RNA–Protein interactions for RNA: ENST00000491395.5

APP-216, Transcript of amyloid beta precursor protein, humanhuman

TSL 2

Gene APP, Length 619 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
APP-216ENST00000491395 PKD2Q13563 968 aa13.01□□□□□ -0.33
APP-216ENST00000491395 MIA2Q96PC5 1412 aa13.01□□□□□ -0.33
APP-216ENST00000491395 TNRQ92752 1358 aa13□□□□□ -0.33
APP-216ENST00000491395 ZNF335Q9H4Z2 1342 aaPredicted RBP12.98□□□□□ -0.33
APP-216ENST00000491395 A2ML1A8K2U0 1454 aa12.97□□□□□ -0.33
APP-216ENST00000491395 LTBP4Q8N2S1 1624 aa12.97□□□□□ -0.33
APP-216ENST00000491395 CEP170BQ9Y4F5 1589 aaPredicted RBP12.97□□□□□ -0.33
APP-216ENST00000491395 KDM5DQ9BY66 1539 aa12.97□□□□□ -0.33
APP-216ENST00000491395 PZPP20742 1482 aa12.97□□□□□ -0.33
APP-216ENST00000491395 PLA2R1Q13018 1463 aa12.97□□□□□ -0.33
APP-216ENST00000491395 RRP7BPQ9NSQ0 103 aa12.96□□□□□ -0.33
APP-216ENST00000491395 TCOF1Q13428 1488 aaKnown RBP12.96□□□□□ -0.34
APP-216ENST00000491395 MYO3AQ8NEV4 1616 aa12.95□□□□□ -0.34
APP-216ENST00000491395 ABCC5O15440 1437 aa12.95□□□□□ -0.34
APP-216ENST00000491395 MAST1Q9Y2H9 1570 aa12.94□□□□□ -0.34
APP-216ENST00000491395 THEMISQ8N1K5 641 aaPredicted RBP12.94□□□□□ -0.34
APP-216ENST00000491395 CHIC2Q9UKJ5 165 aa12.93□□□□□ -0.34
APP-216ENST00000491395 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP12.93□□□□□ -0.34
APP-216ENST00000491395 KIF15Q9NS87 1388 aa12.93□□□□□ -0.34
APP-216ENST00000491395 FAM135AQ9P2D6 1515 aa12.93□□□□□ -0.34
APP-216ENST00000491395 ANKLE2Q86XL3 938 aa12.92□□□□□ -0.34
APP-216ENST00000491395 ZNF142P52746 1687 aaPredicted RBP12.92□□□□□ -0.34
APP-216ENST00000491395 ABCC3O15438 1527 aa12.92□□□□□ -0.34
APP-216ENST00000491395 DNMT1P26358 1616 aaKnown RBP12.91□□□□□ -0.34
APP-216ENST00000491395 FGD6Q6ZV73 1430 aa12.91□□□□□ -0.34
APP-216ENST00000491395 GRWD1Q9BQ67 446 aaKnown RBP eCLIP12.91□□□□□ -0.347e-11■■□□□ 12.2
APP-216ENST00000491395 NLRP1Q9C000 1473 aa12.9□□□□□ -0.34
APP-216ENST00000491395 DAPK1P53355 1430 aa12.89□□□□□ -0.35
APP-216ENST00000491395 DUOX2Q9NRD8 1548 aa12.89□□□□□ -0.35
APP-216ENST00000491395 UBAP1LF5GYI3 381 aa12.89□□□□□ -0.35
APP-216ENST00000491395 RNF17Q9BXT8 1623 aaKnown RBP12.88□□□□□ -0.35
APP-216ENST00000491395 PTPN23Q9H3S7 1636 aa12.88□□□□□ -0.35
APP-216ENST00000491395 FAM50AQ14320 339 aaKnown RBP12.88□□□□□ -0.35
APP-216ENST00000491395 IQSEC2Q5JU85 1478 aa12.88□□□□□ -0.35
APP-216ENST00000491395 SHANK2Q9UPX8 1470 aa12.88□□□□□ -0.35
APP-216ENST00000491395 ERVK-7P63135 1459 aa12.87□□□□□ -0.35
APP-216ENST00000491395 MROH1Q8NDA8 1641 aa12.87□□□□□ -0.35
APP-216ENST00000491395 UGGT1Q9NYU2 1555 aa12.86□□□□□ -0.35
APP-216ENST00000491395 ANKRD30AQ9BXX3 1397 aa12.86□□□□□ -0.35
APP-216ENST00000491395 ERBINQ96RT1 1412 aa12.86□□□□□ -0.35
APP-216ENST00000491395 EIF2AK4Q9P2K8 1649 aaKnown RBP12.85□□□□□ -0.35
APP-216ENST00000491395 NPHP4O75161 1426 aaPredicted RBP12.85□□□□□ -0.35
APP-216ENST00000491395 SPATA31D1Q6ZQQ2 1576 aa12.84□□□□□ -0.35
APP-216ENST00000491395 NEURL4Q96JN8 1562 aa12.84□□□□□ -0.35
APP-216ENST00000491395 KANK1Q14678 1352 aa12.83□□□□□ -0.36
APP-216ENST00000491395 ARHGAP31Q2M1Z3 1444 aa12.83□□□□□ -0.36
APP-216ENST00000491395 LTKP29376 864 aa12.82□□□□□ -0.36
APP-216ENST00000491395 DISP3Q9P2K9 1392 aa12.81□□□□□ -0.36
APP-216ENST00000491395 ZC3H13Q5T200 1668 aaKnown RBP12.81□□□□□ -0.36
APP-216ENST00000491395 MED14O60244 1454 aa12.81□□□□□ -0.36
APP-216ENST00000491395 TXNDC2Q86VQ3 553 aa12.81□□□□□ -0.36
APP-216ENST00000491395 PRDM15P57071 1507 aaPredicted RBP12.8□□□□□ -0.36
APP-216ENST00000491395 PIP4K2BP78356 416 aa12.8□□□□□ -0.36
APP-216ENST00000491395 IDI1Q13907 227 aa12.8□□□□□ -0.36
APP-216ENST00000491395 PPARGC1BQ86YN6 1023 aaKnown RBP12.8□□□□□ -0.36
APP-216ENST00000491395 STAG3Q9UJ98 1225 aa12.79□□□□□ -0.36
APP-216ENST00000491395 SCAF1Q9H7N4 1312 aaKnown RBP12.79□□□□□ -0.36
APP-216ENST00000491395 CROCC2H7BZ55 1655 aa12.79□□□□□ -0.36
APP-216ENST00000491395 CEP152O94986 1710 aa12.79□□□□□ -0.36
APP-216ENST00000491395 CPS1P31327 1500 aa12.78□□□□□ -0.36
APP-216ENST00000491395 VWDEQ8N2E2 1590 aa12.78□□□□□ -0.36
APP-216ENST00000491395 TOM1O60784 492 aa12.78□□□□□ -0.36
APP-216ENST00000491395 ILDR2Q71H61 639 aa12.78□□□□□ -0.36
APP-216ENST00000491395 EID1Q9Y6B2 187 aa12.78□□□□□ -0.36
APP-216ENST00000491395 ADGRL2O95490 1459 aa12.78□□□□□ -0.36
APP-216ENST00000491395 ANKRD50Q9ULJ7 1429 aa12.77□□□□□ -0.37
APP-216ENST00000491395 DEPDC5O75140 1603 aa12.77□□□□□ -0.37
APP-216ENST00000491395 POLR1AO95602 1720 aaPredicted RBP12.76□□□□□ -0.37
APP-216ENST00000491395 SCAF11Q99590 1463 aaKnown RBP12.76□□□□□ -0.37
APP-216ENST00000491395 LMTK2Q8IWU2 1503 aa12.76□□□□□ -0.37
APP-216ENST00000491395 HSPA1LP34931 641 aa12.75□□□□□ -0.37
APP-216ENST00000491395 ITGAEP38570 1179 aa12.75□□□□□ -0.37
APP-216ENST00000491395 CFAP65Q6ZU64 1925 aaKnown RBP12.75□□□□□ -0.37
APP-216ENST00000491395 ARHGAP23Q9P227 1491 aa12.75□□□□□ -0.37
APP-216ENST00000491395 TMEM2Q9UHN6 1383 aa12.75□□□□□ -0.37
APP-216ENST00000491395 SLIT1O75093 1534 aa12.73□□□□□ -0.37
APP-216ENST00000491395 NOS1P29475 1434 aa12.73□□□□□ -0.37
APP-216ENST00000491395 SLC52A1Q9NWF4 448 aa12.73□□□□□ -0.37
APP-216ENST00000491395 UBR1Q8IWV7 1749 aa12.73□□□□□ -0.37
APP-216ENST00000491395 LRRC7Q96NW7 1537 aa12.72□□□□□ -0.37
APP-216ENST00000491395 IQGAP1P46940 1657 aa12.72□□□□□ -0.37
APP-216ENST00000491395 SLC26A8Q96RN1 970 aa12.71□□□□□ -0.37
APP-216ENST00000491395 SENP3Q9H4L4 574 aaPredicted RBP12.71□□□□□ -0.37
APP-216ENST00000491395 PIK3C2BO00750 1634 aa12.7□□□□□ -0.38
APP-216ENST00000491395 EFCAB6Q5THR3 1501 aa12.7□□□□□ -0.38
APP-216ENST00000491395 ROCK1Q13464 1354 aa12.69□□□□□ -0.38
APP-216ENST00000491395 SYNMO15061 1565 aa12.69□□□□□ -0.38
APP-216ENST00000491395 BCANQ96GW7 911 aa12.69□□□□□ -0.38
APP-216ENST00000491395 KCNA6P17658 529 aa12.68□□□□□ -0.38
APP-216ENST00000491395 ALKQ9UM73 1620 aa12.67□□□□□ -0.38
APP-216ENST00000491395 CHGAP10645 457 aaKnown RBP12.67□□□□□ -0.38
APP-216ENST00000491395 NUP155O75694 1391 aa12.67□□□□□ -0.38
APP-216ENST00000491395 STRCP1A6NGW2 1772 aa12.66□□□□□ -0.38
APP-216ENST00000491395 RPRD2Q5VT52 1461 aaKnown RBP12.66□□□□□ -0.38
APP-216ENST00000491395 RBM33Q96EV2 1170 aaKnown RBP12.66□□□□□ -0.38
APP-216ENST00000491395 SOCS7O14512 581 aa12.65□□□□□ -0.38
APP-216ENST00000491395 PPP1R15AO75807 674 aaPredicted RBP12.65□□□□□ -0.38
APP-216ENST00000491395 PROSER2Q86WR7 435 aaPredicted RBP12.65□□□□□ -0.38
APP-216ENST00000491395 ADGRB3O60242 1522 aa12.64□□□□□ -0.39
APP-216ENST00000491395 HDGFP51858 240 aaKnown RBP12.64□□□□□ -0.39
Retrieved 100 of 20,778 RNA–protein pairs in 27.8 ms