RNA–Protein interactions for RNA: ENST00000490796.1

SREBF1-216, Transcript of sterol regulatory element binding transcription factor 1, humanhuman

TSL 2

Gene SREBF1, Length 698 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SREBF1-216ENST00000490796 PKD2Q13563 968 aa30.96■■■□□ 2.55
SREBF1-216ENST00000490796 MYOM3Q5VTT5 1437 aa30.95■■■□□ 2.54
SREBF1-216ENST00000490796 MIA2Q96PC5 1412 aa30.95■■■□□ 2.54
SREBF1-216ENST00000490796 KDM5DQ9BY66 1539 aa30.94■■■□□ 2.54
SREBF1-216ENST00000490796 ZNF142P52746 1687 aaPredicted RBP30.93■■■□□ 2.54
SREBF1-216ENST00000490796 FAM135AQ9P2D6 1515 aa30.93■■■□□ 2.54
SREBF1-216ENST00000490796 PLA2R1Q13018 1463 aa30.92■■■□□ 2.54
SREBF1-216ENST00000490796 TNRQ92752 1358 aa30.92■■■□□ 2.54
SREBF1-216ENST00000490796 FBXO31Q5XUX0 539 aaPredicted RBP30.91■■■□□ 2.54
SREBF1-216ENST00000490796 A2ML1A8K2U0 1454 aa30.89■■■□□ 2.54
SREBF1-216ENST00000490796 PZPP20742 1482 aa30.88■■■□□ 2.53
SREBF1-216ENST00000490796 MAST1Q9Y2H9 1570 aa30.87■■■□□ 2.53
SREBF1-216ENST00000490796 LTBP4Q8N2S1 1624 aa30.84■■■□□ 2.53
SREBF1-216ENST00000490796 TCOF1Q13428 1488 aaKnown RBP30.83■■■□□ 2.53
SREBF1-216ENST00000490796 DNMT1P26358 1616 aaKnown RBP30.8■■■□□ 2.52
SREBF1-216ENST00000490796 ZNF335Q9H4Z2 1342 aaPredicted RBP30.8■■■□□ 2.52
SREBF1-216ENST00000490796 IQSEC2Q5JU85 1478 aa30.78■■■□□ 2.52
SREBF1-216ENST00000490796 THEMISQ8N1K5 641 aaPredicted RBP30.77■■■□□ 2.52
SREBF1-216ENST00000490796 RNF17Q9BXT8 1623 aaKnown RBP30.76■■■□□ 2.51
SREBF1-216ENST00000490796 EIF2AK4Q9P2K8 1649 aaKnown RBP30.75■■■□□ 2.51
SREBF1-216ENST00000490796 DUOX2Q9NRD8 1548 aa30.74■■■□□ 2.51
SREBF1-216ENST00000490796 ANKLE2Q86XL3 938 aa30.74■■■□□ 2.51
SREBF1-216ENST00000490796 NLRP1Q9C000 1473 aa30.74■■■□□ 2.51
SREBF1-216ENST00000490796 ABCC3O15438 1527 aa30.73■■■□□ 2.51
SREBF1-216ENST00000490796 KIF15Q9NS87 1388 aa30.72■■■□□ 2.51
SREBF1-216ENST00000490796 RRP7BPQ9NSQ0 103 aa30.72■■■□□ 2.51
SREBF1-216ENST00000490796 PTPN23Q9H3S7 1636 aa30.72■■■□□ 2.51
SREBF1-216ENST00000490796 ZC3H13Q5T200 1668 aaKnown RBP30.71■■■□□ 2.51
SREBF1-216ENST00000490796 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP30.7■■■□□ 2.515e-15■■■■□ 23.7
SREBF1-216ENST00000490796 ABCC5O15440 1437 aa30.7■■■□□ 2.5
SREBF1-216ENST00000490796 SHANK2Q9UPX8 1470 aa30.69■■■□□ 2.5
SREBF1-216ENST00000490796 UGGT1Q9NYU2 1555 aa30.68■■■□□ 2.5
SREBF1-216ENST00000490796 FGD6Q6ZV73 1430 aa30.68■■■□□ 2.5
SREBF1-216ENST00000490796 UBAP1LF5GYI3 381 aa30.66■■■□□ 2.5
SREBF1-216ENST00000490796 DAPK1P53355 1430 aa30.65■■■□□ 2.5
SREBF1-216ENST00000490796 POLR1AO95602 1720 aaPredicted RBP30.64■■■□□ 2.5
SREBF1-216ENST00000490796 GRWD1Q9BQ67 446 aaKnown RBP eCLIP30.64■■■□□ 2.5
SREBF1-216ENST00000490796 ERBINQ96RT1 1412 aa30.64■■■□□ 2.49
SREBF1-216ENST00000490796 CHIC2Q9UKJ5 165 aa30.63■■■□□ 2.49
SREBF1-216ENST00000490796 CROCC2H7BZ55 1655 aa30.62■■■□□ 2.49
SREBF1-216ENST00000490796 ERVK-7P63135 1459 aa30.62■■■□□ 2.49
SREBF1-216ENST00000490796 SPATA31D1Q6ZQQ2 1576 aa30.61■■■□□ 2.49
SREBF1-216ENST00000490796 MROH1Q8NDA8 1641 aa30.61■■■□□ 2.49
SREBF1-216ENST00000490796 KANK1Q14678 1352 aa30.6■■■□□ 2.49
SREBF1-216ENST00000490796 ANKRD30AQ9BXX3 1397 aa30.6■■■□□ 2.49
SREBF1-216ENST00000490796 CEP152O94986 1710 aa30.59■■■□□ 2.49
SREBF1-216ENST00000490796 NEURL4Q96JN8 1562 aa30.58■■■□□ 2.49
SREBF1-216ENST00000490796 CFAP65Q6ZU64 1925 aaKnown RBP30.57■■■□□ 2.48
SREBF1-216ENST00000490796 NPHP4O75161 1426 aaPredicted RBP30.56■■■□□ 2.48
SREBF1-216ENST00000490796 FAM50AQ14320 339 aaKnown RBP30.56■■■□□ 2.48
SREBF1-216ENST00000490796 DISP3Q9P2K9 1392 aa30.55■■■□□ 2.48
SREBF1-216ENST00000490796 PRDM15P57071 1507 aaPredicted RBP30.54■■■□□ 2.48
SREBF1-216ENST00000490796 CPS1P31327 1500 aa30.52■■■□□ 2.48
SREBF1-216ENST00000490796 MED14O60244 1454 aa30.51■■■□□ 2.48
SREBF1-216ENST00000490796 ARHGAP31Q2M1Z3 1444 aa30.51■■■□□ 2.47
SREBF1-216ENST00000490796 DEPDC5O75140 1603 aa30.51■■■□□ 2.47
SREBF1-216ENST00000490796 SCAF1Q9H7N4 1312 aaKnown RBP30.49■■■□□ 2.47
SREBF1-216ENST00000490796 STAG3Q9UJ98 1225 aa30.47■■■□□ 2.47
SREBF1-216ENST00000490796 TOM1O60784 492 aa30.46■■■□□ 2.47
SREBF1-216ENST00000490796 IQGAP1P46940 1657 aa30.44■■■□□ 2.46
SREBF1-216ENST00000490796 EID1Q9Y6B2 187 aa30.43■■■□□ 2.46
SREBF1-216ENST00000490796 PIP4K2BP78356 416 aa30.42■■■□□ 2.46
SREBF1-216ENST00000490796 TXNDC2Q86VQ3 553 aa30.42■■■□□ 2.46
SREBF1-216ENST00000490796 VWDEQ8N2E2 1590 aa30.41■■■□□ 2.46
SREBF1-216ENST00000490796 UBR1Q8IWV7 1749 aa30.41■■■□□ 2.46
SREBF1-216ENST00000490796 SCAF11Q99590 1463 aaKnown RBP30.39■■■□□ 2.46
SREBF1-216ENST00000490796 ADGRL2O95490 1459 aa30.38■■■□□ 2.45
SREBF1-216ENST00000490796 LMTK2Q8IWU2 1503 aa30.37■■■□□ 2.45
SREBF1-216ENST00000490796 LTKP29376 864 aa30.35■■■□□ 2.45
SREBF1-216ENST00000490796 ANKRD50Q9ULJ7 1429 aa30.34■■■□□ 2.45
SREBF1-216ENST00000490796 SLIT1O75093 1534 aa30.32■■■□□ 2.44
SREBF1-216ENST00000490796 ARHGAP23Q9P227 1491 aa30.32■■■□□ 2.44
SREBF1-216ENST00000490796 IDI1Q13907 227 aa30.31■■■□□ 2.44
SREBF1-216ENST00000490796 PIK3C2BO00750 1634 aa30.31■■■□□ 2.44
SREBF1-216ENST00000490796 TMEM2Q9UHN6 1383 aa30.29■■■□□ 2.44
SREBF1-216ENST00000490796 EFCAB6Q5THR3 1501 aa30.27■■■□□ 2.44
SREBF1-216ENST00000490796 HSPA1LP34931 641 aa30.27■■■□□ 2.44
SREBF1-216ENST00000490796 ILDR2Q71H61 639 aa30.26■■■□□ 2.43
SREBF1-216ENST00000490796 SLC52A1Q9NWF4 448 aa30.26■■■□□ 2.43
SREBF1-216ENST00000490796 LRRC7Q96NW7 1537 aa30.25■■■□□ 2.43
SREBF1-216ENST00000490796 NOS1P29475 1434 aa30.23■■■□□ 2.43
SREBF1-216ENST00000490796 SYNMO15061 1565 aa30.22■■■□□ 2.43
SREBF1-216ENST00000490796 STRCP1A6NGW2 1772 aa30.2■■■□□ 2.43
SREBF1-216ENST00000490796 RPRD2Q5VT52 1461 aaKnown RBP30.2■■■□□ 2.43
SREBF1-216ENST00000490796 ITGAEP38570 1179 aa30.2■■■□□ 2.43
SREBF1-216ENST00000490796 BCANQ96GW7 911 aa30.2■■■□□ 2.43
SREBF1-216ENST00000490796 KDM5AP29375 1690 aaKnown RBP30.2■■■□□ 2.42
SREBF1-216ENST00000490796 PPARGC1BQ86YN6 1023 aaKnown RBP30.18■■■□□ 2.42
SREBF1-216ENST00000490796 ROCK1Q13464 1354 aa30.16■■■□□ 2.42
SREBF1-216ENST00000490796 ADGRB3O60242 1522 aa30.16■■■□□ 2.42
SREBF1-216ENST00000490796 SLC26A8Q96RN1 970 aa30.14■■■□□ 2.42
SREBF1-216ENST00000490796 SENP3Q9H4L4 574 aaPredicted RBP30.14■■■□□ 2.42
SREBF1-216ENST00000490796 TET3O43151 1660 aa30.14■■■□□ 2.41
SREBF1-216ENST00000490796 SOCS7O14512 581 aa30.13■■■□□ 2.41
SREBF1-216ENST00000490796 HDGFP51858 240 aaKnown RBP30.13■■■□□ 2.41
SREBF1-216ENST00000490796 PPP1R15AO75807 674 aaPredicted RBP30.11■■■□□ 2.41
SREBF1-216ENST00000490796 CHGAP10645 457 aaKnown RBP30.11■■■□□ 2.41
SREBF1-216ENST00000490796 KCNA6P17658 529 aa30.1■■■□□ 2.41
SREBF1-216ENST00000490796 UNC13BO14795 1591 aa30.09■■■□□ 2.41
SREBF1-216ENST00000490796 ALKQ9UM73 1620 aa30.08■■■□□ 2.41
Retrieved 100 of 20,778 RNA–protein pairs in 9.9 ms