RNA–Protein interactions for RNA: ENST00000491651.1

SMARCD3-214, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily d, member 3, humanhuman

TSL 4

Gene SMARCD3, Length 613 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCD3-214ENST00000491651 DUOX2Q9NRD8 1548 aa27.18■■□□□ 1.94
SMARCD3-214ENST00000491651 KIF3BO15066 747 aa27.18■■□□□ 1.94
SMARCD3-214ENST00000491651 ZC3H13Q5T200 1668 aaKnown RBP27.16■■□□□ 1.94
SMARCD3-214ENST00000491651 HSPA2P54652 639 aa27.14■■□□□ 1.94
SMARCD3-214ENST00000491651 MYO3AQ8NEV4 1616 aa27.12■■□□□ 1.93
SMARCD3-214ENST00000491651 ZNF142P52746 1687 aaPredicted RBP27.12■■□□□ 1.93
SMARCD3-214ENST00000491651 KIF15Q9NS87 1388 aa27.09■■□□□ 1.93
SMARCD3-214ENST00000491651 PTPRKQ15262 1439 aa27.09■■□□□ 1.93
SMARCD3-214ENST00000491651 ERBINQ96RT1 1412 aa27.08■■□□□ 1.93
SMARCD3-214ENST00000491651 MROH1Q8NDA8 1641 aa27.08■■□□□ 1.93
SMARCD3-214ENST00000491651 CEP152O94986 1710 aa27.07■■□□□ 1.92
SMARCD3-214ENST00000491651 STRCQ7RTU9 1775 aa27.07■■□□□ 1.92
SMARCD3-214ENST00000491651 PZPP20742 1482 aa27.06■■□□□ 1.92
SMARCD3-214ENST00000491651 ANKRD30AQ9BXX3 1397 aa27.05■■□□□ 1.92
SMARCD3-214ENST00000491651 WASHC2CQ9Y4E1 1318 aa27.04■■□□□ 1.92
SMARCD3-214ENST00000491651 ADGRL2O95490 1459 aa27.04■■□□□ 1.92
SMARCD3-214ENST00000491651 ABCC3O15438 1527 aa27.03■■□□□ 1.92
SMARCD3-214ENST00000491651 DEPDC5O75140 1603 aa27.03■■□□□ 1.92
SMARCD3-214ENST00000491651 PRDM15P57071 1507 aaPredicted RBP27.03■■□□□ 1.92
SMARCD3-214ENST00000491651 FAM50AQ14320 339 aaKnown RBP27.03■■□□□ 1.92
SMARCD3-214ENST00000491651 CEP170BQ9Y4F5 1589 aaPredicted RBP27.02■■□□□ 1.92
SMARCD3-214ENST00000491651 CAMSAP1Q5T5Y3 1602 aa27.01■■□□□ 1.91
SMARCD3-214ENST00000491651 RRP7BPQ9NSQ0 103 aa27■■□□□ 1.91
SMARCD3-214ENST00000491651 NCOA1Q15788 1441 aa26.99■■□□□ 1.91
SMARCD3-214ENST00000491651 CFAP65Q6ZU64 1925 aaKnown RBP26.98■■□□□ 1.91
SMARCD3-214ENST00000491651 CHIC2Q9UKJ5 165 aa26.96■■□□□ 1.91
SMARCD3-214ENST00000491651 A2ML1A8K2U0 1454 aa26.93■■□□□ 1.9
SMARCD3-214ENST00000491651 TNRQ92752 1358 aa26.93■■□□□ 1.9
SMARCD3-214ENST00000491651 DMRT2Q9Y5R5 561 aa26.92■■□□□ 1.9
SMARCD3-214ENST00000491651 ILDR1Q86SU0 546 aaPredicted RBP26.91■■□□□ 1.9
SMARCD3-214ENST00000491651 SPATA31D1Q6ZQQ2 1576 aa26.91■■□□□ 1.9
SMARCD3-214ENST00000491651 PLA2R1Q13018 1463 aa26.9■■□□□ 1.9
SMARCD3-214ENST00000491651 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP26.9■■□□□ 1.9
SMARCD3-214ENST00000491651 PPARGC1BQ86YN6 1023 aaKnown RBP26.89■■□□□ 1.9
SMARCD3-214ENST00000491651 KANK1Q14678 1352 aa26.88■■□□□ 1.89
SMARCD3-214ENST00000491651 NLRP1Q9C000 1473 aa26.87■■□□□ 1.89
SMARCD3-214ENST00000491651 FBXO31Q5XUX0 539 aaPredicted RBP26.87■■□□□ 1.89
SMARCD3-214ENST00000491651 PTPRTO14522 1441 aa26.87■■□□□ 1.89
SMARCD3-214ENST00000491651 POLR1AO95602 1720 aaPredicted RBP26.87■■□□□ 1.89
SMARCD3-214ENST00000491651 ERVK-7P63135 1459 aa26.87■■□□□ 1.89
SMARCD3-214ENST00000491651 VWDEQ8N2E2 1590 aa26.86■■□□□ 1.89
SMARCD3-214ENST00000491651 ANKRD50Q9ULJ7 1429 aa26.85■■□□□ 1.89
SMARCD3-214ENST00000491651 ARHGAP31Q2M1Z3 1444 aa26.84■■□□□ 1.89
SMARCD3-214ENST00000491651 LMTK2Q8IWU2 1503 aa26.84■■□□□ 1.89
SMARCD3-214ENST00000491651 ROCK1Q13464 1354 aa26.84■■□□□ 1.89
SMARCD3-214ENST00000491651 UNC13BO14795 1591 aa26.8■■□□□ 1.88
SMARCD3-214ENST00000491651 UGGT1Q9NYU2 1555 aa26.8■■□□□ 1.88
SMARCD3-214ENST00000491651 GRWD1Q9BQ67 446 aaKnown RBP eCLIP26.8■■□□□ 1.88
SMARCD3-214ENST00000491651 RRBP1Q9P2E9 1410 aaKnown RBP26.8■■□□□ 1.88
SMARCD3-214ENST00000491651 EFCAB6Q5THR3 1501 aa26.78■■□□□ 1.88
SMARCD3-214ENST00000491651 PKD2Q13563 968 aa26.77■■□□□ 1.88
SMARCD3-214ENST00000491651 GCC2Q8IWJ2 1684 aa26.76■■□□□ 1.87
SMARCD3-214ENST00000491651 TET3O43151 1660 aa26.76■■□□□ 1.87
SMARCD3-214ENST00000491651 UBR1Q8IWV7 1749 aa26.75■■□□□ 1.87
SMARCD3-214ENST00000491651 NCKAP5LQ9HCH0 1330 aa26.71■■□□□ 1.87
SMARCD3-214ENST00000491651 ITGAEP38570 1179 aa26.71■■□□□ 1.87
SMARCD3-214ENST00000491651 NEURL4Q96JN8 1562 aa26.7■■□□□ 1.86
SMARCD3-214ENST00000491651 KDM5AP29375 1690 aaKnown RBP26.7■■□□□ 1.86
SMARCD3-214ENST00000491651 IQGAP3Q86VI3 1631 aa26.69■■□□□ 1.86
SMARCD3-214ENST00000491651 THEMISQ8N1K5 641 aaPredicted RBP26.69■■□□□ 1.86
SMARCD3-214ENST00000491651 RPRD2Q5VT52 1461 aaKnown RBP26.68■■□□□ 1.86
SMARCD3-214ENST00000491651 PIK3C2BO00750 1634 aa26.68■■□□□ 1.86
SMARCD3-214ENST00000491651 FBXO41Q8TF61 875 aa26.66■■□□□ 1.86
SMARCD3-214ENST00000491651 CERKQ8TCT0 537 aa26.65■■□□□ 1.86
SMARCD3-214ENST00000491651 SYNMO15061 1565 aa26.65■■□□□ 1.86
SMARCD3-214ENST00000491651 LTBP4Q8N2S1 1624 aa26.64■■□□□ 1.85
SMARCD3-214ENST00000491651 IQGAP1P46940 1657 aa26.63■■□□□ 1.85
SMARCD3-214ENST00000491651 E9PCH4 1651 aa26.63■■□□□ 1.85
SMARCD3-214ENST00000491651 ANKLE2Q86XL3 938 aa26.62■■□□□ 1.85
SMARCD3-214ENST00000491651 NOS1P29475 1434 aa26.62■■□□□ 1.85
SMARCD3-214ENST00000491651 MED14O60244 1454 aa26.6■■□□□ 1.85
SMARCD3-214ENST00000491651 SLIT1O75093 1534 aa26.58■■□□□ 1.85
SMARCD3-214ENST00000491651 IQSEC2Q5JU85 1478 aa26.56■■□□□ 1.84
SMARCD3-214ENST00000491651 ADGRB3O60242 1522 aa26.56■■□□□ 1.84
SMARCD3-214ENST00000491651 NPHP4O75161 1426 aaPredicted RBP26.56■■□□□ 1.84
SMARCD3-214ENST00000491651 ARHGAP23Q9P227 1491 aa26.55■■□□□ 1.84
SMARCD3-214ENST00000491651 MYO5BQ9ULV0 1848 aa26.55■■□□□ 1.84
SMARCD3-214ENST00000491651 SCAF11Q99590 1463 aaKnown RBP26.54■■□□□ 1.84
SMARCD3-214ENST00000491651 NUP155O75694 1391 aa26.53■■□□□ 1.84
SMARCD3-214ENST00000491651 NAIPQ13075 1403 aa26.52■■□□□ 1.84
SMARCD3-214ENST00000491651 ZNF335Q9H4Z2 1342 aaPredicted RBP26.52■■□□□ 1.84
SMARCD3-214ENST00000491651 STAG3Q9UJ98 1225 aa26.52■■□□□ 1.84
SMARCD3-214ENST00000491651 SLC52A1Q9NWF4 448 aa26.51■■□□□ 1.83
SMARCD3-214ENST00000491651 SPHKAPQ2M3C7 1700 aa26.5■■□□□ 1.83
SMARCD3-214ENST00000491651 HFM1A2PYH4 1435 aa26.49■■□□□ 1.83
SMARCD3-214ENST00000491651 IDI1Q13907 227 aa26.49■■□□□ 1.83
SMARCD3-214ENST00000491651 CPS1P31327 1500 aa26.47■■□□□ 1.83
SMARCD3-214ENST00000491651 TMEM2Q9UHN6 1383 aa26.46■■□□□ 1.83
SMARCD3-214ENST00000491651 EID1Q9Y6B2 187 aa26.45■■□□□ 1.82
SMARCD3-214ENST00000491651 TMEM131LA2VDJ0 1609 aa26.45■■□□□ 1.82
SMARCD3-214ENST00000491651 TXNDC2Q86VQ3 553 aa26.42■■□□□ 1.82
SMARCD3-214ENST00000491651 LTKP29376 864 aa26.4■■□□□ 1.82
SMARCD3-214ENST00000491651 STRCP1A6NGW2 1772 aa26.4■■□□□ 1.82
SMARCD3-214ENST00000491651 KIF1BO60333 1816 aa26.33■■□□□ 1.81
SMARCD3-214ENST00000491651 ZFYVE9O95405 1425 aa26.32■■□□□ 1.8
SMARCD3-214ENST00000491651 TRPM2O94759 1503 aa26.31■■□□□ 1.8
SMARCD3-214ENST00000491651 RIMS2Q9UQ26 1411 aa26.31■■□□□ 1.8
SMARCD3-214ENST00000491651 HDGFP51858 240 aaKnown RBP26.29■■□□□ 1.8
SMARCD3-214ENST00000491651 TRIM52Q96A61 297 aa26.29■■□□□ 1.8
SMARCD3-214ENST00000491651 CLTCL1P53675 1640 aa26.28■■□□□ 1.8
Retrieved 100 of 20,778 RNA–protein pairs in 33.5 ms