RNA–Protein interactions for RNA: ENST00000491584.1

PTPN7-214, Transcript of protein tyrosine phosphatase, non-receptor type 7, humanhuman

TSL 2

Gene PTPN7, Length 573 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN7-214ENST00000491584 PLA2R1Q13018 1463 aa18.13■□□□□ 0.49
PTPN7-214ENST00000491584 TCOF1Q13428 1488 aaKnown RBP18.13■□□□□ 0.49
PTPN7-214ENST00000491584 CCDC141Q6ZP82 1450 aa18.13■□□□□ 0.49
PTPN7-214ENST00000491584 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP18.11■□□□□ 0.49
PTPN7-214ENST00000491584 PTPN23Q9H3S7 1636 aa18.09■□□□□ 0.49
PTPN7-214ENST00000491584 ARHGEF5Q12774 1597 aa18.08■□□□□ 0.48
PTPN7-214ENST00000491584 DHX29Q7Z478 1369 aaKnown RBP18.07■□□□□ 0.48
PTPN7-214ENST00000491584 NCKAP5LQ9HCH0 1330 aa18.06■□□□□ 0.48
PTPN7-214ENST00000491584 ITGAEP38570 1179 aa18.06■□□□□ 0.48
PTPN7-214ENST00000491584 GGT6Q6P531 493 aa18.06■□□□□ 0.48
PTPN7-214ENST00000491584 PPP6R1Q9UPN7 881 aa18.06■□□□□ 0.48
PTPN7-214ENST00000491584 DNMT1P26358 1616 aaKnown RBP18.05■□□□□ 0.48
PTPN7-214ENST00000491584 ANKRD30AQ9BXX3 1397 aa18.05■□□□□ 0.48
PTPN7-214ENST00000491584 CHIC2Q9UKJ5 165 aa18.05■□□□□ 0.48
PTPN7-214ENST00000491584 FAM135AQ9P2D6 1515 aa18.04■□□□□ 0.48
PTPN7-214ENST00000491584 A2ML1A8K2U0 1454 aa18.04■□□□□ 0.48
PTPN7-214ENST00000491584 ABCC5O15440 1437 aa18.04■□□□□ 0.48
PTPN7-214ENST00000491584 DAPK1P53355 1430 aa18.04■□□□□ 0.48
PTPN7-214ENST00000491584 KDM5DQ9BY66 1539 aa18.03■□□□□ 0.48
PTPN7-214ENST00000491584 ZNF335Q9H4Z2 1342 aaPredicted RBP18.02■□□□□ 0.48
PTPN7-214ENST00000491584 RRP7BPQ9NSQ0 103 aa18.02■□□□□ 0.48
PTPN7-214ENST00000491584 RRBP1Q9P2E9 1410 aaKnown RBP18.02■□□□□ 0.48
PTPN7-214ENST00000491584 PZPP20742 1482 aa18.01■□□□□ 0.47
PTPN7-214ENST00000491584 NEURL4Q96JN8 1562 aa18.01■□□□□ 0.47
PTPN7-214ENST00000491584 PKD2Q13563 968 aa18.01■□□□□ 0.47
PTPN7-214ENST00000491584 SHANK2Q9UPX8 1470 aa18■□□□□ 0.47
PTPN7-214ENST00000491584 KIF3BO15066 747 aa17.99■□□□□ 0.47
PTPN7-214ENST00000491584 ILDR2Q71H61 639 aa17.99■□□□□ 0.47
PTPN7-214ENST00000491584 SPATA31D1Q6ZQQ2 1576 aa17.99■□□□□ 0.47
PTPN7-214ENST00000491584 POLR1AO95602 1720 aaPredicted RBP17.97■□□□□ 0.47
PTPN7-214ENST00000491584 MAST1Q9Y2H9 1570 aa17.96■□□□□ 0.47
PTPN7-214ENST00000491584 KIF15Q9NS87 1388 aa17.96■□□□□ 0.47
PTPN7-214ENST00000491584 DISP3Q9P2K9 1392 aa17.96■□□□□ 0.47
PTPN7-214ENST00000491584 RNF17Q9BXT8 1623 aaKnown RBP17.96■□□□□ 0.47
PTPN7-214ENST00000491584 ROCK1Q13464 1354 aa17.95■□□□□ 0.46
PTPN7-214ENST00000491584 TNRQ92752 1358 aa17.95■□□□□ 0.46
PTPN7-214ENST00000491584 FBXO31Q5XUX0 539 aaPredicted RBP17.95■□□□□ 0.46
PTPN7-214ENST00000491584 MROH1Q8NDA8 1641 aa17.94■□□□□ 0.46
PTPN7-214ENST00000491584 ABCC3O15438 1527 aa17.91■□□□□ 0.46
PTPN7-214ENST00000491584 DUOX2Q9NRD8 1548 aa17.91■□□□□ 0.46
PTPN7-214ENST00000491584 ACIN1Q9UKV3 1341 aaKnown RBP17.91■□□□□ 0.46
PTPN7-214ENST00000491584 VWDEQ8N2E2 1590 aa17.91■□□□□ 0.46
PTPN7-214ENST00000491584 EIF2AK4Q9P2K8 1649 aaKnown RBP17.9■□□□□ 0.46
PTPN7-214ENST00000491584 NLRP1Q9C000 1473 aa17.9■□□□□ 0.46
PTPN7-214ENST00000491584 ZC3H13Q5T200 1668 aaKnown RBP17.9■□□□□ 0.46
PTPN7-214ENST00000491584 DEPDC5O75140 1603 aa17.89■□□□□ 0.45
PTPN7-214ENST00000491584 WASHC2CQ9Y4E1 1318 aa17.89■□□□□ 0.45
PTPN7-214ENST00000491584 MED14O60244 1454 aa17.88■□□□□ 0.45
PTPN7-214ENST00000491584 ADGRL2O95490 1459 aa17.88■□□□□ 0.45
PTPN7-214ENST00000491584 KANK1Q14678 1352 aa17.88■□□□□ 0.45
PTPN7-214ENST00000491584 CPS1P31327 1500 aa17.88■□□□□ 0.45
PTPN7-214ENST00000491584 UGGT1Q9NYU2 1555 aa17.87■□□□□ 0.45
PTPN7-214ENST00000491584 ALKQ9UM73 1620 aa17.87■□□□□ 0.45
PTPN7-214ENST00000491584 GRWD1Q9BQ67 446 aaKnown RBP eCLIP17.87■□□□□ 0.45
PTPN7-214ENST00000491584 ERBINQ96RT1 1412 aa17.87■□□□□ 0.45
PTPN7-214ENST00000491584 UBAP1LF5GYI3 381 aa17.86■□□□□ 0.45
PTPN7-214ENST00000491584 ANKRD50Q9ULJ7 1429 aa17.86■□□□□ 0.45
PTPN7-214ENST00000491584 SOCS7O14512 581 aa17.85■□□□□ 0.45
PTPN7-214ENST00000491584 ERVK-7P63135 1459 aa17.84■□□□□ 0.45
PTPN7-214ENST00000491584 CROCC2H7BZ55 1655 aa17.83■□□□□ 0.44
PTPN7-214ENST00000491584 CEP152O94986 1710 aa17.82■□□□□ 0.44
PTPN7-214ENST00000491584 IQGAP1P46940 1657 aa17.82■□□□□ 0.44
PTPN7-214ENST00000491584 NPHP4O75161 1426 aaPredicted RBP17.81■□□□□ 0.44
PTPN7-214ENST00000491584 STRCP1A6NGW2 1772 aa17.81■□□□□ 0.44
PTPN7-214ENST00000491584 PRDM15P57071 1507 aaPredicted RBP17.81■□□□□ 0.44
PTPN7-214ENST00000491584 TRIM26Q12899 539 aaPredicted RBP17.8■□□□□ 0.44
PTPN7-214ENST00000491584 UBR1Q8IWV7 1749 aa17.79■□□□□ 0.44
PTPN7-214ENST00000491584 ANKLE2Q86XL3 938 aa17.79■□□□□ 0.44
PTPN7-214ENST00000491584 THEMISQ8N1K5 641 aaPredicted RBP17.79■□□□□ 0.44
PTPN7-214ENST00000491584 TRIM52Q96A61 297 aa17.77■□□□□ 0.44
PTPN7-214ENST00000491584 HFM1A2PYH4 1435 aa17.76■□□□□ 0.43
PTPN7-214ENST00000491584 ARHGAP31Q2M1Z3 1444 aa17.76■□□□□ 0.43
PTPN7-214ENST00000491584 ARHGAP23Q9P227 1491 aa17.75■□□□□ 0.43
PTPN7-214ENST00000491584 SYNMO15061 1565 aa17.74■□□□□ 0.43
PTPN7-214ENST00000491584 SLIT1O75093 1534 aa17.74■□□□□ 0.43
PTPN7-214ENST00000491584 LRRC7Q96NW7 1537 aa17.74■□□□□ 0.43
PTPN7-214ENST00000491584 HSPA1LP34931 641 aa17.74■□□□□ 0.43
PTPN7-214ENST00000491584 NUP155O75694 1391 aa17.74■□□□□ 0.43
PTPN7-214ENST00000491584 MED1Q15648 1581 aaPredicted RBP17.74■□□□□ 0.43
PTPN7-214ENST00000491584 NAIPQ13075 1403 aa17.73■□□□□ 0.43
PTPN7-214ENST00000491584 HRCP23327 699 aa17.72■□□□□ 0.43
PTPN7-214ENST00000491584 SETD5Q9C0A6 1442 aa17.72■□□□□ 0.43
PTPN7-214ENST00000491584 SCAF11Q99590 1463 aaKnown RBP17.7■□□□□ 0.42
PTPN7-214ENST00000491584 TOM1O60784 492 aa17.7■□□□□ 0.42
PTPN7-214ENST00000491584 LMTK2Q8IWU2 1503 aa17.69■□□□□ 0.42
PTPN7-214ENST00000491584 PIK3C2BO00750 1634 aa17.69■□□□□ 0.42
PTPN7-214ENST00000491584 PIP4K2BP78356 416 aa17.68■□□□□ 0.42
PTPN7-214ENST00000491584 LTKP29376 864 aa17.67■□□□□ 0.42
PTPN7-214ENST00000491584 XIRP1Q702N8 1843 aaKnown RBP17.67■□□□□ 0.42
PTPN7-214ENST00000491584 CFAP65Q6ZU64 1925 aaKnown RBP17.66■□□□□ 0.42
PTPN7-214ENST00000491584 SLC4A1APQ9BWU0 796 aaKnown RBP17.66■□□□□ 0.42
PTPN7-214ENST00000491584 KDM5AP29375 1690 aaKnown RBP17.66■□□□□ 0.42
PTPN7-214ENST00000491584 SCAF1Q9H7N4 1312 aaKnown RBP17.65■□□□□ 0.42
PTPN7-214ENST00000491584 TMEM2Q9UHN6 1383 aa17.62■□□□□ 0.41
PTPN7-214ENST00000491584 EFCAB6Q5THR3 1501 aa17.62■□□□□ 0.41
PTPN7-214ENST00000491584 SLC52A1Q9NWF4 448 aa17.61■□□□□ 0.41
PTPN7-214ENST00000491584 NOS1P29475 1434 aa17.61■□□□□ 0.41
PTPN7-214ENST00000491584 TET3O43151 1660 aa17.61■□□□□ 0.41
PTPN7-214ENST00000491584 MPHOSPH9Q99550 1183 aa17.6■□□□□ 0.41
PTPN7-214ENST00000491584 STAG3Q9UJ98 1225 aa17.6■□□□□ 0.41
Retrieved 100 of 20,778 RNA–protein pairs in 75.1 ms