RNA–Protein interactions for RNA: ENST00000491390.1

NCSTN-214, Transcript of nicastrin, humanhuman

TSL 3

Gene NCSTN, Length 592 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NCSTN-214ENST00000491390 GGT6Q6P531 493 aa18.15■□□□□ 0.5
NCSTN-214ENST00000491390 SYNMO15061 1565 aa18.15■□□□□ 0.5
NCSTN-214ENST00000491390 ADGBQ8N7X0 1667 aa18.15■□□□□ 0.5
NCSTN-214ENST00000491390 TNRQ92752 1358 aa18.15■□□□□ 0.5
NCSTN-214ENST00000491390 NPHP4O75161 1426 aaPredicted RBP18.15■□□□□ 0.5
NCSTN-214ENST00000491390 CASKIN1Q8WXD9 1431 aa18.15■□□□□ 0.5
NCSTN-214ENST00000491390 PZPP20742 1482 aa18.14■□□□□ 0.5
NCSTN-214ENST00000491390 PLEKHH2Q8IVE3 1493 aa18.14■□□□□ 0.49
NCSTN-214ENST00000491390 FAM135AQ9P2D6 1515 aa18.13■□□□□ 0.49
NCSTN-214ENST00000491390 HNRNPMP52272 730 aaKnown RBP eCLIP18.13■□□□□ 0.49
NCSTN-214ENST00000491390 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP18.13■□□□□ 0.49
NCSTN-214ENST00000491390 ANKLE2Q86XL3 938 aa18.12■□□□□ 0.49
NCSTN-214ENST00000491390 ZNF777Q9ULD5 760 aaPredicted RBP18.11■□□□□ 0.49
NCSTN-214ENST00000491390 IQGAP1P46940 1657 aa18.11■□□□□ 0.49
NCSTN-214ENST00000491390 NLRP1Q9C000 1473 aa18.1■□□□□ 0.49
NCSTN-214ENST00000491390 FBXO31Q5XUX0 539 aaPredicted RBP18.1■□□□□ 0.49
NCSTN-214ENST00000491390 KDM5DQ9BY66 1539 aa18.08■□□□□ 0.49
NCSTN-214ENST00000491390 UGGT1Q9NYU2 1555 aa18.08■□□□□ 0.48
NCSTN-214ENST00000491390 POTEAQ6S8J7 498 aa18.07■□□□□ 0.48
NCSTN-214ENST00000491390 MIA2Q96PC5 1412 aa18.06■□□□□ 0.48
NCSTN-214ENST00000491390 THEMISQ8N1K5 641 aaPredicted RBP18.06■□□□□ 0.48
NCSTN-214ENST00000491390 SRCAPQ6ZRS2 3230 aa18.05■□□□□ 0.48
NCSTN-214ENST00000491390 FYCO1Q9BQS8 1478 aa18.05■□□□□ 0.48
NCSTN-214ENST00000491390 ZC3H13Q5T200 1668 aaKnown RBP18.05■□□□□ 0.48
NCSTN-214ENST00000491390 DHX29Q7Z478 1369 aaKnown RBP18.04■□□□□ 0.48
NCSTN-214ENST00000491390 MBD5Q9P267 1494 aa18.04■□□□□ 0.48
NCSTN-214ENST00000491390 RTEL1-TNFRSF6BF6WH68 1400 aa18.04■□□□□ 0.48
NCSTN-214ENST00000491390 SENP3Q9H4L4 574 aaPredicted RBP18.03■□□□□ 0.48
NCSTN-214ENST00000491390 FAM135BQ49AJ0 1406 aa18■□□□□ 0.47
NCSTN-214ENST00000491390 CFDP1Q9UEE9 299 aaPredicted RBP18■□□□□ 0.47
NCSTN-214ENST00000491390 XIRP1Q702N8 1843 aaKnown RBP18■□□□□ 0.47
NCSTN-214ENST00000491390 SETD1AO15047 1707 aaKnown RBP17.99■□□□□ 0.47
NCSTN-214ENST00000491390 CCNB3Q8WWL7 1395 aa17.96■□□□□ 0.47
NCSTN-214ENST00000491390 ZNF644Q9H582 1327 aaPredicted RBP17.95■□□□□ 0.46
NCSTN-214ENST00000491390 TIAM1Q13009 1591 aa17.93■□□□□ 0.46
NCSTN-214ENST00000491390 KIF3BO15066 747 aa17.93■□□□□ 0.46
NCSTN-214ENST00000491390 WASHC2CQ9Y4E1 1318 aa17.93■□□□□ 0.46
NCSTN-214ENST00000491390 MTUS2Q5JR59 1369 aa17.92■□□□□ 0.46
NCSTN-214ENST00000491390 SCAF11Q99590 1463 aaKnown RBP17.91■□□□□ 0.46
NCSTN-214ENST00000491390 ARHGAP23Q9P227 1491 aa17.91■□□□□ 0.46
NCSTN-214ENST00000491390 UBR1Q8IWV7 1749 aa17.89■□□□□ 0.46
NCSTN-214ENST00000491390 ERVK-7P63135 1459 aa17.89■□□□□ 0.45
NCSTN-214ENST00000491390 NCOA2Q15596 1464 aa17.89■□□□□ 0.45
NCSTN-214ENST00000491390 SLIT1O75093 1534 aa17.89■□□□□ 0.45
NCSTN-214ENST00000491390 ABCC3O15438 1527 aa17.88■□□□□ 0.45
NCSTN-214ENST00000491390 ROBO1Q9Y6N7 1651 aa17.88■□□□□ 0.45
NCSTN-214ENST00000491390 CCDC141Q6ZP82 1450 aa17.87■□□□□ 0.45
NCSTN-214ENST00000491390 MAP3K1Q13233 1512 aa17.87■□□□□ 0.45
NCSTN-214ENST00000491390 UPF1Q92900 1129 aaKnown RBP eCLIP17.85■□□□□ 0.45
NCSTN-214ENST00000491390 LTKP29376 864 aa17.84■□□□□ 0.45
NCSTN-214ENST00000491390 LRRC9Q6ZRR7 1453 aa17.83■□□□□ 0.45
NCSTN-214ENST00000491390 EHBP1L1Q8N3D4 1523 aa17.82■□□□□ 0.44
NCSTN-214ENST00000491390 CAMSAP2Q08AD1 1489 aa17.82■□□□□ 0.44
NCSTN-214ENST00000491390 TMEM94Q12767 1356 aa17.82■□□□□ 0.44
NCSTN-214ENST00000491390 MROH1Q8NDA8 1641 aa17.82■□□□□ 0.44
NCSTN-214ENST00000491390 CEP162Q5TB80 1403 aa17.81■□□□□ 0.44
NCSTN-214ENST00000491390 ARHGEF5Q12774 1597 aa17.79■□□□□ 0.44
NCSTN-214ENST00000491390 JCADQ9P266 1359 aa17.79■□□□□ 0.44
NCSTN-214ENST00000491390 LRP6O75581 1613 aa17.77■□□□□ 0.44
NCSTN-214ENST00000491390 COL16A1Q07092 1604 aaPredicted RBP17.76■□□□□ 0.43
NCSTN-214ENST00000491390 EIF2AK4Q9P2K8 1649 aaKnown RBP17.76■□□□□ 0.43
NCSTN-214ENST00000491390 RSPH4AQ5TD94 716 aa17.76■□□□□ 0.43
NCSTN-214ENST00000491390 TXNDC2Q86VQ3 553 aa17.76■□□□□ 0.43
NCSTN-214ENST00000491390 PRDM15P57071 1507 aaPredicted RBP17.76■□□□□ 0.43
NCSTN-214ENST00000491390 NWD1Q149M9 1564 aa17.75■□□□□ 0.43
NCSTN-214ENST00000491390 PHLPP1O60346 1717 aa17.75■□□□□ 0.43
NCSTN-214ENST00000491390 TET3O43151 1660 aa17.74■□□□□ 0.43
NCSTN-214ENST00000491390 NKTRP30414 1462 aaKnown RBP17.74■□□□□ 0.43
NCSTN-214ENST00000491390 KCNA6P17658 529 aa17.73■□□□□ 0.43
NCSTN-214ENST00000491390 TMEM2Q9UHN6 1383 aa17.73■□□□□ 0.43
NCSTN-214ENST00000491390 ARHGAP31Q2M1Z3 1444 aa17.72■□□□□ 0.43
NCSTN-214ENST00000491390 MAST1Q9Y2H9 1570 aa17.72■□□□□ 0.43
NCSTN-214ENST00000491390 CDK12Q9NYV4 1490 aaPredicted RBP17.72■□□□□ 0.43
NCSTN-214ENST00000491390 CEP152O94986 1710 aa17.71■□□□□ 0.43
NCSTN-214ENST00000491390 FGD6Q6ZV73 1430 aa17.71■□□□□ 0.43
NCSTN-214ENST00000491390 KDM5AP29375 1690 aaKnown RBP17.71■□□□□ 0.42
NCSTN-214ENST00000491390 PIK3C2BO00750 1634 aa17.7■□□□□ 0.42
NCSTN-214ENST00000491390 LOC105371045A0A1W2PR82 267 aa17.7■□□□□ 0.42
NCSTN-214ENST00000491390 EID1Q9Y6B2 187 aa17.69■□□□□ 0.42
NCSTN-214ENST00000491390 SPATA31A6Q5VVP1 1343 aa17.69■□□□□ 0.42
NCSTN-214ENST00000491390 ZNF772Q68DY9 489 aaPredicted RBP17.68■□□□□ 0.42
NCSTN-214ENST00000491390 SLAIN2Q9P270 581 aa17.68■□□□□ 0.42
NCSTN-214ENST00000491390 PROSER2Q86WR7 435 aaPredicted RBP17.66■□□□□ 0.42
NCSTN-214ENST00000491390 TRIM52Q96A61 297 aa17.66■□□□□ 0.42
NCSTN-214ENST00000491390 RBM33Q96EV2 1170 aaKnown RBP17.66■□□□□ 0.42
NCSTN-214ENST00000491390 SHPRHQ149N8 1683 aa17.66■□□□□ 0.42
NCSTN-214ENST00000491390 MSH6P52701 1360 aa17.66■□□□□ 0.42
NCSTN-214ENST00000491390 EFCAB6Q5THR3 1501 aa17.65■□□□□ 0.42
NCSTN-214ENST00000491390 AHDC1Q5TGY3 1603 aaPredicted RBP17.64■□□□□ 0.41
NCSTN-214ENST00000491390 TSPY4P0CV99 314 aa17.63■□□□□ 0.41
NCSTN-214ENST00000491390 TSPY10P0CW01 314 aa17.63■□□□□ 0.41
NCSTN-214ENST00000491390 KANK4Q5T7N3 995 aaPredicted RBP17.63■□□□□ 0.41
NCSTN-214ENST00000491390 CFAP65Q6ZU64 1925 aaKnown RBP17.62■□□□□ 0.41
NCSTN-214ENST00000491390 SLC26A8Q96RN1 970 aa17.61■□□□□ 0.41
NCSTN-214ENST00000491390 RXRBP28702 533 aa17.6■□□□□ 0.41
NCSTN-214ENST00000491390 VPS8Q8N3P4 1428 aa17.6■□□□□ 0.41
NCSTN-214ENST00000491390 DIP2AQ14689 1571 aa17.6■□□□□ 0.41
NCSTN-214ENST00000491390 DUOX2Q9NRD8 1548 aa17.59■□□□□ 0.41
NCSTN-214ENST00000491390 NCOA3Q9Y6Q9 1424 aa17.57■□□□□ 0.4
NCSTN-214ENST00000491390 RGS12O14924 1447 aa17.56■□□□□ 0.4
Retrieved 100 of 20,778 RNA–protein pairs in 11.7 ms