RNA–Protein interactions for RNA: ENST00000491128.5

SMPD4-219, Transcript of sphingomyelin phosphodiesterase 4, humanhuman

TSL 1 (best)

Gene SMPD4, Length 2,570 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMPD4-219ENST00000491128 YEATS2Q9ULM3 1422 aa19.95■□□□□ 0.78
SMPD4-219ENST00000491128 TRHP20396 242 aaPredicted RBP19.94■□□□□ 0.78
SMPD4-219ENST00000491128 CFAP74Q9C0B2 1584 aa19.94■□□□□ 0.78
SMPD4-219ENST00000491128 KDM5DQ9BY66 1539 aa19.94■□□□□ 0.78
SMPD4-219ENST00000491128 RGL3Q3MIN7 710 aa19.93■□□□□ 0.78
SMPD4-219ENST00000491128 KDM2AQ9Y2K7 1162 aa19.92■□□□□ 0.78
SMPD4-219ENST00000491128 NBPF8Q3BBV2 869 aa19.92■□□□□ 0.78
SMPD4-219ENST00000491128 KDM5CP41229 1560 aa19.92■□□□□ 0.78
SMPD4-219ENST00000491128 A2MP01023 1474 aa19.92■□□□□ 0.78
SMPD4-219ENST00000491128 UNC13BO14795 1591 aa19.91■□□□□ 0.78
SMPD4-219ENST00000491128 MLH3Q9UHC1 1453 aa19.91■□□□□ 0.78
SMPD4-219ENST00000491128 COL17A1Q9UMD9 1497 aaPredicted RBP19.89■□□□□ 0.78
SMPD4-219ENST00000491128 PLA2R1Q13018 1463 aa19.89■□□□□ 0.77
SMPD4-219ENST00000491128 PPRC1Q5VV67 1664 aaKnown RBP19.89■□□□□ 0.77
SMPD4-219ENST00000491128 HECW2Q9P2P5 1572 aa19.89■□□□□ 0.77
SMPD4-219ENST00000491128 ABCA6Q8N139 1617 aa19.86■□□□□ 0.77
SMPD4-219ENST00000491128 MAGI2Q86UL8 1455 aa19.86■□□□□ 0.77
SMPD4-219ENST00000491128 KIF13AQ9H1H9 1805 aa19.86■□□□□ 0.77
SMPD4-219ENST00000491128 FRMPD1Q5SYB0 1578 aa19.86■□□□□ 0.77
SMPD4-219ENST00000491128 DCAF11Q8TEB1 546 aa19.86■□□□□ 0.77
SMPD4-219ENST00000491128 TEX14Q8IWB6 1497 aa19.86■□□□□ 0.77
SMPD4-219ENST00000491128 DNAJC5Q9H3Z4 198 aa19.85■□□□□ 0.77
SMPD4-219ENST00000491128 IQGAP3Q86VI3 1631 aa19.85■□□□□ 0.77
SMPD4-219ENST00000491128 KANK1Q14678 1352 aa19.84■□□□□ 0.77
SMPD4-219ENST00000491128 CCDC144AA2RUR9 1427 aa19.84■□□□□ 0.77
SMPD4-219ENST00000491128 RICTORQ6R327 1708 aa19.84■□□□□ 0.77
SMPD4-219ENST00000491128 MLECQ14165 292 aa19.83■□□□□ 0.76
SMPD4-219ENST00000491128 WASHC2CQ9Y4E1 1318 aa19.82■□□□□ 0.76
SMPD4-219ENST00000491128 DIP2CQ9Y2E4 1556 aa19.81■□□□□ 0.76
SMPD4-219ENST00000491128 MROH1Q8NDA8 1641 aa19.8■□□□□ 0.76
SMPD4-219ENST00000491128 DEPDC5O75140 1603 aa19.76■□□□□ 0.75
SMPD4-219ENST00000491128 E9PCH4 1651 aa19.76■□□□□ 0.75
SMPD4-219ENST00000491128 HSPA5P11021 654 aaKnown RBP19.76■□□□□ 0.75
SMPD4-219ENST00000491128 ATP10AO60312 1499 aa19.75■□□□□ 0.75
SMPD4-219ENST00000491128 PRDM15P57071 1507 aaPredicted RBP19.75■□□□□ 0.75
SMPD4-219ENST00000491128 UGGT1Q9NYU2 1555 aa19.73■□□□□ 0.75
SMPD4-219ENST00000491128 EIF2AK4Q9P2K8 1649 aaKnown RBP19.73■□□□□ 0.75
SMPD4-219ENST00000491128 CHGAP10645 457 aaKnown RBP19.73■□□□□ 0.75
SMPD4-219ENST00000491128 DDX10Q13206 875 aaKnown RBP19.73■□□□□ 0.75
SMPD4-219ENST00000491128 VWDEQ8N2E2 1590 aa19.73■□□□□ 0.75
SMPD4-219ENST00000491128 MIER1Q8N108 512 aa19.72■□□□□ 0.75
SMPD4-219ENST00000491128 CEP152O94986 1710 aa19.7■□□□□ 0.74
SMPD4-219ENST00000491128 EIF4G2P78344 907 aaKnown RBP eCLIP19.69■□□□□ 0.74
SMPD4-219ENST00000491128 CFAP65Q6ZU64 1925 aaKnown RBP19.69■□□□□ 0.74
SMPD4-219ENST00000491128 NPATQ14207 1427 aa19.69■□□□□ 0.74
SMPD4-219ENST00000491128 SENP3Q9H4L4 574 aaPredicted RBP19.69■□□□□ 0.74
SMPD4-219ENST00000491128 ARID4BQ4LE39 1312 aaPredicted RBP19.68■□□□□ 0.74
SMPD4-219ENST00000491128 ZMYM4Q5VZL5 1548 aa19.68■□□□□ 0.74
SMPD4-219ENST00000491128 TET3O43151 1660 aa19.68■□□□□ 0.74
SMPD4-219ENST00000491128 NBPF1Q3BBV0 1214 aa19.67■□□□□ 0.74
SMPD4-219ENST00000491128 FBXO31Q5XUX0 539 aaPredicted RBP19.67■□□□□ 0.74
SMPD4-219ENST00000491128 PTPRTO14522 1441 aa19.67■□□□□ 0.74
SMPD4-219ENST00000491128 RNF17Q9BXT8 1623 aaKnown RBP19.66■□□□□ 0.74
SMPD4-219ENST00000491128 ABCC3O15438 1527 aa19.66■□□□□ 0.74
SMPD4-219ENST00000491128 EFCAB6Q5THR3 1501 aa19.66■□□□□ 0.74
SMPD4-219ENST00000491128 C11orf95C9JLR9 678 aaPredicted RBP19.65■□□□□ 0.74
SMPD4-219ENST00000491128 CARD11Q9BXL7 1154 aa19.65■□□□□ 0.74
SMPD4-219ENST00000491128 SIGLEC1Q9BZZ2 1709 aa19.64■□□□□ 0.73
SMPD4-219ENST00000491128 NUTM2DQ5VT03 806 aaPredicted RBP19.63■□□□□ 0.73
SMPD4-219ENST00000491128 CLTCL1P53675 1640 aa19.63■□□□□ 0.73
SMPD4-219ENST00000491128 TRPM2O94759 1503 aa19.63■□□□□ 0.73
SMPD4-219ENST00000491128 SPATA31E1Q6ZUB1 1445 aa19.63■□□□□ 0.73
SMPD4-219ENST00000491128 SPHKAPQ2M3C7 1700 aa19.61■□□□□ 0.73
SMPD4-219ENST00000491128 PLPPR3Q6T4P5 718 aa19.61■□□□□ 0.73
SMPD4-219ENST00000491128 LMTK2Q8IWU2 1503 aa19.6■□□□□ 0.73
SMPD4-219ENST00000491128 POLR3GLQ9BT43 218 aa19.6■□□□□ 0.73
SMPD4-219ENST00000491128 ROCK2O75116 1388 aaKnown RBP19.59■□□□□ 0.73
SMPD4-219ENST00000491128 PRAG1Q86YV5 1406 aa19.59■□□□□ 0.73
SMPD4-219ENST00000491128 WASHC2AQ641Q2 1341 aa19.58■□□□□ 0.73
SMPD4-219ENST00000491128 UHRF1BP1Q6BDS2 1440 aa19.58■□□□□ 0.73
SMPD4-219ENST00000491128 USP47Q96K76 1375 aa19.58■□□□□ 0.72
SMPD4-219ENST00000491128 IDI1Q13907 227 aa19.57■□□□□ 0.72
SMPD4-219ENST00000491128 ST20-MTHFSA0A0A6YYL1 179 aa19.55■□□□□ 0.72
SMPD4-219ENST00000491128 ADGRF5Q8IZF2 1346 aa19.55■□□□□ 0.72
SMPD4-219ENST00000491128 BCORL1Q5H9F3 1711 aa19.54■□□□□ 0.72
SMPD4-219ENST00000491128 CAMSAP1Q5T5Y3 1602 aa19.54■□□□□ 0.72
SMPD4-219ENST00000491128 ARHGEF40Q8TER5 1519 aa19.54■□□□□ 0.72
SMPD4-219ENST00000491128 ESF1Q9H501 851 aaKnown RBP19.53■□□□□ 0.72
SMPD4-219ENST00000491128 RALGAPBQ86X10 1494 aa19.53■□□□□ 0.72
SMPD4-219ENST00000491128 CFAP70Q5T0N1 1121 aa19.51■□□□□ 0.71
SMPD4-219ENST00000491128 NOS1P29475 1434 aa19.5■□□□□ 0.71
SMPD4-219ENST00000491128 YTHDC1Q96MU7 727 aaKnown RBP19.5■□□□□ 0.71
SMPD4-219ENST00000491128 CEBPAP49715 358 aaPredicted RBP19.49■□□□□ 0.71
SMPD4-219ENST00000491128 CNGB1Q14028 1251 aaPredicted RBP19.49■□□□□ 0.71
SMPD4-219ENST00000491128 CNTLNQ9NXG0 1405 aa19.49■□□□□ 0.71
SMPD4-219ENST00000491128 AGLP35573 1532 aa19.49■□□□□ 0.71
SMPD4-219ENST00000491128 KIF7Q2M1P5 1343 aa19.48■□□□□ 0.71
SMPD4-219ENST00000491128 SYNMO15061 1565 aa19.48■□□□□ 0.71
SMPD4-219ENST00000491128 MROH2AA6NES4 1674 aa19.46■□□□□ 0.71
SMPD4-219ENST00000491128 ARHGAP31Q2M1Z3 1444 aa19.46■□□□□ 0.71
SMPD4-219ENST00000491128 CLTCQ00610 1675 aaKnown RBP19.46■□□□□ 0.71
SMPD4-219ENST00000491128 REREQ9P2R6 1566 aa19.46■□□□□ 0.71
SMPD4-219ENST00000491128 STAG3Q9UJ98 1225 aa19.45■□□□□ 0.7
SMPD4-219ENST00000491128 ZMYM3Q14202 1370 aa19.45■□□□□ 0.7
SMPD4-219ENST00000491128 CCDC7Q96M83 1385 aa19.44■□□□□ 0.7
SMPD4-219ENST00000491128 TRPM1Q7Z4N2 1603 aa19.43■□□□□ 0.7
SMPD4-219ENST00000491128 TMEM132EQ6IEE7 984 aa19.42■□□□□ 0.7
SMPD4-219ENST00000491128 SLC52A1Q9NWF4 448 aa19.42■□□□□ 0.7
SMPD4-219ENST00000491128 PPP6R1Q9UPN7 881 aa19.41■□□□□ 0.7
SMPD4-219ENST00000491128 ADGRB3O60242 1522 aa19.41■□□□□ 0.7
Retrieved 100 of 20,778 RNA–protein pairs in 32.1 ms