RNA–Protein interactions for RNA: ENST00000491990.5

NUP188-209, Transcript of nucleoporin 188, humanhuman

TSL 5

Gene NUP188, Length 381 nt, Biotype processed transcript, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUP188-209ENST00000491990 ZNF142P52746 1687 aaPredicted RBP36.31■■■■□ 3.4
NUP188-209ENST00000491990 CAMSAP1Q5T5Y3 1602 aa36.3■■■■□ 3.4
NUP188-209ENST00000491990 KDM5DQ9BY66 1539 aa36.29■■■■□ 3.4
NUP188-209ENST00000491990 CEP170BQ9Y4F5 1589 aaPredicted RBP36.27■■■■□ 3.4
NUP188-209ENST00000491990 WASHC2CQ9Y4E1 1318 aa36.24■■■■□ 3.39
NUP188-209ENST00000491990 PZPP20742 1482 aa36.19■■■■□ 3.38
NUP188-209ENST00000491990 PLA2R1Q13018 1463 aa36.19■■■■□ 3.38
NUP188-209ENST00000491990 RNF17Q9BXT8 1623 aaKnown RBP36.17■■■■□ 3.38
NUP188-209ENST00000491990 EIF2AK4Q9P2K8 1649 aaKnown RBP36.16■■■■□ 3.38
NUP188-209ENST00000491990 A2ML1A8K2U0 1454 aa36.16■■■■□ 3.38
NUP188-209ENST00000491990 PTPN23Q9H3S7 1636 aa36.16■■■■□ 3.38
NUP188-209ENST00000491990 TNRQ92752 1358 aa36.15■■■■□ 3.38
NUP188-209ENST00000491990 NCKAP5LQ9HCH0 1330 aa36.14■■■■□ 3.38
NUP188-209ENST00000491990 PKD2Q13563 968 aa36.14■■■■□ 3.38
NUP188-209ENST00000491990 FBXO31Q5XUX0 539 aaPredicted RBP36.14■■■■□ 3.38
NUP188-209ENST00000491990 TCOF1Q13428 1488 aaKnown RBP36.11■■■■□ 3.37
NUP188-209ENST00000491990 SHANK2Q9UPX8 1470 aa36.11■■■■□ 3.37
NUP188-209ENST00000491990 DUOX2Q9NRD8 1548 aa36.1■■■■□ 3.37
NUP188-209ENST00000491990 DNMT1P26358 1616 aaKnown RBP36.1■■■■□ 3.37
NUP188-209ENST00000491990 CROCC2H7BZ55 1655 aa36.1■■■■□ 3.37
NUP188-209ENST00000491990 ZC3H13Q5T200 1668 aaKnown RBP36.09■■■■□ 3.37
NUP188-209ENST00000491990 FGD6Q6ZV73 1430 aa36.08■■■■□ 3.37
NUP188-209ENST00000491990 ABCC5O15440 1437 aa36.08■■■■□ 3.37
NUP188-209ENST00000491990 LTBP4Q8N2S1 1624 aa36.07■■■■□ 3.36
NUP188-209ENST00000491990 ABCC3O15438 1527 aa36.06■■■■□ 3.36
NUP188-209ENST00000491990 KIF15Q9NS87 1388 aa36.03■■■■□ 3.36
NUP188-209ENST00000491990 DAPK1P53355 1430 aa36.02■■■■□ 3.36
NUP188-209ENST00000491990 MROH1Q8NDA8 1641 aa36.01■■■■□ 3.36
NUP188-209ENST00000491990 NLRP1Q9C000 1473 aa36■■■■□ 3.35
NUP188-209ENST00000491990 RRP7BPQ9NSQ0 103 aa35.98■■■■□ 3.35
NUP188-209ENST00000491990 ERBINQ96RT1 1412 aa35.98■■■■□ 3.35
NUP188-209ENST00000491990 IQSEC2Q5JU85 1478 aa35.97■■■■□ 3.35
NUP188-209ENST00000491990 CEP152O94986 1710 aa35.95■■■■□ 3.35
NUP188-209ENST00000491990 POLR1AO95602 1720 aaPredicted RBP35.94■■■■□ 3.34
NUP188-209ENST00000491990 ZNF335Q9H4Z2 1342 aaPredicted RBP35.93■■■■□ 3.34
NUP188-209ENST00000491990 THEMISQ8N1K5 641 aaPredicted RBP35.93■■■■□ 3.34
NUP188-209ENST00000491990 SPATA31D1Q6ZQQ2 1576 aa35.93■■■■□ 3.34
NUP188-209ENST00000491990 UGGT1Q9NYU2 1555 aa35.92■■■■□ 3.34
NUP188-209ENST00000491990 PRDM15P57071 1507 aaPredicted RBP35.91■■■■□ 3.34
NUP188-209ENST00000491990 ERVK-7P63135 1459 aa35.9■■■■□ 3.34
NUP188-209ENST00000491990 ANKRD30AQ9BXX3 1397 aa35.89■■■■□ 3.34
NUP188-209ENST00000491990 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP35.88■■■■□ 3.339e-6■□□□□ 9.6
NUP188-209ENST00000491990 ANKLE2Q86XL3 938 aa35.87■■■■□ 3.33
NUP188-209ENST00000491990 CHIC2Q9UKJ5 165 aa35.87■■■■□ 3.33
NUP188-209ENST00000491990 NEURL4Q96JN8 1562 aa35.86■■■■□ 3.33
NUP188-209ENST00000491990 CFAP65Q6ZU64 1925 aaKnown RBP35.86■■■■□ 3.33
NUP188-209ENST00000491990 DEPDC5O75140 1603 aa35.84■■■■□ 3.33
NUP188-209ENST00000491990 ARHGAP31Q2M1Z3 1444 aa35.82■■■■□ 3.32
NUP188-209ENST00000491990 KANK1Q14678 1352 aa35.81■■■■□ 3.32
NUP188-209ENST00000491990 FAM50AQ14320 339 aaKnown RBP35.81■■■■□ 3.32
NUP188-209ENST00000491990 GRWD1Q9BQ67 446 aaKnown RBP eCLIP35.81■■■■□ 3.32
NUP188-209ENST00000491990 ADGRL2O95490 1459 aa35.77■■■■□ 3.32
NUP188-209ENST00000491990 MED14O60244 1454 aa35.75■■■■□ 3.31
NUP188-209ENST00000491990 NPHP4O75161 1426 aaPredicted RBP35.73■■■■□ 3.31
NUP188-209ENST00000491990 UBR1Q8IWV7 1749 aa35.71■■■■□ 3.31
NUP188-209ENST00000491990 LMTK2Q8IWU2 1503 aa35.7■■■■□ 3.31
NUP188-209ENST00000491990 VWDEQ8N2E2 1590 aa35.68■■■■□ 3.3
NUP188-209ENST00000491990 CPS1P31327 1500 aa35.68■■■■□ 3.3
NUP188-209ENST00000491990 IQGAP1P46940 1657 aa35.67■■■■□ 3.3
NUP188-209ENST00000491990 UBAP1LF5GYI3 381 aa35.66■■■■□ 3.3
NUP188-209ENST00000491990 ANKRD50Q9ULJ7 1429 aa35.62■■■■□ 3.29
NUP188-209ENST00000491990 EFCAB6Q5THR3 1501 aa35.58■■■■□ 3.29
NUP188-209ENST00000491990 SCAF11Q99590 1463 aaKnown RBP35.58■■■■□ 3.29
NUP188-209ENST00000491990 SLIT1O75093 1534 aa35.57■■■■□ 3.29
NUP188-209ENST00000491990 PIK3C2BO00750 1634 aa35.57■■■■□ 3.29
NUP188-209ENST00000491990 ARHGAP23Q9P227 1491 aa35.57■■■■□ 3.28
NUP188-209ENST00000491990 STAG3Q9UJ98 1225 aa35.54■■■■□ 3.28
NUP188-209ENST00000491990 TXNDC2Q86VQ3 553 aa35.53■■■■□ 3.28
NUP188-209ENST00000491990 EID1Q9Y6B2 187 aa35.52■■■■□ 3.28
NUP188-209ENST00000491990 KDM5AP29375 1690 aaKnown RBP35.52■■■■□ 3.28
NUP188-209ENST00000491990 LTKP29376 864 aa35.51■■■■□ 3.28
NUP188-209ENST00000491990 NOS1P29475 1434 aa35.5■■■■□ 3.27
NUP188-209ENST00000491990 SYNMO15061 1565 aa35.5■■■■□ 3.27
NUP188-209ENST00000491990 IDI1Q13907 227 aa35.49■■■■□ 3.27
NUP188-209ENST00000491990 ROCK1Q13464 1354 aa35.49■■■■□ 3.27
NUP188-209ENST00000491990 TMEM2Q9UHN6 1383 aa35.48■■■■□ 3.27
NUP188-209ENST00000491990 TOM1O60784 492 aa35.47■■■■□ 3.27
NUP188-209ENST00000491990 RPRD2Q5VT52 1461 aaKnown RBP35.47■■■■□ 3.27
NUP188-209ENST00000491990 TET3O43151 1660 aa35.44■■■■□ 3.26
NUP188-209ENST00000491990 SLC52A1Q9NWF4 448 aa35.44■■■■□ 3.26
NUP188-209ENST00000491990 STRCP1A6NGW2 1772 aa35.43■■■■□ 3.26
NUP188-209ENST00000491990 UNC13BO14795 1591 aa35.43■■■■□ 3.26
NUP188-209ENST00000491990 PPARGC1BQ86YN6 1023 aaKnown RBP35.43■■■■□ 3.26
NUP188-209ENST00000491990 DISP3Q9P2K9 1392 aa35.41■■■■□ 3.26
NUP188-209ENST00000491990 ADGRB3O60242 1522 aa35.39■■■■□ 3.26
NUP188-209ENST00000491990 GCC2Q8IWJ2 1684 aa35.39■■■■□ 3.26
NUP188-209ENST00000491990 SCAF1Q9H7N4 1312 aaKnown RBP35.38■■■■□ 3.25
NUP188-209ENST00000491990 LRRC7Q96NW7 1537 aa35.37■■■■□ 3.25
NUP188-209ENST00000491990 ITGAEP38570 1179 aa35.37■■■■□ 3.25
NUP188-209ENST00000491990 PIP4K2BP78356 416 aa35.37■■■■□ 3.25
NUP188-209ENST00000491990 IQGAP3Q86VI3 1631 aa35.3■■■■□ 3.24
NUP188-209ENST00000491990 E9PCH4 1651 aa35.27■■■■□ 3.24
NUP188-209ENST00000491990 ALKQ9UM73 1620 aa35.26■■■■□ 3.24
NUP188-209ENST00000491990 NUP155O75694 1391 aa35.25■■■■□ 3.23
NUP188-209ENST00000491990 HSPA1LP34931 641 aa35.24■■■■□ 3.23
NUP188-209ENST00000491990 MYO5BQ9ULV0 1848 aa35.23■■■■□ 3.23
NUP188-209ENST00000491990 TMEM131LA2VDJ0 1609 aa35.21■■■■□ 3.23
NUP188-209ENST00000491990 SLC26A8Q96RN1 970 aa35.2■■■■□ 3.23
NUP188-209ENST00000491990 HDGFP51858 240 aaKnown RBP35.19■■■■□ 3.22
NUP188-209ENST00000491990 RRBP1Q9P2E9 1410 aaKnown RBP35.19■■■■□ 3.22
Retrieved 100 of 20,778 RNA–protein pairs in 31.9 ms