RNA–Protein interactions for RNA: ENST00000491674.1

FXR1-221, Transcript of FMR1 autosomal homolog 1, humanhuman

TSL 2 BASIC

Gene FXR1, Length 365 nt, Biotype protein coding, Subcellular localisation Cytosol, Exosome, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FXR1-221ENST00000491674 GCC2Q8IWJ2 1684 aa23.79■■□□□ 1.4
FXR1-221ENST00000491674 HRCP23327 699 aa23.79■■□□□ 1.4
FXR1-221ENST00000491674 ESF1Q9H501 851 aaKnown RBP23.79■■□□□ 1.4
FXR1-221ENST00000491674 KANK1Q14678 1352 aa23.78■■□□□ 1.4
FXR1-221ENST00000491674 RAB3GAP2Q9H2M9 1393 aa23.78■■□□□ 1.4
FXR1-221ENST00000491674 TRIM52Q96A61 297 aa23.78■■□□□ 1.4
FXR1-221ENST00000491674 WASHC2CQ9Y4E1 1318 aa23.74■■□□□ 1.39
FXR1-221ENST00000491674 NUP155O75694 1391 aa23.74■■□□□ 1.39
FXR1-221ENST00000491674 BCORL1Q5H9F3 1711 aa23.73■■□□□ 1.39
FXR1-221ENST00000491674 SIGLEC1Q9BZZ2 1709 aa23.72■■□□□ 1.39
FXR1-221ENST00000491674 RNF17Q9BXT8 1623 aaKnown RBP23.7■■□□□ 1.39
FXR1-221ENST00000491674 PRDM15P57071 1507 aaPredicted RBP23.67■■□□□ 1.38
FXR1-221ENST00000491674 CNTLNQ9NXG0 1405 aa23.67■■□□□ 1.38
FXR1-221ENST00000491674 FAM135AQ9P2D6 1515 aa23.66■■□□□ 1.38
FXR1-221ENST00000491674 DEPDC5O75140 1603 aa23.66■■□□□ 1.38
FXR1-221ENST00000491674 UNC13BO14795 1591 aa23.65■■□□□ 1.38
FXR1-221ENST00000491674 MROH1Q8NDA8 1641 aa23.64■■□□□ 1.38
FXR1-221ENST00000491674 KDM5DQ9BY66 1539 aa23.64■■□□□ 1.37
FXR1-221ENST00000491674 SLC4A1APQ9BWU0 796 aaKnown RBP23.63■■□□□ 1.37
FXR1-221ENST00000491674 VWDEQ8N2E2 1590 aa23.61■■□□□ 1.37
FXR1-221ENST00000491674 ABCC3O15438 1527 aa23.6■■□□□ 1.37
FXR1-221ENST00000491674 MPHOSPH9Q99550 1183 aa23.6■■□□□ 1.37
FXR1-221ENST00000491674 LMTK2Q8IWU2 1503 aa23.59■■□□□ 1.37
FXR1-221ENST00000491674 ZMYM3Q14202 1370 aa23.58■■□□□ 1.37
FXR1-221ENST00000491674 ADAMTSL3P82987 1691 aa23.57■■□□□ 1.36
FXR1-221ENST00000491674 IQGAP3Q86VI3 1631 aa23.56■■□□□ 1.36
FXR1-221ENST00000491674 KDM4FA0A1W2PPD8 638 aa23.56■■□□□ 1.36
FXR1-221ENST00000491674 PKD2Q13563 968 aa23.56■■□□□ 1.36
FXR1-221ENST00000491674 PZPP20742 1482 aa23.56■■□□□ 1.36
FXR1-221ENST00000491674 ZC3H13Q5T200 1668 aaKnown RBP23.55■■□□□ 1.36
FXR1-221ENST00000491674 MADDQ8WXG6 1647 aa23.54■■□□□ 1.36
FXR1-221ENST00000491674 ARHGAP31Q2M1Z3 1444 aa23.53■■□□□ 1.36
FXR1-221ENST00000491674 FER1L4A9Z1Z3 1794 aa23.52■■□□□ 1.36
FXR1-221ENST00000491674 CLTCQ00610 1675 aaKnown RBP23.51■■□□□ 1.35
FXR1-221ENST00000491674 PLPPR3Q6T4P5 718 aa23.51■■□□□ 1.35
FXR1-221ENST00000491674 CEBPAP49715 358 aaPredicted RBP23.5■■□□□ 1.35
FXR1-221ENST00000491674 EFCAB6Q5THR3 1501 aa23.49■■□□□ 1.35
FXR1-221ENST00000491674 TET3O43151 1660 aa23.49■■□□□ 1.35
FXR1-221ENST00000491674 CEP152O94986 1710 aa23.49■■□□□ 1.35
FXR1-221ENST00000491674 NPATQ14207 1427 aa23.49■■□□□ 1.35
FXR1-221ENST00000491674 RPRD2Q5VT52 1461 aaKnown RBP23.49■■□□□ 1.35
FXR1-221ENST00000491674 PTPRMP28827 1452 aa23.48■■□□□ 1.35
FXR1-221ENST00000491674 MROH2AA6NES4 1674 aa23.48■■□□□ 1.35
FXR1-221ENST00000491674 RIMS1Q86UR5 1692 aaKnown RBP23.48■■□□□ 1.35
FXR1-221ENST00000491674 CAMSAP1Q5T5Y3 1602 aa23.47■■□□□ 1.35
FXR1-221ENST00000491674 FBXO31Q5XUX0 539 aaPredicted RBP23.46■■□□□ 1.35
FXR1-221ENST00000491674 FOXD1Q16676 465 aa23.44■■□□□ 1.34
FXR1-221ENST00000491674 DHX57Q6P158 1386 aaKnown RBP23.43■■□□□ 1.34
FXR1-221ENST00000491674 ERVK-7P63135 1459 aa23.41■■□□□ 1.34
FXR1-221ENST00000491674 TNRQ92752 1358 aa23.4■■□□□ 1.34
FXR1-221ENST00000491674 NOS1P29475 1434 aa23.39■■□□□ 1.33
FXR1-221ENST00000491674 E9PCH4 1651 aa23.38■■□□□ 1.33
FXR1-221ENST00000491674 PTPRTO14522 1441 aa23.38■■□□□ 1.33
FXR1-221ENST00000491674 C3P01024 1663 aa23.38■■□□□ 1.33
FXR1-221ENST00000491674 SLC52A1Q9NWF4 448 aa23.37■■□□□ 1.33
FXR1-221ENST00000491674 SPATA31D1Q6ZQQ2 1576 aa23.35■■□□□ 1.33
FXR1-221ENST00000491674 CCER1Q8TC90 406 aaPredicted RBP23.35■■□□□ 1.33
FXR1-221ENST00000491674 ANKRD30BQ9BXX2 1392 aa23.34■■□□□ 1.33
FXR1-221ENST00000491674 PLA2R1Q13018 1463 aa23.32■■□□□ 1.32
FXR1-221ENST00000491674 PREX1Q8TCU6 1659 aa23.32■■□□□ 1.32
FXR1-221ENST00000491674 CCDC144AA2RUR9 1427 aa23.31■■□□□ 1.32
FXR1-221ENST00000491674 IDI1Q13907 227 aa23.3■■□□□ 1.32
FXR1-221ENST00000491674 TRPM2O94759 1503 aa23.29■■□□□ 1.32
FXR1-221ENST00000491674 STAG3Q9UJ98 1225 aa23.29■■□□□ 1.32
FXR1-221ENST00000491674 NLRP1Q9C000 1473 aa23.29■■□□□ 1.32
FXR1-221ENST00000491674 CLSPNQ9HAW4 1339 aa23.29■■□□□ 1.32
FXR1-221ENST00000491674 CHGAP10645 457 aaKnown RBP23.27■■□□□ 1.32
FXR1-221ENST00000491674 SYNMO15061 1565 aa23.27■■□□□ 1.32
FXR1-221ENST00000491674 UHRF1BP1Q6BDS2 1440 aa23.26■■□□□ 1.31
FXR1-221ENST00000491674 SPHKAPQ2M3C7 1700 aa23.26■■□□□ 1.31
FXR1-221ENST00000491674 CFAP65Q6ZU64 1925 aaKnown RBP23.25■■□□□ 1.31
FXR1-221ENST00000491674 SETD1BQ9UPS6 1966 aaKnown RBP23.22■■□□□ 1.31
FXR1-221ENST00000491674 A2ML1A8K2U0 1454 aa23.22■■□□□ 1.31
FXR1-221ENST00000491674 NEUROD1Q13562 356 aa23.21■■□□□ 1.31
FXR1-221ENST00000491674 THEMISQ8N1K5 641 aaPredicted RBP23.21■■□□□ 1.31
FXR1-221ENST00000491674 UGGT1Q9NYU2 1555 aa23.21■■□□□ 1.31
FXR1-221ENST00000491674 SIN3AQ96ST3 1273 aa23.2■■□□□ 1.3
FXR1-221ENST00000491674 ZNF326Q5BKZ1 582 aaKnown RBP23.18■■□□□ 1.3
FXR1-221ENST00000491674 PIK3C2BO00750 1634 aa23.18■■□□□ 1.3
FXR1-221ENST00000491674 CLTCL1P53675 1640 aa23.18■■□□□ 1.3
FXR1-221ENST00000491674 MYO3AQ8NEV4 1616 aa23.17■■□□□ 1.3
FXR1-221ENST00000491674 CEP170BQ9Y4F5 1589 aaPredicted RBP23.15■■□□□ 1.3
FXR1-221ENST00000491674 RGL3Q3MIN7 710 aa23.15■■□□□ 1.3
FXR1-221ENST00000491674 ADGRB3O60242 1522 aa23.14■■□□□ 1.3
FXR1-221ENST00000491674 HDGFP51858 240 aaKnown RBP23.14■■□□□ 1.29
FXR1-221ENST00000491674 RPGRIP1LQ68CZ1 1315 aa23.12■■□□□ 1.29
FXR1-221ENST00000491674 SPATA31E1Q6ZUB1 1445 aa23.11■■□□□ 1.29
FXR1-221ENST00000491674 ABCF1Q8NE71 845 aaKnown RBP eCLIP23.1■■□□□ 1.29
FXR1-221ENST00000491674 EID1Q9Y6B2 187 aa23.1■■□□□ 1.29
FXR1-221ENST00000491674 TMEM2Q9UHN6 1383 aa23.09■■□□□ 1.29
FXR1-221ENST00000491674 ZNF142P52746 1687 aaPredicted RBP23.09■■□□□ 1.29
FXR1-221ENST00000491674 TMEM131LA2VDJ0 1609 aa23.08■■□□□ 1.29
FXR1-221ENST00000491674 KDM5AP29375 1690 aaKnown RBP23.07■■□□□ 1.28
FXR1-221ENST00000491674 NEURL4Q96JN8 1562 aa23.07■■□□□ 1.28
FXR1-221ENST00000491674 LMTK3Q96Q04 1460 aa23.07■■□□□ 1.28
FXR1-221ENST00000491674 TONSLQ96HA7 1378 aa23.07■■□□□ 1.28
FXR1-221ENST00000491674 ANKLE2Q86XL3 938 aa23.07■■□□□ 1.28
FXR1-221ENST00000491674 KIF1BO60333 1816 aa23.06■■□□□ 1.28
FXR1-221ENST00000491674 HSPA2P54652 639 aa23.06■■□□□ 1.28
FXR1-221ENST00000491674 STAC3Q96MF2 364 aa23.06■■□□□ 1.28
Retrieved 100 of 20,778 RNA–protein pairs in 9.5 ms