RNA–Protein interactions for RNA: ENST00000490812.5

PTPN18-215, Transcript of protein tyrosine phosphatase, non-receptor type 18, human

TSL 5

Gene PTPN18, Length 833 nt, Biotype retained intron, Subcellular localisation Cytosol .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
PTPN18-215	ENST00000490812	MYO3A	Q8NEV4	1616 aa		33.24	■■■□□ 2.91
PTPN18-215	ENST00000490812	EIF2AK4	Q9P2K8	1649 aa	Known RBP	33.24	■■■□□ 2.91
PTPN18-215	ENST00000490812	TCOF1	Q13428	1488 aa	Known RBP	33.24	■■■□□ 2.91
PTPN18-215	ENST00000490812	ZNF142	P52746	1687 aa	Predicted RBP	33.23	■■■□□ 2.91
PTPN18-215	ENST00000490812	RNF17	Q9BXT8	1623 aa	Known RBP	33.23	■■■□□ 2.91
PTPN18-215	ENST00000490812	ABCC5	O15440	1437 aa		33.19	■■■□□ 2.9
PTPN18-215	ENST00000490812	DNMT1	P26358	1616 aa	Known RBP	33.19	■■■□□ 2.9
PTPN18-215	ENST00000490812	NCOA1	Q15788	1441 aa		33.19	■■■□□ 2.9
PTPN18-215	ENST00000490812	DUOX2	Q9NRD8	1548 aa		33.18	■■■□□ 2.9
PTPN18-215	ENST00000490812	WASHC2C	Q9Y4E1	1318 aa		33.18	■■■□□ 2.9
PTPN18-215	ENST00000490812	CEP170B	Q9Y4F5	1589 aa	Predicted RBP	33.17	■■■□□ 2.9
PTPN18-215	ENST00000490812	PZP	P20742	1482 aa		33.17	■■■□□ 2.9
PTPN18-215	ENST00000490812	DAPK1	P53355	1430 aa		33.16	■■■□□ 2.9
PTPN18-215	ENST00000490812	PTPRT	O14522	1441 aa		33.15	■■■□□ 2.9
PTPN18-215	ENST00000490812	CAMSAP1	Q5T5Y3	1602 aa		33.15	■■■□□ 2.9
PTPN18-215	ENST00000490812	FBXO41	Q8TF61	875 aa		33.15	■■■□□ 2.9
PTPN18-215	ENST00000490812	ZC3H13	Q5T200	1668 aa	Known RBP	33.14	■■■□□ 2.9
PTPN18-215	ENST00000490812	KIF15	Q9NS87	1388 aa		33.11	■■■□□ 2.89
PTPN18-215	ENST00000490812	MROH1	Q8NDA8	1641 aa		33.1	■■■□□ 2.89
PTPN18-215	ENST00000490812	ABCC3	O15438	1527 aa		33.09	■■■□□ 2.89
PTPN18-215	ENST00000490812	PLA2R1	Q13018	1463 aa		33.09	■■■□□ 2.89
PTPN18-215	ENST00000490812	ERBIN	Q96RT1	1412 aa		33.09	■■■□□ 2.89
PTPN18-215	ENST00000490812	A2ML1	A8K2U0	1454 aa		33.08	■■■□□ 2.89
PTPN18-215	ENST00000490812	TNR	Q92752	1358 aa		33.08	■■■□□ 2.89
PTPN18-215	ENST00000490812	FBXO31	Q5XUX0	539 aa	Predicted RBP	33.04	■■■□□ 2.88
PTPN18-215	ENST00000490812	CERK	Q8TCT0	537 aa		33.03	■■■□□ 2.88
PTPN18-215	ENST00000490812	RRP7BP	Q9NSQ0	103 aa		33.02	■■■□□ 2.88
PTPN18-215	ENST00000490812	ANKRD30A	Q9BXX3	1397 aa		33.01	■■■□□ 2.88
PTPN18-215	ENST00000490812	PRDM15	P57071	1507 aa	Predicted RBP	33.01	■■■□□ 2.87
PTPN18-215	ENST00000490812	PKD2	Q13563	968 aa		32.99	■■■□□ 2.87
PTPN18-215	ENST00000490812	CEP152	O94986	1710 aa		32.99	■■■□□ 2.87
PTPN18-215	ENST00000490812	NLRP1	Q9C000	1473 aa		32.98	■■■□□ 2.87
PTPN18-215	ENST00000490812	DEPDC5	O75140	1603 aa		32.97	■■■□□ 2.87
PTPN18-215	ENST00000490812	ADGRL2	O95490	1459 aa		32.96	■■■□□ 2.87
PTPN18-215	ENST00000490812	SPATA31D1	Q6ZQQ2	1576 aa		32.96	■■■□□ 2.87
PTPN18-215	ENST00000490812	NCKAP5L	Q9HCH0	1330 aa		32.95	■■■□□ 2.86
PTPN18-215	ENST00000490812	FAM50A	Q14320	339 aa	Known RBP	32.93	■■■□□ 2.86
PTPN18-215	ENST00000490812	CHIC2	Q9UKJ5	165 aa		32.93	■■■□□ 2.86
PTPN18-215	ENST00000490812	ERVK-7	P63135	1459 aa		32.91	■■■□□ 2.86
PTPN18-215	ENST00000490812	LTBP4	Q8N2S1	1624 aa		32.88	■■■□□ 2.85
PTPN18-215	ENST00000490812	ARHGAP31	Q2M1Z3	1444 aa		32.88	■■■□□ 2.85
PTPN18-215	ENST00000490812	POLR1A	O95602	1720 aa	Predicted RBP	32.88	■■■□□ 2.85
PTPN18-215	ENST00000490812	UGGT1	Q9NYU2	1555 aa		32.87	■■■□□ 2.85
PTPN18-215	ENST00000490812	KANK1	Q14678	1352 aa		32.86	■■■□□ 2.85
PTPN18-215	ENST00000490812	THEMIS	Q8N1K5	641 aa	Predicted RBP	32.84	■■■□□ 2.85
PTPN18-215	ENST00000490812	VWDE	Q8N2E2	1590 aa		32.83	■■■□□ 2.85
PTPN18-215	ENST00000490812	CFAP65	Q6ZU64	1925 aa	Known RBP	32.82	■■■□□ 2.84
PTPN18-215	ENST00000490812	LMTK2	Q8IWU2	1503 aa		32.82	■■■□□ 2.84
PTPN18-215	ENST00000490812	GRWD1	Q9BQ67	446 aa	Known RBP eCLIP	32.81	■■■□□ 2.84	2e-8	■■■□□ 14.6
PTPN18-215	ENST00000490812	NEURL4	Q96JN8	1562 aa		32.8	■■■□□ 2.84
PTPN18-215	ENST00000490812	IQSEC2	Q5JU85	1478 aa		32.8	■■■□□ 2.84
PTPN18-215	ENST00000490812	DROSHA	Q9NRR4	1374 aa	Known RBP eCLIP	32.78	■■■□□ 2.84
PTPN18-215	ENST00000490812	ANKRD50	Q9ULJ7	1429 aa		32.77	■■■□□ 2.84
PTPN18-215	ENST00000490812	ANKLE2	Q86XL3	938 aa		32.76	■■■□□ 2.83
PTPN18-215	ENST00000490812	ZNF335	Q9H4Z2	1342 aa	Predicted RBP	32.73	■■■□□ 2.83
PTPN18-215	ENST00000490812	UBR1	Q8IWV7	1749 aa		32.72	■■■□□ 2.83
PTPN18-215	ENST00000490812	ROCK1	Q13464	1354 aa		32.71	■■■□□ 2.83
PTPN18-215	ENST00000490812	MED14	O60244	1454 aa		32.71	■■■□□ 2.83
PTPN18-215	ENST00000490812	EFCAB6	Q5THR3	1501 aa		32.7	■■■□□ 2.83
PTPN18-215	ENST00000490812	NPHP4	O75161	1426 aa	Predicted RBP	32.66	■■■□□ 2.82
PTPN18-215	ENST00000490812	PPARGC1B	Q86YN6	1023 aa	Known RBP	32.65	■■■□□ 2.82
PTPN18-215	ENST00000490812	IQGAP1	P46940	1657 aa		32.63	■■■□□ 2.81
PTPN18-215	ENST00000490812	UNC13B	O14795	1591 aa		32.63	■■■□□ 2.81
PTPN18-215	ENST00000490812	KDM5A	P29375	1690 aa	Known RBP	32.62	■■■□□ 2.81
PTPN18-215	ENST00000490812	PIK3C2B	O00750	1634 aa		32.62	■■■□□ 2.81
PTPN18-215	ENST00000490812	SLIT1	O75093	1534 aa		32.61	■■■□□ 2.81
PTPN18-215	ENST00000490812	RPRD2	Q5VT52	1461 aa	Known RBP	32.61	■■■□□ 2.81
PTPN18-215	ENST00000490812	TET3	O43151	1660 aa		32.6	■■■□□ 2.81
PTPN18-215	ENST00000490812	ARHGAP23	Q9P227	1491 aa		32.6	■■■□□ 2.81
PTPN18-215	ENST00000490812	NOS1	P29475	1434 aa		32.6	■■■□□ 2.81
PTPN18-215	ENST00000490812	SYNM	O15061	1565 aa		32.59	■■■□□ 2.81
PTPN18-215	ENST00000490812	CPS1	P31327	1500 aa		32.58	■■■□□ 2.81
PTPN18-215	ENST00000490812	SCAF11	Q99590	1463 aa	Known RBP	32.56	■■■□□ 2.8
PTPN18-215	ENST00000490812	GCC2	Q8IWJ2	1684 aa		32.56	■■■□□ 2.8
PTPN18-215	ENST00000490812	RRBP1	Q9P2E9	1410 aa	Known RBP	32.54	■■■□□ 2.8
PTPN18-215	ENST00000490812	ITGAE	P38570	1179 aa		32.53	■■■□□ 2.8
PTPN18-215	ENST00000490812	IDI1	Q13907	227 aa		32.51	■■■□□ 2.79
PTPN18-215	ENST00000490812	STAG3	Q9UJ98	1225 aa		32.5	■■■□□ 2.79
PTPN18-215	ENST00000490812	IQGAP3	Q86VI3	1631 aa		32.5	■■■□□ 2.79
PTPN18-215	ENST00000490812	TMEM2	Q9UHN6	1383 aa		32.49	■■■□□ 2.79
PTPN18-215	ENST00000490812	SLC52A1	Q9NWF4	448 aa		32.49	■■■□□ 2.79
PTPN18-215	ENST00000490812	ADGRB3	O60242	1522 aa		32.48	■■■□□ 2.79
PTPN18-215	ENST00000490812	EID1	Q9Y6B2	187 aa		32.48	■■■□□ 2.79
PTPN18-215	ENST00000490812	TXNDC2	Q86VQ3	553 aa		32.47	■■■□□ 2.79
PTPN18-215	ENST00000490812	LTK	P29376	864 aa		32.46	■■■□□ 2.79
PTPN18-215	ENST00000490812		E9PCH4	1651 aa		32.43	■■■□□ 2.78
PTPN18-215	ENST00000490812	UBAP1L	F5GYI3	381 aa		32.42	■■■□□ 2.78
PTPN18-215	ENST00000490812	NUP155	O75694	1391 aa		32.4	■■■□□ 2.78
PTPN18-215	ENST00000490812	STRCP1	A6NGW2	1772 aa		32.39	■■■□□ 2.78
PTPN18-215	ENST00000490812	TMEM131L	A2VDJ0	1609 aa		32.33	■■■□□ 2.77
PTPN18-215	ENST00000490812	MYO5B	Q9ULV0	1848 aa		32.32	■■■□□ 2.76
PTPN18-215	ENST00000490812	LRRC7	Q96NW7	1537 aa		32.31	■■■□□ 2.76
PTPN18-215	ENST00000490812	NAIP	Q13075	1403 aa		32.29	■■■□□ 2.76
PTPN18-215	ENST00000490812	TOM1	O60784	492 aa		32.29	■■■□□ 2.76
PTPN18-215	ENST00000490812	ZFYVE9	O95405	1425 aa		32.27	■■■□□ 2.76
PTPN18-215	ENST00000490812	HDGF	P51858	240 aa	Known RBP	32.23	■■■□□ 2.75
PTPN18-215	ENST00000490812	HFM1	A2PYH4	1435 aa		32.23	■■■□□ 2.75
PTPN18-215	ENST00000490812	RIMS2	Q9UQ26	1411 aa		32.22	■■■□□ 2.75
PTPN18-215	ENST00000490812	SPHKAP	Q2M3C7	1700 aa		32.21	■■■□□ 2.75
PTPN18-215	ENST00000490812	PLEKHG1	Q9ULL1	1385 aa		32.19	■■■□□ 2.74

Retrieved 100 of 20,778 RNA–protein pairs in 62.8 ms