RNA–Protein interactions for RNA: ENST00000491427.5

STX1A-210, Transcript of syntaxin 1A, humanhuman

TSL 2

Gene STX1A, Length 710 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
STX1A-210ENST00000491427 TCOF1Q13428 1488 aaKnown RBP24.63■■□□□ 1.53
STX1A-210ENST00000491427 A2ML1A8K2U0 1454 aa24.62■■□□□ 1.53
STX1A-210ENST00000491427 ILDR2Q71H61 639 aa24.61■■□□□ 1.53
STX1A-210ENST00000491427 TNRQ92752 1358 aa24.61■■□□□ 1.53
STX1A-210ENST00000491427 CAMSAP2Q08AD1 1489 aa24.61■■□□□ 1.53
STX1A-210ENST00000491427 ZNF142P52746 1687 aaPredicted RBP24.61■■□□□ 1.53
STX1A-210ENST00000491427 ANKLE2Q86XL3 938 aa24.55■■□□□ 1.52
STX1A-210ENST00000491427 THEMISQ8N1K5 641 aaPredicted RBP24.55■■□□□ 1.52
STX1A-210ENST00000491427 DNMT1P26358 1616 aaKnown RBP24.53■■□□□ 1.52
STX1A-210ENST00000491427 PZPP20742 1482 aa24.53■■□□□ 1.52
STX1A-210ENST00000491427 KDM5DQ9BY66 1539 aa24.53■■□□□ 1.52
STX1A-210ENST00000491427 SOCS7O14512 581 aa24.53■■□□□ 1.52
STX1A-210ENST00000491427 FAM135AQ9P2D6 1515 aa24.52■■□□□ 1.52
STX1A-210ENST00000491427 LOC105371045A0A1W2PR82 267 aa24.52■■□□□ 1.52
STX1A-210ENST00000491427 MIA2Q96PC5 1412 aa24.52■■□□□ 1.52
STX1A-210ENST00000491427 VPS8Q8N3P4 1428 aa24.49■■□□□ 1.51
STX1A-210ENST00000491427 ARHGEF5Q12774 1597 aa24.49■■□□□ 1.51
STX1A-210ENST00000491427 LRRC9Q6ZRR7 1453 aa24.48■■□□□ 1.51
STX1A-210ENST00000491427 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP24.48■■□□□ 1.517e-6■■■□□ 16.5
STX1A-210ENST00000491427 SPATA31D1Q6ZQQ2 1576 aa24.46■■□□□ 1.51
STX1A-210ENST00000491427 SCAF1Q9H7N4 1312 aaKnown RBP24.45■■□□□ 1.5
STX1A-210ENST00000491427 TOM1O60784 492 aa24.45■■□□□ 1.5
STX1A-210ENST00000491427 KANK4Q5T7N3 995 aaPredicted RBP24.45■■□□□ 1.5
STX1A-210ENST00000491427 NLRP1Q9C000 1473 aa24.45■■□□□ 1.5
STX1A-210ENST00000491427 PIP4K2BP78356 416 aa24.43■■□□□ 1.5
STX1A-210ENST00000491427 SHANK2Q9UPX8 1470 aa24.42■■□□□ 1.5
STX1A-210ENST00000491427 UGGT1Q9NYU2 1555 aa24.41■■□□□ 1.5
STX1A-210ENST00000491427 CPS1P31327 1500 aa24.4■■□□□ 1.5
STX1A-210ENST00000491427 NPHP4O75161 1426 aaPredicted RBP24.38■■□□□ 1.49
STX1A-210ENST00000491427 NEURL4Q96JN8 1562 aa24.37■■□□□ 1.49
STX1A-210ENST00000491427 MYOM3Q5VTT5 1437 aa24.37■■□□□ 1.49
STX1A-210ENST00000491427 MAP3K1Q13233 1512 aa24.37■■□□□ 1.49
STX1A-210ENST00000491427 HSPA1LP34931 641 aa24.36■■□□□ 1.49
STX1A-210ENST00000491427 APLP2Q06481 763 aa24.36■■□□□ 1.49
STX1A-210ENST00000491427 MAST1Q9Y2H9 1570 aa24.36■■□□□ 1.49
STX1A-210ENST00000491427 POLR1AO95602 1720 aaPredicted RBP24.35■■□□□ 1.49
STX1A-210ENST00000491427 ABCC3O15438 1527 aa24.35■■□□□ 1.49
STX1A-210ENST00000491427 MED14O60244 1454 aa24.34■■□□□ 1.49
STX1A-210ENST00000491427 RNF17Q9BXT8 1623 aaKnown RBP24.32■■□□□ 1.48
STX1A-210ENST00000491427 RRP7BPQ9NSQ0 103 aa24.3■■□□□ 1.48
STX1A-210ENST00000491427 DEPDC5O75140 1603 aa24.3■■□□□ 1.48
STX1A-210ENST00000491427 ERVK-7P63135 1459 aa24.3■■□□□ 1.48
STX1A-210ENST00000491427 DUOX2Q9NRD8 1548 aa24.29■■□□□ 1.48
STX1A-210ENST00000491427 VWDEQ8N2E2 1590 aa24.29■■□□□ 1.48
STX1A-210ENST00000491427 EIF2AK4Q9P2K8 1649 aaKnown RBP24.28■■□□□ 1.48
STX1A-210ENST00000491427 ZC3H13Q5T200 1668 aaKnown RBP24.27■■□□□ 1.48
STX1A-210ENST00000491427 GRWD1Q9BQ67 446 aaKnown RBP eCLIP24.27■■□□□ 1.48
STX1A-210ENST00000491427 KIF15Q9NS87 1388 aa24.27■■□□□ 1.48
STX1A-210ENST00000491427 TXNDC2Q86VQ3 553 aa24.25■■□□□ 1.47
STX1A-210ENST00000491427 EID1Q9Y6B2 187 aa24.23■■□□□ 1.47
STX1A-210ENST00000491427 ABCC5O15440 1437 aa24.23■■□□□ 1.47
STX1A-210ENST00000491427 IQGAP1P46940 1657 aa24.21■■□□□ 1.47
STX1A-210ENST00000491427 MROH1Q8NDA8 1641 aa24.21■■□□□ 1.47
STX1A-210ENST00000491427 KANK1Q14678 1352 aa24.21■■□□□ 1.47
STX1A-210ENST00000491427 LTKP29376 864 aa24.21■■□□□ 1.47
STX1A-210ENST00000491427 ARHGAP31Q2M1Z3 1444 aa24.2■■□□□ 1.46
STX1A-210ENST00000491427 ERBINQ96RT1 1412 aa24.2■■□□□ 1.46
STX1A-210ENST00000491427 STAG3Q9UJ98 1225 aa24.2■■□□□ 1.46
STX1A-210ENST00000491427 SCAF11Q99590 1463 aaKnown RBP24.19■■□□□ 1.46
STX1A-210ENST00000491427 CHIC2Q9UKJ5 165 aa24.18■■□□□ 1.46
STX1A-210ENST00000491427 LRRC7Q96NW7 1537 aa24.18■■□□□ 1.46
STX1A-210ENST00000491427 CEP152O94986 1710 aa24.16■■□□□ 1.46
STX1A-210ENST00000491427 DAPK1P53355 1430 aa24.16■■□□□ 1.46
STX1A-210ENST00000491427 SENP3Q9H4L4 574 aaPredicted RBP24.15■■□□□ 1.46
STX1A-210ENST00000491427 CFAP65Q6ZU64 1925 aaKnown RBP24.15■■□□□ 1.46
STX1A-210ENST00000491427 ANKRD30AQ9BXX3 1397 aa24.15■■□□□ 1.46
STX1A-210ENST00000491427 PTPN23Q9H3S7 1636 aa24.14■■□□□ 1.46
STX1A-210ENST00000491427 FGD6Q6ZV73 1430 aa24.13■■□□□ 1.45
STX1A-210ENST00000491427 PHF23Q9BUL5 403 aaPredicted RBP24.13■■□□□ 1.45
STX1A-210ENST00000491427 PRDM15P57071 1507 aaPredicted RBP24.13■■□□□ 1.45
STX1A-210ENST00000491427 ARHGAP23Q9P227 1491 aa24.13■■□□□ 1.45
STX1A-210ENST00000491427 UBR1Q8IWV7 1749 aa24.13■■□□□ 1.45
STX1A-210ENST00000491427 MED1Q15648 1581 aaPredicted RBP24.12■■□□□ 1.45
STX1A-210ENST00000491427 SLIT1O75093 1534 aa24.11■■□□□ 1.45
STX1A-210ENST00000491427 IDI1Q13907 227 aa24.11■■□□□ 1.45
STX1A-210ENST00000491427 TMEM2Q9UHN6 1383 aa24.1■■□□□ 1.45
STX1A-210ENST00000491427 ALKQ9UM73 1620 aa24.09■■□□□ 1.45
STX1A-210ENST00000491427 STRCP1A6NGW2 1772 aa24.08■■□□□ 1.44
STX1A-210ENST00000491427 SYNMO15061 1565 aa24.07■■□□□ 1.44
STX1A-210ENST00000491427 CROCC2H7BZ55 1655 aa24.06■■□□□ 1.44
STX1A-210ENST00000491427 FAM50AQ14320 339 aaKnown RBP24.04■■□□□ 1.44
STX1A-210ENST00000491427 LMTK2Q8IWU2 1503 aa24.02■■□□□ 1.44
STX1A-210ENST00000491427 KCNA6P17658 529 aa24.02■■□□□ 1.44
STX1A-210ENST00000491427 SLC52A1Q9NWF4 448 aa24.02■■□□□ 1.44
STX1A-210ENST00000491427 PIK3C2BO00750 1634 aa24.02■■□□□ 1.44
STX1A-210ENST00000491427 BCANQ96GW7 911 aa24.01■■□□□ 1.43
STX1A-210ENST00000491427 SLC26A8Q96RN1 970 aa24.01■■□□□ 1.43
STX1A-210ENST00000491427 EFCAB6Q5THR3 1501 aa24■■□□□ 1.43
STX1A-210ENST00000491427 PROSER2Q86WR7 435 aaPredicted RBP24■■□□□ 1.43
STX1A-210ENST00000491427 NOS1P29475 1434 aa23.97■■□□□ 1.43
STX1A-210ENST00000491427 TMEM94Q12767 1356 aa23.97■■□□□ 1.43
STX1A-210ENST00000491427 HDGFP51858 240 aaKnown RBP23.95■■□□□ 1.42
STX1A-210ENST00000491427 ADGRL2O95490 1459 aa23.94■■□□□ 1.42
STX1A-210ENST00000491427 FAM135BQ49AJ0 1406 aa23.94■■□□□ 1.42
STX1A-210ENST00000491427 ANKRD50Q9ULJ7 1429 aa23.93■■□□□ 1.42
STX1A-210ENST00000491427 KDM5AP29375 1690 aaKnown RBP23.92■■□□□ 1.42
STX1A-210ENST00000491427 RBM33Q96EV2 1170 aaKnown RBP23.92■■□□□ 1.42
STX1A-210ENST00000491427 PPP1R15AO75807 674 aaPredicted RBP23.9■■□□□ 1.42
STX1A-210ENST00000491427 TET3O43151 1660 aa23.89■■□□□ 1.42
STX1A-210ENST00000491427 RPRD2Q5VT52 1461 aaKnown RBP23.88■■□□□ 1.41
Retrieved 100 of 20,778 RNA–protein pairs in 25.8 ms