RNA–Protein interactions for RNA: ENST00000491295.1

GGA1-223, Transcript of golgi associated, gamma adaptin ear containing, ARF binding protein 1, human

TSL 4

Gene GGA1, Length 594 nt, Biotype retained intron.

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
GGA1-223	ENST00000491295	MIA2	Q96PC5	1412 aa		28.28	■■■□□ 2.12
GGA1-223	ENST00000491295	WASHC2C	Q9Y4E1	1318 aa		28.28	■■■□□ 2.12
GGA1-223	ENST00000491295	KANK4	Q5T7N3	995 aa	Predicted RBP	28.27	■■■□□ 2.12
GGA1-223	ENST00000491295	KDM5D	Q9BY66	1539 aa		28.26	■■■□□ 2.11
GGA1-223	ENST00000491295	NCKAP5L	Q9HCH0	1330 aa		28.25	■■■□□ 2.11
GGA1-223	ENST00000491295	IQSEC2	Q5JU85	1478 aa		28.25	■■■□□ 2.11
GGA1-223	ENST00000491295	LTBP4	Q8N2S1	1624 aa		28.25	■■■□□ 2.11
GGA1-223	ENST00000491295	A2ML1	A8K2U0	1454 aa		28.23	■■■□□ 2.11
GGA1-223	ENST00000491295	TCOF1	Q13428	1488 aa	Known RBP	28.23	■■■□□ 2.11
GGA1-223	ENST00000491295	MYOM3	Q5VTT5	1437 aa		28.23	■■■□□ 2.11
GGA1-223	ENST00000491295	PZP	P20742	1482 aa		28.22	■■■□□ 2.11
GGA1-223	ENST00000491295	MAST1	Q9Y2H9	1570 aa		28.22	■■■□□ 2.11
GGA1-223	ENST00000491295	APLP2	Q06481	763 aa		28.21	■■■□□ 2.11
GGA1-223	ENST00000491295	TNR	Q92752	1358 aa		28.2	■■■□□ 2.1
GGA1-223	ENST00000491295	FBXO31	Q5XUX0	539 aa	Predicted RBP	28.19	■■■□□ 2.1
GGA1-223	ENST00000491295	DNMT1	P26358	1616 aa	Known RBP	28.17	■■■□□ 2.1
GGA1-223	ENST00000491295	RNF17	Q9BXT8	1623 aa	Known RBP	28.12	■■■□□ 2.09
GGA1-223	ENST00000491295	EIF2AK4	Q9P2K8	1649 aa	Known RBP	28.12	■■■□□ 2.09
GGA1-223	ENST00000491295	THEMIS	Q8N1K5	641 aa	Predicted RBP	28.12	■■■□□ 2.09
GGA1-223	ENST00000491295	NLRP1	Q9C000	1473 aa		28.11	■■■□□ 2.09
GGA1-223	ENST00000491295	ZNF335	Q9H4Z2	1342 aa	Predicted RBP	28.11	■■■□□ 2.09
GGA1-223	ENST00000491295	ZC3H13	Q5T200	1668 aa	Known RBP	28.08	■■■□□ 2.09
GGA1-223	ENST00000491295	DUOX2	Q9NRD8	1548 aa		28.08	■■■□□ 2.08
GGA1-223	ENST00000491295	ANKLE2	Q86XL3	938 aa		28.07	■■■□□ 2.08
GGA1-223	ENST00000491295	ABCC3	O15438	1527 aa		28.05	■■■□□ 2.08
GGA1-223	ENST00000491295	SHANK2	Q9UPX8	1470 aa		28.04	■■■□□ 2.08
GGA1-223	ENST00000491295	UGGT1	Q9NYU2	1555 aa		28.02	■■■□□ 2.08
GGA1-223	ENST00000491295	ABCC5	O15440	1437 aa		28.01	■■■□□ 2.08
GGA1-223	ENST00000491295	POLR1A	O95602	1720 aa	Predicted RBP	28.01	■■■□□ 2.07
GGA1-223	ENST00000491295	PTPN23	Q9H3S7	1636 aa		28.01	■■■□□ 2.07
GGA1-223	ENST00000491295	DROSHA	Q9NRR4	1374 aa	Known RBP eCLIP	28	■■■□□ 2.07
GGA1-223	ENST00000491295	KIF15	Q9NS87	1388 aa		28	■■■□□ 2.07
GGA1-223	ENST00000491295	SPATA31D1	Q6ZQQ2	1576 aa		28	■■■□□ 2.07
GGA1-223	ENST00000491295	ERBIN	Q96RT1	1412 aa		27.99	■■■□□ 2.07
GGA1-223	ENST00000491295	MROH1	Q8NDA8	1641 aa		27.98	■■■□□ 2.07
GGA1-223	ENST00000491295	RRP7BP	Q9NSQ0	103 aa		27.97	■■■□□ 2.07
GGA1-223	ENST00000491295	FGD6	Q6ZV73	1430 aa		27.97	■■■□□ 2.07
GGA1-223	ENST00000491295	NEURL4	Q96JN8	1562 aa		27.97	■■■□□ 2.07
GGA1-223	ENST00000491295	UBAP1L	F5GYI3	381 aa		27.96	■■■□□ 2.07
GGA1-223	ENST00000491295	MED14	O60244	1454 aa		27.95	■■■□□ 2.07
GGA1-223	ENST00000491295	ERVK-7	P63135	1459 aa		27.95	■■■□□ 2.07
GGA1-223	ENST00000491295	DAPK1	P53355	1430 aa		27.95	■■■□□ 2.07
GGA1-223	ENST00000491295	CROCC2	H7BZ55	1655 aa		27.95	■■■□□ 2.07
GGA1-223	ENST00000491295	DEPDC5	O75140	1603 aa		27.95	■■■□□ 2.06
GGA1-223	ENST00000491295	ARHGAP31	Q2M1Z3	1444 aa		27.93	■■■□□ 2.06
GGA1-223	ENST00000491295	CPS1	P31327	1500 aa		27.93	■■■□□ 2.06
GGA1-223	ENST00000491295	ANKRD30A	Q9BXX3	1397 aa		27.91	■■■□□ 2.06
GGA1-223	ENST00000491295	PRDM15	P57071	1507 aa	Predicted RBP	27.91	■■■□□ 2.06
GGA1-223	ENST00000491295	NPHP4	O75161	1426 aa	Predicted RBP	27.91	■■■□□ 2.06
GGA1-223	ENST00000491295	CEP152	O94986	1710 aa		27.89	■■■□□ 2.06
GGA1-223	ENST00000491295	KANK1	Q14678	1352 aa		27.89	■■■□□ 2.06
GGA1-223	ENST00000491295	DISP3	Q9P2K9	1392 aa		27.87	■■■□□ 2.05
GGA1-223	ENST00000491295	GRWD1	Q9BQ67	446 aa	Known RBP eCLIP	27.85	■■■□□ 2.05	9e-13	■□□□□ 11.2
GGA1-223	ENST00000491295	TOM1	O60784	492 aa		27.84	■■■□□ 2.05
GGA1-223	ENST00000491295	CFAP65	Q6ZU64	1925 aa	Known RBP	27.82	■■■□□ 2.04
GGA1-223	ENST00000491295	VWDE	Q8N2E2	1590 aa		27.82	■■■□□ 2.04
GGA1-223	ENST00000491295	CHIC2	Q9UKJ5	165 aa		27.82	■■■□□ 2.04
GGA1-223	ENST00000491295	IQGAP1	P46940	1657 aa		27.81	■■■□□ 2.04
GGA1-223	ENST00000491295	UBR1	Q8IWV7	1749 aa		27.8	■■■□□ 2.04
GGA1-223	ENST00000491295	LMTK2	Q8IWU2	1503 aa		27.78	■■■□□ 2.04
GGA1-223	ENST00000491295	ADGRL2	O95490	1459 aa		27.77	■■■□□ 2.04
GGA1-223	ENST00000491295	SCAF11	Q99590	1463 aa	Known RBP	27.76	■■■□□ 2.04
GGA1-223	ENST00000491295	TXNDC2	Q86VQ3	553 aa		27.76	■■■□□ 2.03
GGA1-223	ENST00000491295	EID1	Q9Y6B2	187 aa		27.76	■■■□□ 2.03
GGA1-223	ENST00000491295	SLIT1	O75093	1534 aa		27.76	■■■□□ 2.03
GGA1-223	ENST00000491295	ARHGAP23	Q9P227	1491 aa		27.76	■■■□□ 2.03
GGA1-223	ENST00000491295	FAM50A	Q14320	339 aa	Known RBP	27.74	■■■□□ 2.03
GGA1-223	ENST00000491295	LTK	P29376	864 aa		27.72	■■■□□ 2.03
GGA1-223	ENST00000491295	STAG3	Q9UJ98	1225 aa		27.72	■■■□□ 2.03
GGA1-223	ENST00000491295	KDM5A	P29375	1690 aa	Known RBP	27.69	■■■□□ 2.02
GGA1-223	ENST00000491295	PIP4K2B	P78356	416 aa		27.69	■■■□□ 2.02
GGA1-223	ENST00000491295	TMEM2	Q9UHN6	1383 aa		27.69	■■■□□ 2.02
GGA1-223	ENST00000491295	SCAF1	Q9H7N4	1312 aa	Known RBP	27.68	■■■□□ 2.02
GGA1-223	ENST00000491295	IDI1	Q13907	227 aa		27.68	■■■□□ 2.02
GGA1-223	ENST00000491295	ANKRD50	Q9ULJ7	1429 aa		27.67	■■■□□ 2.02
GGA1-223	ENST00000491295	ILDR2	Q71H61	639 aa		27.67	■■■□□ 2.02
GGA1-223	ENST00000491295	PIK3C2B	O00750	1634 aa		27.67	■■■□□ 2.02
GGA1-223	ENST00000491295	SLC52A1	Q9NWF4	448 aa		27.66	■■■□□ 2.02
GGA1-223	ENST00000491295	LRRC7	Q96NW7	1537 aa		27.66	■■■□□ 2.02
GGA1-223	ENST00000491295	NOS1	P29475	1434 aa		27.65	■■■□□ 2.02
GGA1-223	ENST00000491295	EFCAB6	Q5THR3	1501 aa		27.64	■■■□□ 2.02
GGA1-223	ENST00000491295	HSPA1L	P34931	641 aa		27.64	■■■□□ 2.02
GGA1-223	ENST00000491295	SYNM	O15061	1565 aa		27.64	■■■□□ 2.01
GGA1-223	ENST00000491295	RPRD2	Q5VT52	1461 aa	Known RBP	27.63	■■■□□ 2.01
GGA1-223	ENST00000491295	STRCP1	A6NGW2	1772 aa		27.62	■■■□□ 2.01
GGA1-223	ENST00000491295	SOCS7	O14512	581 aa		27.6	■■■□□ 2.01
GGA1-223	ENST00000491295	ROCK1	Q13464	1354 aa		27.57	■■■□□ 2
GGA1-223	ENST00000491295	ALK	Q9UM73	1620 aa		27.56	■■■□□ 2
GGA1-223	ENST00000491295	ADGRB3	O60242	1522 aa		27.53	■■■□□ 2
GGA1-223	ENST00000491295	HDGF	P51858	240 aa	Known RBP	27.53	■■■□□ 2
GGA1-223	ENST00000491295	TET3	O43151	1660 aa		27.52	■■■□□ 2
GGA1-223	ENST00000491295	KCNA6	P17658	529 aa		27.5	■■□□□ 1.99
GGA1-223	ENST00000491295	UNC13B	O14795	1591 aa		27.48	■■□□□ 1.99
GGA1-223	ENST00000491295	GCC2	Q8IWJ2	1684 aa		27.46	■■□□□ 1.99
GGA1-223	ENST00000491295	SLC26A8	Q96RN1	970 aa		27.45	■■□□□ 1.98
GGA1-223	ENST00000491295	BCAN	Q96GW7	911 aa		27.42	■■□□□ 1.98
GGA1-223	ENST00000491295	XIRP1	Q702N8	1843 aa	Known RBP	27.41	■■□□□ 1.98
GGA1-223	ENST00000491295	MED1	Q15648	1581 aa	Predicted RBP	27.41	■■□□□ 1.98
GGA1-223	ENST00000491295	ABCF1	Q8NE71	845 aa	Known RBP eCLIP	27.41	■■□□□ 1.98
GGA1-223	ENST00000491295	ZFYVE9	O95405	1425 aa		27.41	■■□□□ 1.98

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