RNA–Protein interactions for RNA: ENST00000491521.1

CDK9-204, Transcript of cyclin dependent kinase 9, humanhuman

TSL 3

Gene CDK9, Length 510 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDK9-204ENST00000491521 FGD6Q6ZV73 1430 aa21.04■□□□□ 0.96
CDK9-204ENST00000491521 FBXO31Q5XUX0 539 aaPredicted RBP21.03■□□□□ 0.96
CDK9-204ENST00000491521 NCOA1Q15788 1441 aa21.03■□□□□ 0.96
CDK9-204ENST00000491521 CROCC2H7BZ55 1655 aa21.02■□□□□ 0.96
CDK9-204ENST00000491521 PPARGC1BQ86YN6 1023 aaKnown RBP21.02■□□□□ 0.96
CDK9-204ENST00000491521 CEP170BQ9Y4F5 1589 aaPredicted RBP21.02■□□□□ 0.95
CDK9-204ENST00000491521 CERKQ8TCT0 537 aa21.01■□□□□ 0.95
CDK9-204ENST00000491521 RRP7BPQ9NSQ0 103 aa21.01■□□□□ 0.95
CDK9-204ENST00000491521 ZNF142P52746 1687 aaPredicted RBP21.01■□□□□ 0.95
CDK9-204ENST00000491521 ABCC5O15440 1437 aa21.01■□□□□ 0.95
CDK9-204ENST00000491521 NCKAP5LQ9HCH0 1330 aa21.01■□□□□ 0.95
CDK9-204ENST00000491521 DAPK1P53355 1430 aa20.99■□□□□ 0.95
CDK9-204ENST00000491521 CHIC2Q9UKJ5 165 aa20.99■□□□□ 0.95
CDK9-204ENST00000491521 RNF17Q9BXT8 1623 aaKnown RBP20.99■□□□□ 0.95
CDK9-204ENST00000491521 TNRQ92752 1358 aa20.98■□□□□ 0.95
CDK9-204ENST00000491521 KIF15Q9NS87 1388 aa20.98■□□□□ 0.95
CDK9-204ENST00000491521 EIF2AK4Q9P2K8 1649 aaKnown RBP20.98■□□□□ 0.95
CDK9-204ENST00000491521 PZPP20742 1482 aa20.98■□□□□ 0.95
CDK9-204ENST00000491521 DUOX2Q9NRD8 1548 aa20.98■□□□□ 0.95
CDK9-204ENST00000491521 FAM135AQ9P2D6 1515 aa20.98■□□□□ 0.95
CDK9-204ENST00000491521 DNMT1P26358 1616 aaKnown RBP20.97■□□□□ 0.95
CDK9-204ENST00000491521 PTPRTO14522 1441 aa20.97■□□□□ 0.95
CDK9-204ENST00000491521 TCOF1Q13428 1488 aaKnown RBP20.97■□□□□ 0.95
CDK9-204ENST00000491521 SHANK2Q9UPX8 1470 aa20.97■□□□□ 0.95
CDK9-204ENST00000491521 FAM50AQ14320 339 aaKnown RBP20.97■□□□□ 0.95
CDK9-204ENST00000491521 ABCC3O15438 1527 aa20.95■□□□□ 0.94
CDK9-204ENST00000491521 CEP152O94986 1710 aa20.95■□□□□ 0.94
CDK9-204ENST00000491521 A2ML1A8K2U0 1454 aa20.94■□□□□ 0.94
CDK9-204ENST00000491521 CFAP65Q6ZU64 1925 aaKnown RBP20.94■□□□□ 0.94
CDK9-204ENST00000491521 MROH1Q8NDA8 1641 aa20.93■□□□□ 0.94
CDK9-204ENST00000491521 GRWD1Q9BQ67 446 aaKnown RBP eCLIP20.93■□□□□ 0.941e-7■□□□□ 9.9
CDK9-204ENST00000491521 ZC3H13Q5T200 1668 aaKnown RBP20.93■□□□□ 0.94
CDK9-204ENST00000491521 PLA2R1Q13018 1463 aa20.9■□□□□ 0.94
CDK9-204ENST00000491521 ERBINQ96RT1 1412 aa20.89■□□□□ 0.94
CDK9-204ENST00000491521 ANKRD30AQ9BXX3 1397 aa20.89■□□□□ 0.93
CDK9-204ENST00000491521 PKD2Q13563 968 aa20.89■□□□□ 0.93
CDK9-204ENST00000491521 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP20.85■□□□□ 0.93
CDK9-204ENST00000491521 POLR1AO95602 1720 aaPredicted RBP20.84■□□□□ 0.93
CDK9-204ENST00000491521 PRDM15P57071 1507 aaPredicted RBP20.84■□□□□ 0.93
CDK9-204ENST00000491521 ZNF335Q9H4Z2 1342 aaPredicted RBP20.84■□□□□ 0.93
CDK9-204ENST00000491521 ERVK-7P63135 1459 aa20.84■□□□□ 0.93
CDK9-204ENST00000491521 NLRP1Q9C000 1473 aa20.84■□□□□ 0.93
CDK9-204ENST00000491521 LTBP4Q8N2S1 1624 aa20.83■□□□□ 0.93
CDK9-204ENST00000491521 SPATA31D1Q6ZQQ2 1576 aa20.83■□□□□ 0.92
CDK9-204ENST00000491521 UGGT1Q9NYU2 1555 aa20.83■□□□□ 0.92
CDK9-204ENST00000491521 KANK1Q14678 1352 aa20.83■□□□□ 0.92
CDK9-204ENST00000491521 THEMISQ8N1K5 641 aaPredicted RBP20.82■□□□□ 0.92
CDK9-204ENST00000491521 DEPDC5O75140 1603 aa20.82■□□□□ 0.92
CDK9-204ENST00000491521 ANKLE2Q86XL3 938 aa20.79■□□□□ 0.92
CDK9-204ENST00000491521 ADGRL2O95490 1459 aa20.79■□□□□ 0.92
CDK9-204ENST00000491521 NEURL4Q96JN8 1562 aa20.78■□□□□ 0.92
CDK9-204ENST00000491521 ITGAEP38570 1179 aa20.78■□□□□ 0.92
CDK9-204ENST00000491521 ARHGAP31Q2M1Z3 1444 aa20.74■□□□□ 0.91
CDK9-204ENST00000491521 ANKRD50Q9ULJ7 1429 aa20.73■□□□□ 0.91
CDK9-204ENST00000491521 UBR1Q8IWV7 1749 aa20.73■□□□□ 0.91
CDK9-204ENST00000491521 NPHP4O75161 1426 aaPredicted RBP20.72■□□□□ 0.91
CDK9-204ENST00000491521 VWDEQ8N2E2 1590 aa20.71■□□□□ 0.91
CDK9-204ENST00000491521 STAG3Q9UJ98 1225 aa20.7■□□□□ 0.9
CDK9-204ENST00000491521 LMTK2Q8IWU2 1503 aa20.69■□□□□ 0.9
CDK9-204ENST00000491521 IQGAP1P46940 1657 aa20.69■□□□□ 0.9
CDK9-204ENST00000491521 IQSEC2Q5JU85 1478 aa20.69■□□□□ 0.9
CDK9-204ENST00000491521 PIK3C2BO00750 1634 aa20.68■□□□□ 0.9
CDK9-204ENST00000491521 UBAP1LF5GYI3 381 aa20.68■□□□□ 0.9
CDK9-204ENST00000491521 EFCAB6Q5THR3 1501 aa20.68■□□□□ 0.9
CDK9-204ENST00000491521 MED14O60244 1454 aa20.66■□□□□ 0.9
CDK9-204ENST00000491521 SYNMO15061 1565 aa20.65■□□□□ 0.9
CDK9-204ENST00000491521 TXNDC2Q86VQ3 553 aa20.64■□□□□ 0.89
CDK9-204ENST00000491521 SCAF11Q99590 1463 aaKnown RBP20.63■□□□□ 0.89
CDK9-204ENST00000491521 ROCK1Q13464 1354 aa20.63■□□□□ 0.89
CDK9-204ENST00000491521 IDI1Q13907 227 aa20.63■□□□□ 0.89
CDK9-204ENST00000491521 LTKP29376 864 aa20.62■□□□□ 0.89
CDK9-204ENST00000491521 EID1Q9Y6B2 187 aa20.62■□□□□ 0.89
CDK9-204ENST00000491521 UNC13BO14795 1591 aa20.61■□□□□ 0.89
CDK9-204ENST00000491521 CPS1P31327 1500 aa20.61■□□□□ 0.89
CDK9-204ENST00000491521 TET3O43151 1660 aa20.61■□□□□ 0.89
CDK9-204ENST00000491521 SCAF1Q9H7N4 1312 aaKnown RBP20.6■□□□□ 0.89
CDK9-204ENST00000491521 SLIT1O75093 1534 aa20.6■□□□□ 0.89
CDK9-204ENST00000491521 NOS1P29475 1434 aa20.6■□□□□ 0.89
CDK9-204ENST00000491521 ARHGAP23Q9P227 1491 aa20.59■□□□□ 0.89
CDK9-204ENST00000491521 GCC2Q8IWJ2 1684 aa20.58■□□□□ 0.89
CDK9-204ENST00000491521 TRIM26Q12899 539 aaPredicted RBP20.58■□□□□ 0.89
CDK9-204ENST00000491521 SENP3Q9H4L4 574 aaPredicted RBP20.58■□□□□ 0.89
CDK9-204ENST00000491521 TMEM2Q9UHN6 1383 aa20.58■□□□□ 0.88
CDK9-204ENST00000491521 STRCP1A6NGW2 1772 aa20.57■□□□□ 0.88
CDK9-204ENST00000491521 PIP4K2BP78356 416 aa20.56■□□□□ 0.88
CDK9-204ENST00000491521 ADGRB3O60242 1522 aa20.56■□□□□ 0.88
CDK9-204ENST00000491521 RPRD2Q5VT52 1461 aaKnown RBP20.56■□□□□ 0.88
CDK9-204ENST00000491521 NUP155O75694 1391 aa20.55■□□□□ 0.88
CDK9-204ENST00000491521 CHGAP10645 457 aaKnown RBP20.54■□□□□ 0.88
CDK9-204ENST00000491521 SLC52A1Q9NWF4 448 aa20.54■□□□□ 0.88
CDK9-204ENST00000491521 MYO5BQ9ULV0 1848 aa20.54■□□□□ 0.88
CDK9-204ENST00000491521 E9PCH4 1651 aa20.54■□□□□ 0.88
CDK9-204ENST00000491521 KDM5AP29375 1690 aaKnown RBP20.54■□□□□ 0.88
CDK9-204ENST00000491521 IQGAP3Q86VI3 1631 aa20.53■□□□□ 0.88
CDK9-204ENST00000491521 BCANQ96GW7 911 aa20.53■□□□□ 0.88
CDK9-204ENST00000491521 RRBP1Q9P2E9 1410 aaKnown RBP20.52■□□□□ 0.87
CDK9-204ENST00000491521 TOM1O60784 492 aa20.5■□□□□ 0.87
CDK9-204ENST00000491521 LRRC7Q96NW7 1537 aa20.49■□□□□ 0.87
CDK9-204ENST00000491521 SLC26A8Q96RN1 970 aa20.49■□□□□ 0.87
CDK9-204ENST00000491521 PPP1R15AO75807 674 aaPredicted RBP20.47■□□□□ 0.87
Retrieved 100 of 20,778 RNA–protein pairs in 39 ms