RNA–Protein interactions for RNA: ENST00000491362.1

USP30-207, Transcript of ubiquitin specific peptidase 30, humanhuman

TSL 2

Gene USP30, Length 745 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP30-207ENST00000491362 NCOA1Q15788 1441 aa13.52□□□□□ -0.25
USP30-207ENST00000491362 CAMSAP2Q08AD1 1489 aa13.52□□□□□ -0.25
USP30-207ENST00000491362 MIA2Q96PC5 1412 aa13.5□□□□□ -0.25
USP30-207ENST00000491362 LOC105371045A0A1W2PR82 267 aa13.5□□□□□ -0.25
USP30-207ENST00000491362 GGT6Q6P531 493 aa13.5□□□□□ -0.25
USP30-207ENST00000491362 CLTCQ00610 1675 aaKnown RBP13.49□□□□□ -0.25
USP30-207ENST00000491362 PLA2R1Q13018 1463 aa13.48□□□□□ -0.25
USP30-207ENST00000491362 ZNF142P52746 1687 aaPredicted RBP13.48□□□□□ -0.25
USP30-207ENST00000491362 TSPY4P0CV99 314 aa13.48□□□□□ -0.25
USP30-207ENST00000491362 TSPY10P0CW01 314 aa13.48□□□□□ -0.25
USP30-207ENST00000491362 MAPK8IP2Q13387 824 aaPredicted RBP13.48□□□□□ -0.25
USP30-207ENST00000491362 MAST1Q9Y2H9 1570 aa13.46□□□□□ -0.25
USP30-207ENST00000491362 PKD2Q13563 968 aa13.46□□□□□ -0.25
USP30-207ENST00000491362 IQSEC2Q5JU85 1478 aa13.46□□□□□ -0.25
USP30-207ENST00000491362 CAMSAP1Q5T5Y3 1602 aa13.46□□□□□ -0.26
USP30-207ENST00000491362 KIF3BO15066 747 aa13.45□□□□□ -0.26
USP30-207ENST00000491362 KANK4Q5T7N3 995 aaPredicted RBP13.45□□□□□ -0.26
USP30-207ENST00000491362 MYO3AQ8NEV4 1616 aa13.45□□□□□ -0.26
USP30-207ENST00000491362 MYOM3Q5VTT5 1437 aa13.45□□□□□ -0.26
USP30-207ENST00000491362 CEP170BQ9Y4F5 1589 aaPredicted RBP13.45□□□□□ -0.26
USP30-207ENST00000491362 KDM5DQ9BY66 1539 aa13.44□□□□□ -0.26
USP30-207ENST00000491362 TCOF1Q13428 1488 aaKnown RBP13.44□□□□□ -0.26
USP30-207ENST00000491362 LTBP4Q8N2S1 1624 aa13.44□□□□□ -0.26
USP30-207ENST00000491362 A2ML1A8K2U0 1454 aa13.43□□□□□ -0.26
USP30-207ENST00000491362 PZPP20742 1482 aa13.43□□□□□ -0.26
USP30-207ENST00000491362 WASHC2CQ9Y4E1 1318 aa13.41□□□□□ -0.26
USP30-207ENST00000491362 ZBTB22O15209 634 aa13.41□□□□□ -0.26
USP30-207ENST00000491362 RNF17Q9BXT8 1623 aaKnown RBP13.4□□□□□ -0.26
USP30-207ENST00000491362 EIF2AK4Q9P2K8 1649 aaKnown RBP13.4□□□□□ -0.26
USP30-207ENST00000491362 TNRQ92752 1358 aa13.4□□□□□ -0.26
USP30-207ENST00000491362 DNMT1P26358 1616 aaKnown RBP13.39□□□□□ -0.27
USP30-207ENST00000491362 NLRP1Q9C000 1473 aa13.38□□□□□ -0.27
USP30-207ENST00000491362 SHANK2Q9UPX8 1470 aa13.38□□□□□ -0.27
USP30-207ENST00000491362 NCKAP5LQ9HCH0 1330 aa13.38□□□□□ -0.27
USP30-207ENST00000491362 ZC3H13Q5T200 1668 aaKnown RBP13.37□□□□□ -0.27
USP30-207ENST00000491362 FBXO31Q5XUX0 539 aaPredicted RBP13.37□□□□□ -0.27
USP30-207ENST00000491362 DUOX2Q9NRD8 1548 aa13.37□□□□□ -0.27
USP30-207ENST00000491362 APLP2Q06481 763 aa13.36□□□□□ -0.27
USP30-207ENST00000491362 ABCC3O15438 1527 aa13.35□□□□□ -0.27
USP30-207ENST00000491362 THEMISQ8N1K5 641 aaPredicted RBP13.35□□□□□ -0.27
USP30-207ENST00000491362 SPATA31D1Q6ZQQ2 1576 aa13.34□□□□□ -0.27
USP30-207ENST00000491362 ABCC5O15440 1437 aa13.34□□□□□ -0.27
USP30-207ENST00000491362 ERBINQ96RT1 1412 aa13.34□□□□□ -0.27
USP30-207ENST00000491362 MROH1Q8NDA8 1641 aa13.34□□□□□ -0.27
USP30-207ENST00000491362 ARHGAP31Q2M1Z3 1444 aa13.33□□□□□ -0.28
USP30-207ENST00000491362 RNF216Q9NWF9 866 aaPredicted RBP13.33□□□□□ -0.28
USP30-207ENST00000491362 MED14O60244 1454 aa13.33□□□□□ -0.28
USP30-207ENST00000491362 PTPN23Q9H3S7 1636 aa13.32□□□□□ -0.28
USP30-207ENST00000491362 FGD6Q6ZV73 1430 aa13.32□□□□□ -0.28
USP30-207ENST00000491362 ZNF335Q9H4Z2 1342 aaPredicted RBP13.32□□□□□ -0.28
USP30-207ENST00000491362 DAPK1P53355 1430 aa13.31□□□□□ -0.28
USP30-207ENST00000491362 PRDM15P57071 1507 aaPredicted RBP13.31□□□□□ -0.28
USP30-207ENST00000491362 ANKLE2Q86XL3 938 aa13.31□□□□□ -0.28
USP30-207ENST00000491362 NEURL4Q96JN8 1562 aa13.31□□□□□ -0.28
USP30-207ENST00000491362 UGGT1Q9NYU2 1555 aa13.31□□□□□ -0.28
USP30-207ENST00000491362 DEPDC5O75140 1603 aa13.31□□□□□ -0.28
USP30-207ENST00000491362 KIF15Q9NS87 1388 aa13.31□□□□□ -0.28
USP30-207ENST00000491362 CROCC2H7BZ55 1655 aa13.31□□□□□ -0.28
USP30-207ENST00000491362 ERVK-7P63135 1459 aa13.3□□□□□ -0.28
USP30-207ENST00000491362 POLR1AO95602 1720 aaPredicted RBP13.29□□□□□ -0.28
USP30-207ENST00000491362 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP13.29□□□□□ -0.28
USP30-207ENST00000491362 CPS1P31327 1500 aa13.29□□□□□ -0.28
USP30-207ENST00000491362 ANKRD30AQ9BXX3 1397 aa13.27□□□□□ -0.29
USP30-207ENST00000491362 NPHP4O75161 1426 aaPredicted RBP13.26□□□□□ -0.29
USP30-207ENST00000491362 ADGRL2O95490 1459 aa13.26□□□□□ -0.29
USP30-207ENST00000491362 LMTK2Q8IWU2 1503 aa13.26□□□□□ -0.29
USP30-207ENST00000491362 RRP7BPQ9NSQ0 103 aa13.26□□□□□ -0.29
USP30-207ENST00000491362 FOXD4L1Q9NU39 408 aa13.26□□□□□ -0.29
USP30-207ENST00000491362 VWDEQ8N2E2 1590 aa13.25□□□□□ -0.29
USP30-207ENST00000491362 KANK1Q14678 1352 aa13.24□□□□□ -0.29
USP30-207ENST00000491362 ARHGAP23Q9P227 1491 aa13.23□□□□□ -0.29
USP30-207ENST00000491362 CEP152O94986 1710 aa13.23□□□□□ -0.29
USP30-207ENST00000491362 SLIT1O75093 1534 aa13.23□□□□□ -0.29
USP30-207ENST00000491362 UBAP1LF5GYI3 381 aa13.22□□□□□ -0.29
USP30-207ENST00000491362 UBR1Q8IWV7 1749 aa13.22□□□□□ -0.29
USP30-207ENST00000491362 KDM5AP29375 1690 aaKnown RBP13.21□□□□□ -0.3
USP30-207ENST00000491362 IQGAP1P46940 1657 aa13.21□□□□□ -0.3
USP30-207ENST00000491362 SCAF11Q99590 1463 aaKnown RBP13.19□□□□□ -0.3
USP30-207ENST00000491362 NOS1P29475 1434 aa13.19□□□□□ -0.3
USP30-207ENST00000491362 RPRD2Q5VT52 1461 aaKnown RBP13.18□□□□□ -0.3
USP30-207ENST00000491362 TOM1O60784 492 aa13.18□□□□□ -0.3
USP30-207ENST00000491362 ANKRD50Q9ULJ7 1429 aa13.17□□□□□ -0.3
USP30-207ENST00000491362 GRWD1Q9BQ67 446 aaKnown RBP eCLIP13.17□□□□□ -0.3
USP30-207ENST00000491362 CHIC2Q9UKJ5 165 aa13.17□□□□□ -0.3
USP30-207ENST00000491362 EFCAB6Q5THR3 1501 aa13.17□□□□□ -0.3
USP30-207ENST00000491362 TMEM2Q9UHN6 1383 aa13.17□□□□□ -0.3
USP30-207ENST00000491362 LTKP29376 864 aa13.16□□□□□ -0.3
USP30-207ENST00000491362 TXNDC2Q86VQ3 553 aa13.16□□□□□ -0.3
USP30-207ENST00000491362 SLC52A1Q9NWF4 448 aa13.16□□□□□ -0.3
USP30-207ENST00000491362 ROCK1Q13464 1354 aa13.16□□□□□ -0.3
USP30-207ENST00000491362 DISP3Q9P2K9 1392 aa13.16□□□□□ -0.3
USP30-207ENST00000491362 IDI1Q13907 227 aa13.15□□□□□ -0.3
USP30-207ENST00000491362 EID1Q9Y6B2 187 aa13.15□□□□□ -0.3
USP30-207ENST00000491362 SYNMO15061 1565 aa13.15□□□□□ -0.3
USP30-207ENST00000491362 LRRC7Q96NW7 1537 aa13.14□□□□□ -0.31
USP30-207ENST00000491362 PIK3C2BO00750 1634 aa13.14□□□□□ -0.31
USP30-207ENST00000491362 FAM50AQ14320 339 aaKnown RBP13.14□□□□□ -0.31
USP30-207ENST00000491362 HOXD11P31277 338 aaPredicted RBP13.12□□□□□ -0.31
USP30-207ENST00000491362 ALKQ9UM73 1620 aa13.12□□□□□ -0.31
USP30-207ENST00000491362 STRCP1A6NGW2 1772 aa13.12□□□□□ -0.31
Retrieved 100 of 20,778 RNA–protein pairs in 45.5 ms