RNA–Protein interactions for RNA: ENST00000490910.5

CRNKL1-204, Transcript of crooked neck pre-mRNA splicing factor 1, humanhuman

TSL 1 (best)

Gene CRNKL1, Length 4,183 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CRNKL1-204ENST00000490910 MCM4P33991 863 aa14.18□□□□□ -0.14
CRNKL1-204ENST00000490910 AMER1Q5JTC6 1135 aaPredicted RBP14.18□□□□□ -0.14
CRNKL1-204ENST00000490910 R3HCC1Q9Y3T6 440 aaKnown RBP14.18□□□□□ -0.14
CRNKL1-204ENST00000490910 IGF1RP08069 1367 aa14.17□□□□□ -0.14
CRNKL1-204ENST00000490910 KIAA1211Q6ZU35 1233 aa14.17□□□□□ -0.14
CRNKL1-204ENST00000490910 MTERF4Q7Z6M4 381 aaKnown RBP14.17□□□□□ -0.14
CRNKL1-204ENST00000490910 PANK3Q9H999 370 aa14.17□□□□□ -0.14
CRNKL1-204ENST00000490910 CLCN1P35523 988 aa14.17□□□□□ -0.14
CRNKL1-204ENST00000490910 RBM10P98175 930 aaKnown RBP14.17□□□□□ -0.14
CRNKL1-204ENST00000490910 CASC1Q6TDU7 716 aa14.16□□□□□ -0.14
CRNKL1-204ENST00000490910 FBLN2P98095 1184 aa14.16□□□□□ -0.14
CRNKL1-204ENST00000490910 PDCL3Q9H2J4 239 aa14.15□□□□□ -0.14
CRNKL1-204ENST00000490910 E9PSI1 815 aa14.15□□□□□ -0.14
CRNKL1-204ENST00000490910 EIF3AQ14152 1382 aaKnown RBP14.15□□□□□ -0.14
CRNKL1-204ENST00000490910 ATAD2BQ9ULI0 1458 aa14.15□□□□□ -0.14
CRNKL1-204ENST00000490910 NASPP49321 788 aaPredicted RBP14.15□□□□□ -0.14
CRNKL1-204ENST00000490910 TPRNQ4KMQ1 711 aa14.15□□□□□ -0.14
CRNKL1-204ENST00000490910 NUP155O75694 1391 aa14.15□□□□□ -0.14
CRNKL1-204ENST00000490910 CSPP1Q1MSJ5 1256 aa14.15□□□□□ -0.14
CRNKL1-204ENST00000490910 C22orf23Q9BZE7 217 aa14.15□□□□□ -0.14
CRNKL1-204ENST00000490910 NAIPQ13075 1403 aa14.14□□□□□ -0.15
CRNKL1-204ENST00000490910 CUX1P39880 1505 aa14.13□□□□□ -0.15
CRNKL1-204ENST00000490910 CHMP4BQ9H444 224 aaKnown RBP14.12□□□□□ -0.15
CRNKL1-204ENST00000490910 CASKIN1Q8WXD9 1431 aa14.12□□□□□ -0.15
CRNKL1-204ENST00000490910 RRAGDQ9NQL2 400 aaPredicted RBP14.12□□□□□ -0.15
CRNKL1-204ENST00000490910 MAP3K1Q13233 1512 aa14.12□□□□□ -0.15
CRNKL1-204ENST00000490910 CCDC173Q0VFZ6 552 aa14.12□□□□□ -0.15
CRNKL1-204ENST00000490910 RNF123Q5XPI4 1314 aa14.11□□□□□ -0.15
CRNKL1-204ENST00000490910 APAF1O14727 1248 aa14.11□□□□□ -0.15
CRNKL1-204ENST00000490910 ITPRIPQ8IWB1 547 aa14.11□□□□□ -0.15
CRNKL1-204ENST00000490910 TOP2BQ02880 1626 aa14.11□□□□□ -0.15
CRNKL1-204ENST00000490910 ADAMTS8Q9UP79 889 aa14.1□□□□□ -0.15
CRNKL1-204ENST00000490910 C20orf194Q5TEA3 1177 aa14.1□□□□□ -0.15
CRNKL1-204ENST00000490910 NCOA2Q15596 1464 aa14.1□□□□□ -0.15
CRNKL1-204ENST00000490910 FYCO1Q9BQS8 1478 aa14.1□□□□□ -0.15
CRNKL1-204ENST00000490910 XRCC6P12956 609 aaKnown RBP eCLIP14.1□□□□□ -0.15
CRNKL1-204ENST00000490910 PLEKHD1A6NEE1 506 aa14.09□□□□□ -0.15
CRNKL1-204ENST00000490910 CFAP44Q96MT7 982 aa14.09□□□□□ -0.15
CRNKL1-204ENST00000490910 CHGAP10645 457 aaKnown RBP14.09□□□□□ -0.15
CRNKL1-204ENST00000490910 SYAP1Q96A49 352 aaPredicted RBP14.09□□□□□ -0.15
CRNKL1-204ENST00000490910 ANKRD30AQ9BXX3 1397 aa14.09□□□□□ -0.15
CRNKL1-204ENST00000490910 MIA2Q96PC5 1412 aa14.08□□□□□ -0.16
CRNKL1-204ENST00000490910 BCL2L13Q9BXK5 485 aa14.08□□□□□ -0.16
CRNKL1-204ENST00000490910 PANK1Q8TE04 598 aa14.08□□□□□ -0.16
CRNKL1-204ENST00000490910 ZSCAN30Q86W11 494 aa14.06□□□□□ -0.16
CRNKL1-204ENST00000490910 IPO8O15397 1037 aaKnown RBP14.06□□□□□ -0.16
CRNKL1-204ENST00000490910 PANK2Q9BZ23 570 aa14.06□□□□□ -0.16
CRNKL1-204ENST00000490910 SLC24A1O60721 1099 aa14.05□□□□□ -0.16
CRNKL1-204ENST00000490910 AAMPQ13685 434 aa14.05□□□□□ -0.16
CRNKL1-204ENST00000490910 MORC1Q86VD1 984 aa14.05□□□□□ -0.16
CRNKL1-204ENST00000490910 SMC4Q9NTJ3 1288 aa14.05□□□□□ -0.16
CRNKL1-204ENST00000490910 C8orf34Q49A92 452 aa14.04□□□□□ -0.16
CRNKL1-204ENST00000490910 NGEFQ8N5V2 710 aa14.04□□□□□ -0.16
CRNKL1-204ENST00000490910 PDE3AQ14432 1141 aa14.04□□□□□ -0.16
CRNKL1-204ENST00000490910 PDZRN3Q9UPQ7 1066 aa14.04□□□□□ -0.16
CRNKL1-204ENST00000490910 TBC1D2Q9BYX2 928 aa14.03□□□□□ -0.16
CRNKL1-204ENST00000490910 UQCRHLA0A096LP55 91 aa14.02□□□□□ -0.16
CRNKL1-204ENST00000490910 BCAR3O75815 825 aa14.02□□□□□ -0.16
CRNKL1-204ENST00000490910 UQCRHP07919 91 aa14.02□□□□□ -0.16
CRNKL1-204ENST00000490910 U2SURPO15042 1029 aaKnown RBP14.02□□□□□ -0.17
CRNKL1-204ENST00000490910 CFTRP13569 1480 aa14.02□□□□□ -0.17
CRNKL1-204ENST00000490910 ZKSCAN2Q63HK3 967 aa14.02□□□□□ -0.17
CRNKL1-204ENST00000490910 ZNF771Q7L3S4 317 aaPredicted RBP14.01□□□□□ -0.17
CRNKL1-204ENST00000490910 RRP7AQ9Y3A4 280 aaKnown RBP14.01□□□□□ -0.17
CRNKL1-204ENST00000490910 CCDC39Q9UFE4 941 aa14□□□□□ -0.17
CRNKL1-204ENST00000490910 PHF14O94880 888 aa14□□□□□ -0.17
CRNKL1-204ENST00000490910 MCTP1Q6DN14 999 aa14□□□□□ -0.17
CRNKL1-204ENST00000490910 DRC7Q8IY82 874 aa13.99□□□□□ -0.17
CRNKL1-204ENST00000490910 PTPN23Q9H3S7 1636 aa13.99□□□□□ -0.17
CRNKL1-204ENST00000490910 ST18O60284 1047 aa13.99□□□□□ -0.17
CRNKL1-204ENST00000490910 NUCB2P80303 420 aa13.99□□□□□ -0.17
CRNKL1-204ENST00000490910 U2AF1L5P0DN76 240 aaPredicted RBP13.98□□□□□ -0.17
CRNKL1-204ENST00000490910 U2AF1Q01081 240 aaKnown RBP eCLIP13.98□□□□□ -0.17
CRNKL1-204ENST00000490910 CAVIN1Q6NZI2 390 aaKnown RBP13.98□□□□□ -0.17
CRNKL1-204ENST00000490910 FGD5Q6ZNL6 1462 aa13.98□□□□□ -0.17
CRNKL1-204ENST00000490910 CIZ1Q9ULV3 898 aaPredicted RBP13.98□□□□□ -0.17
CRNKL1-204ENST00000490910 ANKRD30BQ9BXX2 1392 aa13.97□□□□□ -0.17
CRNKL1-204ENST00000490910 FOXD4L5Q5VV16 416 aaPredicted RBP13.97□□□□□ -0.17
CRNKL1-204ENST00000490910 FOXD4L4Q8WXT5 416 aaPredicted RBP13.97□□□□□ -0.17
CRNKL1-204ENST00000490910 MCCP23508 829 aa13.97□□□□□ -0.17
CRNKL1-204ENST00000490910 PCF11O94913 1555 aaKnown RBP13.97□□□□□ -0.17
CRNKL1-204ENST00000490910 DZIP1LQ8IYY4 767 aaKnown RBP13.97□□□□□ -0.17
CRNKL1-204ENST00000490910 GOLGA6L6A8MZA4 724 aa13.95□□□□□ -0.18
CRNKL1-204ENST00000490910 TNNT3P45378 269 aaPredicted RBP13.95□□□□□ -0.18
CRNKL1-204ENST00000490910 DDX19BQ9UMR2 479 aa13.95□□□□□ -0.18
CRNKL1-204ENST00000490910 HMGN5P82970 282 aaKnown RBP13.95□□□□□ -0.18
CRNKL1-204ENST00000490910 PPP2R1AP30153 589 aa13.95□□□□□ -0.18
CRNKL1-204ENST00000490910 ANKRD45Q5TZF3 282 aa13.95□□□□□ -0.18
CRNKL1-204ENST00000490910 PRDM10Q9NQV6 1147 aa13.95□□□□□ -0.18
CRNKL1-204ENST00000490910 CCDC144AA2RUR9 1427 aa13.95□□□□□ -0.18
CRNKL1-204ENST00000490910 PLEKHH2Q8IVE3 1493 aa13.94□□□□□ -0.18
CRNKL1-204ENST00000490910 ZNF644Q9H582 1327 aaPredicted RBP13.94□□□□□ -0.18
CRNKL1-204ENST00000490910 SLFN5Q08AF3 891 aa13.94□□□□□ -0.18
CRNKL1-204ENST00000490910 TBC1D32Q96NH3 1257 aa13.94□□□□□ -0.18
CRNKL1-204ENST00000490910 NINLQ9Y2I6 1382 aa13.94□□□□□ -0.18
CRNKL1-204ENST00000490910 RNF214Q8ND24 703 aa13.93□□□□□ -0.18
CRNKL1-204ENST00000490910 LNPKQ9C0E8 428 aa13.93□□□□□ -0.18
CRNKL1-204ENST00000490910 EFCAB5A4FU69 1503 aa13.93□□□□□ -0.18
CRNKL1-204ENST00000490910 RPRD2Q5VT52 1461 aaKnown RBP13.93□□□□□ -0.18
CRNKL1-204ENST00000490910 TDRD9Q8NDG6 1382 aaKnown RBP13.93□□□□□ -0.18
Retrieved 100 of 20,778 RNA–protein pairs in 13.7 ms