RNA–Protein interactions for RNA: ENST00000491974.1

SNHG28-202, Transcript of small nucleolar RNA host gene 28, humanhuman

TSL 2

Gene SNHG28, Length 1,064 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNHG28-202ENST00000491974 WASHC2CQ9Y4E1 1318 aa24.71■■□□□ 1.55
SNHG28-202ENST00000491974 KDM4FA0A1W2PPD8 638 aa24.71■■□□□ 1.55
SNHG28-202ENST00000491974 BCORL1Q5H9F3 1711 aa24.71■■□□□ 1.55
SNHG28-202ENST00000491974 KANK1Q14678 1352 aa24.7■■□□□ 1.55
SNHG28-202ENST00000491974 ACIN1Q9UKV3 1341 aaKnown RBP24.68■■□□□ 1.54
SNHG28-202ENST00000491974 GCC2Q8IWJ2 1684 aa24.67■■□□□ 1.54
SNHG28-202ENST00000491974 HRCP23327 699 aa24.67■■□□□ 1.54
SNHG28-202ENST00000491974 TRIM52Q96A61 297 aa24.67■■□□□ 1.54
SNHG28-202ENST00000491974 PCGF6Q9BYE7 350 aa24.67■■□□□ 1.54
SNHG28-202ENST00000491974 NUP155O75694 1391 aa24.67■■□□□ 1.54
SNHG28-202ENST00000491974 RAB3GAP2Q9H2M9 1393 aa24.67■■□□□ 1.54
SNHG28-202ENST00000491974 RNF17Q9BXT8 1623 aaKnown RBP24.66■■□□□ 1.54
SNHG28-202ENST00000491974 CNTLNQ9NXG0 1405 aa24.65■■□□□ 1.54
SNHG28-202ENST00000491974 ADAMTSL3P82987 1691 aa24.63■■□□□ 1.53
SNHG28-202ENST00000491974 PRDM15P57071 1507 aaPredicted RBP24.62■■□□□ 1.53
SNHG28-202ENST00000491974 MROH1Q8NDA8 1641 aa24.62■■□□□ 1.53
SNHG28-202ENST00000491974 DEPDC5O75140 1603 aa24.61■■□□□ 1.53
SNHG28-202ENST00000491974 FAM135AQ9P2D6 1515 aa24.61■■□□□ 1.53
SNHG28-202ENST00000491974 ZMYM3Q14202 1370 aa24.6■■□□□ 1.53
SNHG28-202ENST00000491974 KDM5DQ9BY66 1539 aa24.6■■□□□ 1.53
SNHG28-202ENST00000491974 MADDQ8WXG6 1647 aa24.58■■□□□ 1.53
SNHG28-202ENST00000491974 ABCC3O15438 1527 aa24.58■■□□□ 1.53
SNHG28-202ENST00000491974 UNC13BO14795 1591 aa24.58■■□□□ 1.52
SNHG28-202ENST00000491974 VWDEQ8N2E2 1590 aa24.57■■□□□ 1.52
SNHG28-202ENST00000491974 CEBPAP49715 358 aaPredicted RBP24.55■■□□□ 1.52
SNHG28-202ENST00000491974 LMTK2Q8IWU2 1503 aa24.55■■□□□ 1.52
SNHG28-202ENST00000491974 PTPRMP28827 1452 aa24.54■■□□□ 1.52
SNHG28-202ENST00000491974 PLPPR3Q6T4P5 718 aa24.53■■□□□ 1.52
SNHG28-202ENST00000491974 SLC4A1APQ9BWU0 796 aaKnown RBP24.53■■□□□ 1.52
SNHG28-202ENST00000491974 FER1L4A9Z1Z3 1794 aa24.52■■□□□ 1.52
SNHG28-202ENST00000491974 MPHOSPH9Q99550 1183 aa24.51■■□□□ 1.51
SNHG28-202ENST00000491974 ARHGAP31Q2M1Z3 1444 aa24.51■■□□□ 1.51
SNHG28-202ENST00000491974 CLTCQ00610 1675 aaKnown RBP24.5■■□□□ 1.51
SNHG28-202ENST00000491974 RIMS1Q86UR5 1692 aaKnown RBP24.5■■□□□ 1.51
SNHG28-202ENST00000491974 PZPP20742 1482 aa24.49■■□□□ 1.51
SNHG28-202ENST00000491974 ZC3H13Q5T200 1668 aaKnown RBP24.49■■□□□ 1.51
SNHG28-202ENST00000491974 FBXO31Q5XUX0 539 aaPredicted RBP24.48■■□□□ 1.51
SNHG28-202ENST00000491974 IQGAP3Q86VI3 1631 aa24.48■■□□□ 1.51
SNHG28-202ENST00000491974 PKD2Q13563 968 aa24.47■■□□□ 1.51
SNHG28-202ENST00000491974 NPATQ14207 1427 aa24.46■■□□□ 1.51
SNHG28-202ENST00000491974 MROH2AA6NES4 1674 aa24.45■■□□□ 1.5
SNHG28-202ENST00000491974 CEP152O94986 1710 aa24.44■■□□□ 1.5
SNHG28-202ENST00000491974 EFCAB6Q5THR3 1501 aa24.43■■□□□ 1.5
SNHG28-202ENST00000491974 RPRD2Q5VT52 1461 aaKnown RBP24.42■■□□□ 1.5
SNHG28-202ENST00000491974 CAMSAP1Q5T5Y3 1602 aa24.42■■□□□ 1.5
SNHG28-202ENST00000491974 TET3O43151 1660 aa24.41■■□□□ 1.5
SNHG28-202ENST00000491974 C3P01024 1663 aa24.38■■□□□ 1.49
SNHG28-202ENST00000491974 TNRQ92752 1358 aa24.38■■□□□ 1.49
SNHG28-202ENST00000491974 ERVK-7P63135 1459 aa24.38■■□□□ 1.49
SNHG28-202ENST00000491974 FOXD1Q16676 465 aa24.37■■□□□ 1.49
SNHG28-202ENST00000491974 NOS1P29475 1434 aa24.35■■□□□ 1.49
SNHG28-202ENST00000491974 PTPRTO14522 1441 aa24.33■■□□□ 1.49
SNHG28-202ENST00000491974 SPATA31D1Q6ZQQ2 1576 aa24.33■■□□□ 1.48
SNHG28-202ENST00000491974 SLC52A1Q9NWF4 448 aa24.32■■□□□ 1.48
SNHG28-202ENST00000491974 E9PCH4 1651 aa24.31■■□□□ 1.48
SNHG28-202ENST00000491974 IDI1Q13907 227 aa24.29■■□□□ 1.48
SNHG28-202ENST00000491974 DHX57Q6P158 1386 aaKnown RBP24.29■■□□□ 1.48
SNHG28-202ENST00000491974 PLA2R1Q13018 1463 aa24.28■■□□□ 1.48
SNHG28-202ENST00000491974 PREX1Q8TCU6 1659 aa24.27■■□□□ 1.48
SNHG28-202ENST00000491974 UHRF1BP1Q6BDS2 1440 aa24.26■■□□□ 1.47
SNHG28-202ENST00000491974 NLRP1Q9C000 1473 aa24.26■■□□□ 1.47
SNHG28-202ENST00000491974 ANKRD30BQ9BXX2 1392 aa24.24■■□□□ 1.47
SNHG28-202ENST00000491974 SYNMO15061 1565 aa24.23■■□□□ 1.47
SNHG28-202ENST00000491974 STAG3Q9UJ98 1225 aa24.22■■□□□ 1.47
SNHG28-202ENST00000491974 SETD1BQ9UPS6 1966 aaKnown RBP24.22■■□□□ 1.47
SNHG28-202ENST00000491974 TRPM2O94759 1503 aa24.2■■□□□ 1.47
SNHG28-202ENST00000491974 CFAP65Q6ZU64 1925 aaKnown RBP24.2■■□□□ 1.46
SNHG28-202ENST00000491974 A2ML1A8K2U0 1454 aa24.19■■□□□ 1.46
SNHG28-202ENST00000491974 CCDC144AA2RUR9 1427 aa24.19■■□□□ 1.46
SNHG28-202ENST00000491974 CHGAP10645 457 aaKnown RBP24.19■■□□□ 1.46
SNHG28-202ENST00000491974 THEMISQ8N1K5 641 aaPredicted RBP24.19■■□□□ 1.46
SNHG28-202ENST00000491974 UGGT1Q9NYU2 1555 aa24.16■■□□□ 1.46
SNHG28-202ENST00000491974 SPHKAPQ2M3C7 1700 aa24.15■■□□□ 1.46
SNHG28-202ENST00000491974 MYO3AQ8NEV4 1616 aa24.15■■□□□ 1.46
SNHG28-202ENST00000491974 LMTK3Q96Q04 1460 aa24.13■■□□□ 1.45
SNHG28-202ENST00000491974 CEP170BQ9Y4F5 1589 aaPredicted RBP24.13■■□□□ 1.45
SNHG28-202ENST00000491974 HSPA2P54652 639 aa24.12■■□□□ 1.45
SNHG28-202ENST00000491974 PIK3C2BO00750 1634 aa24.12■■□□□ 1.45
SNHG28-202ENST00000491974 CCER1Q8TC90 406 aaPredicted RBP24.11■■□□□ 1.45
SNHG28-202ENST00000491974 CLTCL1P53675 1640 aa24.1■■□□□ 1.45
SNHG28-202ENST00000491974 ZNF326Q5BKZ1 582 aaKnown RBP24.08■■□□□ 1.45
SNHG28-202ENST00000491974 SIN3AQ96ST3 1273 aa24.08■■□□□ 1.45
SNHG28-202ENST00000491974 ADGRB3O60242 1522 aa24.08■■□□□ 1.45
SNHG28-202ENST00000491974 CLSPNQ9HAW4 1339 aa24.07■■□□□ 1.44
SNHG28-202ENST00000491974 TMEM2Q9UHN6 1383 aa24.06■■□□□ 1.44
SNHG28-202ENST00000491974 ZNF142P52746 1687 aaPredicted RBP24.06■■□□□ 1.44
SNHG28-202ENST00000491974 HDGFP51858 240 aaKnown RBP24.06■■□□□ 1.44
SNHG28-202ENST00000491974 RGL3Q3MIN7 710 aa24.06■■□□□ 1.44
SNHG28-202ENST00000491974 NEUROD1Q13562 356 aa24.05■■□□□ 1.44
SNHG28-202ENST00000491974 SPATA31E1Q6ZUB1 1445 aa24.04■■□□□ 1.44
SNHG28-202ENST00000491974 ANKLE2Q86XL3 938 aa24.04■■□□□ 1.44
SNHG28-202ENST00000491974 EID1Q9Y6B2 187 aa24.04■■□□□ 1.44
SNHG28-202ENST00000491974 TMEM131LA2VDJ0 1609 aa24.03■■□□□ 1.44
SNHG28-202ENST00000491974 RPGRIP1LQ68CZ1 1315 aa24.03■■□□□ 1.44
SNHG28-202ENST00000491974 TXNDC2Q86VQ3 553 aa24.02■■□□□ 1.44
SNHG28-202ENST00000491974 ABCF1Q8NE71 845 aaKnown RBP eCLIP24.02■■□□□ 1.44
SNHG28-202ENST00000491974 UBR1Q8IWV7 1749 aa24.01■■□□□ 1.43
SNHG28-202ENST00000491974 KDM5AP29375 1690 aaKnown RBP24.01■■□□□ 1.43
SNHG28-202ENST00000491974 RIMS2Q9UQ26 1411 aa24■■□□□ 1.43
SNHG28-202ENST00000491974 ARHGAP23Q9P227 1491 aa24■■□□□ 1.43
Retrieved 100 of 20,778 RNA–protein pairs in 36.7 ms