ENST00000492423 MYO5BQ9ULV0 1848 aa21.5■■□□□ 1.03
COPS7B-222ENST00000492423 PPP1R15AO75807 674 aaPredicted RBP21.48■■□□□ 1.03
COPS7B-222ENST00000492423 ZMYM3Q14202 1370 aa21.47■■□□□ 1.03
COPS7B-222ENST00000492423 PPLO60437 1756 aa21.44■■□□□ 1.02
COPS7B-222ENST00000492423 FBXO31Q5XUX0 539 aaPredicted RBP21.43■■□□□ 1.02
COPS7B-222ENST00000492423 ESF1Q9H501 851 aaKnown RBP21.43■■□□□ 1.02
COPS7B-222ENST00000492423 TMEM131LA2VDJ0 1609 aa21.43■■□□□ 1.02
COPS7B-222ENST00000492423 UHRF1BP1Q6BDS2 1440 aa21.4■■□□□ 1.02
COPS7B-222ENST00000492423 TRPM1Q7Z4N2 1603 aa21.38■■□□□ 1.01
COPS7B-222ENST00000492423 KDM5AP29375 1690 aaKnown RBP21.37■■□□□ 1.01
COPS7B-222ENST00000492423 NBPF8Q3BBV2 869 aa21.37■■□□□ 1.01
Retrieved 100 of 20,778 RNA–protein pairs in 18.4 ms