RNA–Protein interactions for RNA: ENST00000492407.1

HDAC3-212, Transcript of histone deacetylase 3, humanhuman

TSL 5

Gene HDAC3, Length 782 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC3-212ENST00000492407 NCKAP5LQ9HCH0 1330 aa14.46□□□□□ -0.09
HDAC3-212ENST00000492407 WASHC2CQ9Y4E1 1318 aa14.46□□□□□ -0.09
HDAC3-212ENST00000492407 A2ML1A8K2U0 1454 aa14.46□□□□□ -0.09
HDAC3-212ENST00000492407 CEP170BQ9Y4F5 1589 aaPredicted RBP14.46□□□□□ -0.09
HDAC3-212ENST00000492407 MYO3AQ8NEV4 1616 aa14.45□□□□□ -0.1
HDAC3-212ENST00000492407 MIA2Q96PC5 1412 aa14.45□□□□□ -0.1
HDAC3-212ENST00000492407 PZPP20742 1482 aa14.44□□□□□ -0.1
HDAC3-212ENST00000492407 KDM5DQ9BY66 1539 aa14.44□□□□□ -0.1
HDAC3-212ENST00000492407 TNRQ92752 1358 aa14.44□□□□□ -0.1
HDAC3-212ENST00000492407 LOC105371045A0A1W2PR82 267 aa14.41□□□□□ -0.1
HDAC3-212ENST00000492407 THEMISQ8N1K5 641 aaPredicted RBP14.41□□□□□ -0.1
HDAC3-212ENST00000492407 MAST1Q9Y2H9 1570 aa14.4□□□□□ -0.1
HDAC3-212ENST00000492407 NLRP1Q9C000 1473 aa14.4□□□□□ -0.1
HDAC3-212ENST00000492407 FBXO31Q5XUX0 539 aaPredicted RBP14.4□□□□□ -0.1
HDAC3-212ENST00000492407 DNMT1P26358 1616 aaKnown RBP14.4□□□□□ -0.1
HDAC3-212ENST00000492407 MYOM3Q5VTT5 1437 aa14.4□□□□□ -0.1
HDAC3-212ENST00000492407 ZNF335Q9H4Z2 1342 aaPredicted RBP14.4□□□□□ -0.1
HDAC3-212ENST00000492407 ANKLE2Q86XL3 938 aa14.39□□□□□ -0.11
HDAC3-212ENST00000492407 KANK4Q5T7N3 995 aaPredicted RBP14.38□□□□□ -0.11
HDAC3-212ENST00000492407 RNF17Q9BXT8 1623 aaKnown RBP14.35□□□□□ -0.11
HDAC3-212ENST00000492407 EIF2AK4Q9P2K8 1649 aaKnown RBP14.35□□□□□ -0.11
HDAC3-212ENST00000492407 APLP2Q06481 763 aa14.35□□□□□ -0.11
HDAC3-212ENST00000492407 MED14O60244 1454 aa14.34□□□□□ -0.11
HDAC3-212ENST00000492407 UBAP1LF5GYI3 381 aa14.34□□□□□ -0.11
HDAC3-212ENST00000492407 CPS1P31327 1500 aa14.34□□□□□ -0.11
HDAC3-212ENST00000492407 DISP3Q9P2K9 1392 aa14.34□□□□□ -0.11
HDAC3-212ENST00000492407 ABCC3O15438 1527 aa14.33□□□□□ -0.12
HDAC3-212ENST00000492407 DUOX2Q9NRD8 1548 aa14.33□□□□□ -0.12
HDAC3-212ENST00000492407 ZC3H13Q5T200 1668 aaKnown RBP14.33□□□□□ -0.12
HDAC3-212ENST00000492407 SHANK2Q9UPX8 1470 aa14.32□□□□□ -0.12
HDAC3-212ENST00000492407 UGGT1Q9NYU2 1555 aa14.32□□□□□ -0.12
HDAC3-212ENST00000492407 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP14.32□□□□□ -0.12
HDAC3-212ENST00000492407 ARHGAP31Q2M1Z3 1444 aa14.32□□□□□ -0.12
HDAC3-212ENST00000492407 SPATA31D1Q6ZQQ2 1576 aa14.31□□□□□ -0.12
HDAC3-212ENST00000492407 NEURL4Q96JN8 1562 aa14.3□□□□□ -0.12
HDAC3-212ENST00000492407 DEPDC5O75140 1603 aa14.3□□□□□ -0.12
HDAC3-212ENST00000492407 TOM1O60784 492 aa14.3□□□□□ -0.12
HDAC3-212ENST00000492407 NPHP4O75161 1426 aaPredicted RBP14.3□□□□□ -0.12
HDAC3-212ENST00000492407 ERBINQ96RT1 1412 aa14.3□□□□□ -0.12
HDAC3-212ENST00000492407 ABCC5O15440 1437 aa14.29□□□□□ -0.12
HDAC3-212ENST00000492407 ERVK-7P63135 1459 aa14.29□□□□□ -0.12
HDAC3-212ENST00000492407 POLR1AO95602 1720 aaPredicted RBP14.28□□□□□ -0.12
HDAC3-212ENST00000492407 KIF15Q9NS87 1388 aa14.28□□□□□ -0.12
HDAC3-212ENST00000492407 MROH1Q8NDA8 1641 aa14.26□□□□□ -0.13
HDAC3-212ENST00000492407 SOCS7O14512 581 aa14.26□□□□□ -0.13
HDAC3-212ENST00000492407 RRP7BPQ9NSQ0 103 aa14.25□□□□□ -0.13
HDAC3-212ENST00000492407 VWDEQ8N2E2 1590 aa14.25□□□□□ -0.13
HDAC3-212ENST00000492407 PRDM15P57071 1507 aaPredicted RBP14.25□□□□□ -0.13
HDAC3-212ENST00000492407 DAPK1P53355 1430 aa14.24□□□□□ -0.13
HDAC3-212ENST00000492407 FGD6Q6ZV73 1430 aa14.24□□□□□ -0.13
HDAC3-212ENST00000492407 KANK1Q14678 1352 aa14.24□□□□□ -0.13
HDAC3-212ENST00000492407 ANKRD30AQ9BXX3 1397 aa14.24□□□□□ -0.13
HDAC3-212ENST00000492407 PTPN23Q9H3S7 1636 aa14.23□□□□□ -0.13
HDAC3-212ENST00000492407 ILDR2Q71H61 639 aa14.23□□□□□ -0.13
HDAC3-212ENST00000492407 ARHGAP23Q9P227 1491 aa14.22□□□□□ -0.13
HDAC3-212ENST00000492407 SLIT1O75093 1534 aa14.21□□□□□ -0.13
HDAC3-212ENST00000492407 LMTK2Q8IWU2 1503 aa14.21□□□□□ -0.13
HDAC3-212ENST00000492407 EID1Q9Y6B2 187 aa14.21□□□□□ -0.13
HDAC3-212ENST00000492407 IQGAP1P46940 1657 aa14.2□□□□□ -0.14
HDAC3-212ENST00000492407 SCAF11Q99590 1463 aaKnown RBP14.2□□□□□ -0.14
HDAC3-212ENST00000492407 TXNDC2Q86VQ3 553 aa14.2□□□□□ -0.14
HDAC3-212ENST00000492407 CROCC2H7BZ55 1655 aa14.2□□□□□ -0.14
HDAC3-212ENST00000492407 HSPA1LP34931 641 aa14.18□□□□□ -0.14
HDAC3-212ENST00000492407 GRWD1Q9BQ67 446 aaKnown RBP eCLIP14.18□□□□□ -0.14
HDAC3-212ENST00000492407 UBR1Q8IWV7 1749 aa14.18□□□□□ -0.14
HDAC3-212ENST00000492407 ADGRL2O95490 1459 aa14.18□□□□□ -0.14
HDAC3-212ENST00000492407 LRRC7Q96NW7 1537 aa14.17□□□□□ -0.14
HDAC3-212ENST00000492407 LTKP29376 864 aa14.17□□□□□ -0.14
HDAC3-212ENST00000492407 PIP4K2BP78356 416 aa14.17□□□□□ -0.14
HDAC3-212ENST00000492407 SLC52A1Q9NWF4 448 aa14.17□□□□□ -0.14
HDAC3-212ENST00000492407 TMEM2Q9UHN6 1383 aa14.17□□□□□ -0.14
HDAC3-212ENST00000492407 CEP152O94986 1710 aa14.16□□□□□ -0.14
HDAC3-212ENST00000492407 SYNMO15061 1565 aa14.16□□□□□ -0.14
HDAC3-212ENST00000492407 SCAF1Q9H7N4 1312 aaKnown RBP14.15□□□□□ -0.14
HDAC3-212ENST00000492407 KDM5AP29375 1690 aaKnown RBP14.15□□□□□ -0.14
HDAC3-212ENST00000492407 IDI1Q13907 227 aa14.15□□□□□ -0.14
HDAC3-212ENST00000492407 STAG3Q9UJ98 1225 aa14.15□□□□□ -0.14
HDAC3-212ENST00000492407 CHIC2Q9UKJ5 165 aa14.15□□□□□ -0.14
HDAC3-212ENST00000492407 NOS1P29475 1434 aa14.15□□□□□ -0.14
HDAC3-212ENST00000492407 RPRD2Q5VT52 1461 aaKnown RBP14.12□□□□□ -0.15
HDAC3-212ENST00000492407 EFCAB6Q5THR3 1501 aa14.12□□□□□ -0.15
HDAC3-212ENST00000492407 ANKRD50Q9ULJ7 1429 aa14.12□□□□□ -0.15
HDAC3-212ENST00000492407 ALKQ9UM73 1620 aa14.12□□□□□ -0.15
HDAC3-212ENST00000492407 KCNA6P17658 529 aa14.11□□□□□ -0.15
HDAC3-212ENST00000492407 HDGFP51858 240 aaKnown RBP14.11□□□□□ -0.15
HDAC3-212ENST00000492407 FAM50AQ14320 339 aaKnown RBP14.1□□□□□ -0.15
HDAC3-212ENST00000492407 PIK3C2BO00750 1634 aa14.09□□□□□ -0.15
HDAC3-212ENST00000492407 MYT1Q01538 1121 aa14.08□□□□□ -0.16
HDAC3-212ENST00000492407 STRCP1A6NGW2 1772 aa14.08□□□□□ -0.16
HDAC3-212ENST00000492407 ROCK1Q13464 1354 aa14.08□□□□□ -0.16
HDAC3-212ENST00000492407 TET3O43151 1660 aa14.07□□□□□ -0.16
HDAC3-212ENST00000492407 FAM135BQ49AJ0 1406 aa14.07□□□□□ -0.16
HDAC3-212ENST00000492407 MED1Q15648 1581 aaPredicted RBP14.06□□□□□ -0.16
HDAC3-212ENST00000492407 CFAP65Q6ZU64 1925 aaKnown RBP14.05□□□□□ -0.16
HDAC3-212ENST00000492407 ADGRB3O60242 1522 aa14.05□□□□□ -0.16
HDAC3-212ENST00000492407 ABCF1Q8NE71 845 aaKnown RBP eCLIP14.04□□□□□ -0.16
HDAC3-212ENST00000492407 PROSER2Q86WR7 435 aaPredicted RBP14.03□□□□□ -0.16
HDAC3-212ENST00000492407 TMEM94Q12767 1356 aa14.03□□□□□ -0.16
HDAC3-212ENST00000492407 PLEKHG1Q9ULL1 1385 aa14.03□□□□□ -0.16
HDAC3-212ENST00000492407 NKTRP30414 1462 aaKnown RBP14.02□□□□□ -0.16
Retrieved 100 of 20,778 RNA–protein pairs in 59.5 ms