RNA–Protein interactions for RNA: ENST00000491539.5

NCK1-211, Transcript of NCK adaptor protein 1, humanhuman

TSL 4

Gene NCK1, Length 587 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NCK1-211ENST00000491539 CAMSAP2Q08AD1 1489 aa22.54■■□□□ 1.2
NCK1-211ENST00000491539 MTUS2Q5JR59 1369 aa22.54■■□□□ 1.2
NCK1-211ENST00000491539 IQGAP1P46940 1657 aa22.54■■□□□ 1.2
NCK1-211ENST00000491539 PZPP20742 1482 aa22.54■■□□□ 1.2
NCK1-211ENST00000491539 CPS1P31327 1500 aa22.52■■□□□ 1.2
NCK1-211ENST00000491539 FAM135AQ9P2D6 1515 aa22.52■■□□□ 1.2
NCK1-211ENST00000491539 PKD2Q13563 968 aa22.52■■□□□ 1.2
NCK1-211ENST00000491539 RNF17Q9BXT8 1623 aaKnown RBP22.52■■□□□ 1.2
NCK1-211ENST00000491539 CEP152O94986 1710 aa22.51■■□□□ 1.19
NCK1-211ENST00000491539 DEPDC5O75140 1603 aa22.51■■□□□ 1.19
NCK1-211ENST00000491539 PPP6R1Q9UPN7 881 aa22.51■■□□□ 1.19
NCK1-211ENST00000491539 CCDC141Q6ZP82 1450 aa22.51■■□□□ 1.19
NCK1-211ENST00000491539 RTEL1-TNFRSF6BF6WH68 1400 aa22.49■■□□□ 1.19
NCK1-211ENST00000491539 CEP162Q5TB80 1403 aa22.49■■□□□ 1.19
NCK1-211ENST00000491539 ZC3H13Q5T200 1668 aaKnown RBP22.49■■□□□ 1.19
NCK1-211ENST00000491539 SHANK2Q9UPX8 1470 aa22.48■■□□□ 1.19
NCK1-211ENST00000491539 MROH1Q8NDA8 1641 aa22.48■■□□□ 1.19
NCK1-211ENST00000491539 TNRQ92752 1358 aa22.48■■□□□ 1.19
NCK1-211ENST00000491539 ARHGEF5Q12774 1597 aa22.46■■□□□ 1.19
NCK1-211ENST00000491539 NCOA2Q15596 1464 aa22.46■■□□□ 1.19
NCK1-211ENST00000491539 SYNMO15061 1565 aa22.46■■□□□ 1.19
NCK1-211ENST00000491539 XIRP1Q702N8 1843 aaKnown RBP22.45■■□□□ 1.19
NCK1-211ENST00000491539 DHX29Q7Z478 1369 aaKnown RBP22.45■■□□□ 1.18
NCK1-211ENST00000491539 UGGT1Q9NYU2 1555 aa22.45■■□□□ 1.18
NCK1-211ENST00000491539 FBXO31Q5XUX0 539 aaPredicted RBP22.44■■□□□ 1.18
NCK1-211ENST00000491539 UBR1Q8IWV7 1749 aa22.43■■□□□ 1.18
NCK1-211ENST00000491539 CFAP65Q6ZU64 1925 aaKnown RBP22.42■■□□□ 1.18
NCK1-211ENST00000491539 HSPA1LP34931 641 aa22.42■■□□□ 1.18
NCK1-211ENST00000491539 EIF2AK4Q9P2K8 1649 aaKnown RBP22.42■■□□□ 1.18
NCK1-211ENST00000491539 ABCC3O15438 1527 aa22.41■■□□□ 1.18
NCK1-211ENST00000491539 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP22.4■■□□□ 1.18
NCK1-211ENST00000491539 MAST1Q9Y2H9 1570 aa22.4■■□□□ 1.18
NCK1-211ENST00000491539 MED14O60244 1454 aa22.4■■□□□ 1.18
NCK1-211ENST00000491539 NLRP1Q9C000 1473 aa22.4■■□□□ 1.18
NCK1-211ENST00000491539 SCAF1Q9H7N4 1312 aaKnown RBP22.38■■□□□ 1.17
NCK1-211ENST00000491539 PIP4K2BP78356 416 aa22.37■■□□□ 1.17
NCK1-211ENST00000491539 NPHP4O75161 1426 aaPredicted RBP22.37■■□□□ 1.17
NCK1-211ENST00000491539 CROCC2H7BZ55 1655 aa22.36■■□□□ 1.17
NCK1-211ENST00000491539 KIF3BO15066 747 aa22.35■■□□□ 1.17
NCK1-211ENST00000491539 ERVK-7P63135 1459 aa22.34■■□□□ 1.17
NCK1-211ENST00000491539 MIA2Q96PC5 1412 aa22.33■■□□□ 1.17
NCK1-211ENST00000491539 LRRC7Q96NW7 1537 aa22.33■■□□□ 1.17
NCK1-211ENST00000491539 LOC105371045A0A1W2PR82 267 aa22.29■■□□□ 1.16
NCK1-211ENST00000491539 PIK3C2BO00750 1634 aa22.27■■□□□ 1.16
NCK1-211ENST00000491539 WASHC2CQ9Y4E1 1318 aa22.27■■□□□ 1.16
NCK1-211ENST00000491539 PRDM15P57071 1507 aaPredicted RBP22.26■■□□□ 1.15
NCK1-211ENST00000491539 TOM1O60784 492 aa22.23■■□□□ 1.15
NCK1-211ENST00000491539 LRRC9Q6ZRR7 1453 aa22.22■■□□□ 1.15
NCK1-211ENST00000491539 ANKLE2Q86XL3 938 aa22.22■■□□□ 1.15
NCK1-211ENST00000491539 SENP3Q9H4L4 574 aaPredicted RBP22.22■■□□□ 1.15
NCK1-211ENST00000491539 VPS8Q8N3P4 1428 aa22.21■■□□□ 1.15
NCK1-211ENST00000491539 SCAF11Q99590 1463 aaKnown RBP22.2■■□□□ 1.14
NCK1-211ENST00000491539 ARHGAP23Q9P227 1491 aa22.2■■□□□ 1.14
NCK1-211ENST00000491539 SLIT1O75093 1534 aa22.2■■□□□ 1.14
NCK1-211ENST00000491539 THEMISQ8N1K5 641 aaPredicted RBP22.18■■□□□ 1.14
NCK1-211ENST00000491539 SETD1AO15047 1707 aaKnown RBP22.17■■□□□ 1.14
NCK1-211ENST00000491539 DUOX2Q9NRD8 1548 aa22.16■■□□□ 1.14
NCK1-211ENST00000491539 KDM5AP29375 1690 aaKnown RBP22.14■■□□□ 1.14
NCK1-211ENST00000491539 ROBO1Q9Y6N7 1651 aa22.14■■□□□ 1.13
NCK1-211ENST00000491539 MYO5BQ9ULV0 1848 aa22.13■■□□□ 1.13
NCK1-211ENST00000491539 MAP3K1Q13233 1512 aa22.13■■□□□ 1.13
NCK1-211ENST00000491539 PHF23Q9BUL5 403 aaPredicted RBP22.12■■□□□ 1.13
NCK1-211ENST00000491539 MYOM3Q5VTT5 1437 aa22.11■■□□□ 1.13
NCK1-211ENST00000491539 PTPN23Q9H3S7 1636 aa22.1■■□□□ 1.13
NCK1-211ENST00000491539 RSPH4AQ5TD94 716 aa22.09■■□□□ 1.13
NCK1-211ENST00000491539 NWD1Q149M9 1564 aa22.08■■□□□ 1.13
NCK1-211ENST00000491539 LTKP29376 864 aa22.06■■□□□ 1.12
NCK1-211ENST00000491539 ARHGAP31Q2M1Z3 1444 aa22.06■■□□□ 1.12
NCK1-211ENST00000491539 ERBINQ96RT1 1412 aa22.06■■□□□ 1.12
NCK1-211ENST00000491539 TSPY4P0CV99 314 aa22.05■■□□□ 1.12
NCK1-211ENST00000491539 TSPY10P0CW01 314 aa22.05■■□□□ 1.12
NCK1-211ENST00000491539 RGS17Q9UGC6 210 aaPredicted RBP22.05■■□□□ 1.12
NCK1-211ENST00000491539 EFCAB6Q5THR3 1501 aa22.05■■□□□ 1.12
NCK1-211ENST00000491539 ADGRB3O60242 1522 aa22.04■■□□□ 1.12
NCK1-211ENST00000491539 TET3O43151 1660 aa22.04■■□□□ 1.12
NCK1-211ENST00000491539 GCC2Q8IWJ2 1684 aa22.04■■□□□ 1.12
NCK1-211ENST00000491539 KIF15Q9NS87 1388 aa22.03■■□□□ 1.12
NCK1-211ENST00000491539 KANK4Q5T7N3 995 aaPredicted RBP22.03■■□□□ 1.12
NCK1-211ENST00000491539 ABCC5O15440 1437 aa22.01■■□□□ 1.11
NCK1-211ENST00000491539 LMTK2Q8IWU2 1503 aa22.01■■□□□ 1.11
NCK1-211ENST00000491539 PHLPP1O60346 1717 aa22■■□□□ 1.11
NCK1-211ENST00000491539 TMEM2Q9UHN6 1383 aa21.98■■□□□ 1.11
NCK1-211ENST00000491539 DAPK1P53355 1430 aa21.97■■□□□ 1.11
NCK1-211ENST00000491539 CHD2O14647 1828 aaKnown RBP21.97■■□□□ 1.11
NCK1-211ENST00000491539 TXNDC2Q86VQ3 553 aa21.95■■□□□ 1.1
NCK1-211ENST00000491539 TMEM94Q12767 1356 aa21.95■■□□□ 1.1
NCK1-211ENST00000491539 NKTRP30414 1462 aaKnown RBP21.94■■□□□ 1.1
NCK1-211ENST00000491539 COL16A1Q07092 1604 aaPredicted RBP21.94■■□□□ 1.1
NCK1-211ENST00000491539 FAM135BQ49AJ0 1406 aa21.93■■□□□ 1.1
NCK1-211ENST00000491539 NOS1P29475 1434 aa21.89■■□□□ 1.1
NCK1-211ENST00000491539 RBM33Q96EV2 1170 aaKnown RBP21.89■■□□□ 1.09
NCK1-211ENST00000491539 FGD6Q6ZV73 1430 aa21.89■■□□□ 1.09
NCK1-211ENST00000491539 RRP7BPQ9NSQ0 103 aa21.88■■□□□ 1.09
NCK1-211ENST00000491539 TMEM131LA2VDJ0 1609 aa21.88■■□□□ 1.09
NCK1-211ENST00000491539 POTEAQ6S8J7 498 aa21.87■■□□□ 1.09
NCK1-211ENST00000491539 GRWD1Q9BQ67 446 aaKnown RBP eCLIP21.87■■□□□ 1.093e-8■■■□□ 14.9
NCK1-211ENST00000491539 LRP6O75581 1613 aa21.84■■□□□ 1.09
NCK1-211ENST00000491539 ZFYVE9O95405 1425 aa21.84■■□□□ 1.09
NCK1-211ENST00000491539 E9PCH4 1651 aa21.84■■□□□ 1.09
NCK1-211ENST00000491539 UNC13BO14795 1591 aa21.83■■□□□ 1.09
Retrieved 100 of 20,778 RNA–protein pairs in 30 ms