RNA–Protein interactions for RNA: ENST00000491541.1

SREBF2-208, Transcript of sterol regulatory element binding transcription factor 2, humanhuman

TSL 1 (best)

Gene SREBF2, Length 4,043 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SREBF2-208ENST00000491541 NPC1L1Q9UHC9 1359 aa14.16□□□□□ -0.14
SREBF2-208ENST00000491541 ARHGAP31Q2M1Z3 1444 aa14.15□□□□□ -0.14
SREBF2-208ENST00000491541 NLRP1Q9C000 1473 aa14.15□□□□□ -0.14
SREBF2-208ENST00000491541 SIN3AQ96ST3 1273 aa14.15□□□□□ -0.14
SREBF2-208ENST00000491541 MRC2Q9UBG0 1479 aa14.13□□□□□ -0.15
SREBF2-208ENST00000491541 TTC37Q6PGP7 1564 aa14.13□□□□□ -0.15
SREBF2-208ENST00000491541 PABPN1Q86U42 306 aaKnown RBP eCLIP14.13□□□□□ -0.153e-9■□□□□ 10
SREBF2-208ENST00000491541 NRXN1Q9ULB1 1477 aa14.12□□□□□ -0.15
SREBF2-208ENST00000491541 SETBP1Q9Y6X0 1596 aa14.12□□□□□ -0.15
SREBF2-208ENST00000491541 CDK11AQ9UQ88 783 aaPredicted RBP14.12□□□□□ -0.15
SREBF2-208ENST00000491541 GRIN2AQ12879 1464 aa14.11□□□□□ -0.15
SREBF2-208ENST00000491541 ADGRB2O60241 1585 aa14.11□□□□□ -0.15
SREBF2-208ENST00000491541 IRX6P78412 446 aaPredicted RBP14.11□□□□□ -0.15
SREBF2-208ENST00000491541 DDX10Q13206 875 aaKnown RBP14.11□□□□□ -0.15
SREBF2-208ENST00000491541 KIF7Q2M1P5 1343 aa14.1□□□□□ -0.15
SREBF2-208ENST00000491541 PDS5BQ9NTI5 1447 aa14.1□□□□□ -0.15
SREBF2-208ENST00000491541 TRPM2O94759 1503 aa14.09□□□□□ -0.15
SREBF2-208ENST00000491541 TET3O43151 1660 aa14.09□□□□□ -0.15
SREBF2-208ENST00000491541 NBR1Q14596 966 aa14.09□□□□□ -0.15
SREBF2-208ENST00000491541 CLTCL1P53675 1640 aa14.09□□□□□ -0.15
SREBF2-208ENST00000491541 FAM135AQ9P2D6 1515 aa14.09□□□□□ -0.15
SREBF2-208ENST00000491541 PRAG1Q86YV5 1406 aa14.09□□□□□ -0.15
SREBF2-208ENST00000491541 REREQ9P2R6 1566 aa14.09□□□□□ -0.15
SREBF2-208ENST00000491541 HSPA5P11021 654 aaKnown RBP14.08□□□□□ -0.16
SREBF2-208ENST00000491541 NUDCQ9Y266 331 aa14.08□□□□□ -0.16
SREBF2-208ENST00000491541 MTUS2Q5JR59 1369 aa14.07□□□□□ -0.16
SREBF2-208ENST00000491541 NCBP3Q53F19 620 aaKnown RBP14.06□□□□□ -0.16
SREBF2-208ENST00000491541 IPO9Q96P70 1041 aaKnown RBP14.06□□□□□ -0.16
SREBF2-208ENST00000491541 PLA2R1Q13018 1463 aa14.06□□□□□ -0.16
SREBF2-208ENST00000491541 KDM5AP29375 1690 aaKnown RBP14.05□□□□□ -0.16
SREBF2-208ENST00000491541 KDM2BQ8NHM5 1336 aa14.05□□□□□ -0.16
SREBF2-208ENST00000491541 DEKP35659 375 aaKnown RBP14.05□□□□□ -0.16
SREBF2-208ENST00000491541 PDE3BQ13370 1112 aa14.05□□□□□ -0.16
SREBF2-208ENST00000491541 CLTCQ00610 1675 aaKnown RBP14.05□□□□□ -0.16
SREBF2-208ENST00000491541 ERCC6Q03468 1493 aa14.04□□□□□ -0.16
SREBF2-208ENST00000491541 KIF15Q9NS87 1388 aa14.04□□□□□ -0.16
SREBF2-208ENST00000491541 MROH1Q8NDA8 1641 aa14.04□□□□□ -0.16
SREBF2-208ENST00000491541 PNISRQ8TF01 805 aaKnown RBP14.03□□□□□ -0.16
SREBF2-208ENST00000491541 PIK3C2BO00750 1634 aa14.03□□□□□ -0.16
SREBF2-208ENST00000491541 ZNF521Q96K83 1311 aa14.03□□□□□ -0.16
SREBF2-208ENST00000491541 NOP58Q9Y2X3 529 aaKnown RBP14.03□□□□□ -0.16
SREBF2-208ENST00000491541 PIK3C2GO75747 1445 aa14.02□□□□□ -0.16
SREBF2-208ENST00000491541 N4BP2Q86UW6 1770 aaPredicted RBP14.02□□□□□ -0.16
SREBF2-208ENST00000491541 LMTK2Q8IWU2 1503 aa14.02□□□□□ -0.16
SREBF2-208ENST00000491541 EIF4G2P78344 907 aaKnown RBP eCLIP14.02□□□□□ -0.17
SREBF2-208ENST00000491541 HIRIP3Q9BW71 556 aaPredicted RBP14.02□□□□□ -0.17
SREBF2-208ENST00000491541 IQSEC2Q5JU85 1478 aa14.02□□□□□ -0.17
SREBF2-208ENST00000491541 TUBGCP6Q96RT7 1819 aa14.01□□□□□ -0.17
SREBF2-208ENST00000491541 MYOM2P54296 1465 aa14□□□□□ -0.17
SREBF2-208ENST00000491541 MPHOSPH9Q99550 1183 aa14□□□□□ -0.17
SREBF2-208ENST00000491541 ABCA9Q8IUA7 1624 aa14□□□□□ -0.17
SREBF2-208ENST00000491541 NBPF8Q3BBV2 869 aa13.99□□□□□ -0.17
SREBF2-208ENST00000491541 CDC42BPGQ6DT37 1551 aa13.99□□□□□ -0.17
SREBF2-208ENST00000491541 PTPRTO14522 1441 aa13.99□□□□□ -0.17
SREBF2-208ENST00000491541 ERBINQ96RT1 1412 aa13.99□□□□□ -0.17
SREBF2-208ENST00000491541 A2MP01023 1474 aa13.97□□□□□ -0.17
SREBF2-208ENST00000491541 TCERG1O14776 1098 aaKnown RBP13.97□□□□□ -0.17
SREBF2-208ENST00000491541 PPLO60437 1756 aa13.97□□□□□ -0.17
SREBF2-208ENST00000491541 RTL5Q5HYW3 569 aaPredicted RBP13.97□□□□□ -0.17
SREBF2-208ENST00000491541 TRMT2AQ8IZ69 625 aaKnown RBP13.97□□□□□ -0.17
SREBF2-208ENST00000491541 ANO8Q9HCE9 1232 aaPredicted RBP13.97□□□□□ -0.17
SREBF2-208ENST00000491541 ADGRL1O94910 1474 aa13.97□□□□□ -0.17
SREBF2-208ENST00000491541 CCDC184Q52MB2 194 aa13.96□□□□□ -0.18
SREBF2-208ENST00000491541 RTN4Q9NQC3 1192 aaKnown RBP13.96□□□□□ -0.18
SREBF2-208ENST00000491541 KANK1Q14678 1352 aa13.95□□□□□ -0.18
SREBF2-208ENST00000491541 MAP3K4Q9Y6R4 1608 aa13.95□□□□□ -0.18
SREBF2-208ENST00000491541 USP47Q96K76 1375 aa13.95□□□□□ -0.18
SREBF2-208ENST00000491541 NINLQ9Y2I6 1382 aa13.94□□□□□ -0.18
SREBF2-208ENST00000491541 ABCC1P33527 1531 aa13.94□□□□□ -0.18
SREBF2-208ENST00000491541 EIF3AQ14152 1382 aaKnown RBP13.94□□□□□ -0.18
SREBF2-208ENST00000491541 UHRF1BP1LA0JNW5 1464 aa13.93□□□□□ -0.18
SREBF2-208ENST00000491541 BACH2Q9BYV9 841 aa13.93□□□□□ -0.18
SREBF2-208ENST00000491541 RALBP1Q15311 655 aa13.92□□□□□ -0.18
SREBF2-208ENST00000491541 CCDC136Q96JN2 1154 aa13.92□□□□□ -0.18
SREBF2-208ENST00000491541 PER1O15534 1290 aaPredicted RBP13.92□□□□□ -0.18
SREBF2-208ENST00000491541 ZNF518AQ6AHZ1 1483 aa13.91□□□□□ -0.18
SREBF2-208ENST00000491541 HNRNPUQ00839 825 aaKnown RBP eCLIP13.91□□□□□ -0.18
SREBF2-208ENST00000491541 L3MBTL2Q969R5 705 aa13.91□□□□□ -0.18
SREBF2-208ENST00000491541 UBE2Q2Q8WVN8 375 aa13.91□□□□□ -0.18
SREBF2-208ENST00000491541 MYBBP1AQ9BQG0 1328 aaKnown RBP13.9□□□□□ -0.18
SREBF2-208ENST00000491541 SYCP2Q9BX26 1530 aa13.9□□□□□ -0.18
SREBF2-208ENST00000491541 ADGRB1O14514 1584 aa13.9□□□□□ -0.18
SREBF2-208ENST00000491541 ZCCHC11Q5TAX3 1644 aaKnown RBP13.89□□□□□ -0.19
SREBF2-208ENST00000491541 NCOA3Q9Y6Q9 1424 aa13.89□□□□□ -0.19
SREBF2-208ENST00000491541 SBNO2Q9Y2G9 1366 aa13.89□□□□□ -0.19
SREBF2-208ENST00000491541 RTEL1-TNFRSF6BF6WH68 1400 aa13.88□□□□□ -0.19
SREBF2-208ENST00000491541 C9orf84Q5VXU9 1444 aa13.87□□□□□ -0.19
SREBF2-208ENST00000491541 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP13.87□□□□□ -0.192e-6■■□□□ 13.9
SREBF2-208ENST00000491541 MROH2AA6NES4 1674 aa13.87□□□□□ -0.19
SREBF2-208ENST00000491541 ANKRD50Q9ULJ7 1429 aa13.87□□□□□ -0.19
SREBF2-208ENST00000491541 PAK3O75914 559 aaPredicted RBP13.86□□□□□ -0.19
SREBF2-208ENST00000491541 FRMPD1Q5SYB0 1578 aa13.86□□□□□ -0.19
SREBF2-208ENST00000491541 ASXL1Q8IXJ9 1541 aa13.85□□□□□ -0.19
SREBF2-208ENST00000491541 KIF1BO60333 1816 aa13.85□□□□□ -0.19
SREBF2-208ENST00000491541 ZFYVE16Q7Z3T8 1539 aa13.85□□□□□ -0.19
SREBF2-208ENST00000491541 ZBTB4Q9P1Z0 1013 aaPredicted RBP13.85□□□□□ -0.19
SREBF2-208ENST00000491541 ATP10BO94823 1461 aa13.84□□□□□ -0.19
SREBF2-208ENST00000491541 RRP1P56182 461 aaKnown RBP13.83□□□□□ -0.2
SREBF2-208ENST00000491541 EIF5BO60841 1220 aaKnown RBP13.83□□□□□ -0.2
SREBF2-208ENST00000491541 ANKRD30AQ9BXX3 1397 aa13.83□□□□□ -0.2
Retrieved 100 of 20,778 RNA–protein pairs in 12.4 ms