RNA–Protein interactions for RNA: ENST00000490696.5

VPS26A-207, Transcript of VPS26, retromer complex component A, humanhuman

TSL 5

Gene VPS26A, Length 800 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS26A-207ENST00000490696 NCOA1Q15788 1441 aa23.65■■□□□ 1.38
VPS26A-207ENST00000490696 ZMYM3Q14202 1370 aa23.65■■□□□ 1.38
VPS26A-207ENST00000490696 ANKRD30AQ9BXX3 1397 aa23.65■■□□□ 1.38
VPS26A-207ENST00000490696 CLTCQ00610 1675 aaKnown RBP23.64■■□□□ 1.38
VPS26A-207ENST00000490696 ADGRL2O95490 1459 aa23.64■■□□□ 1.38
VPS26A-207ENST00000490696 LMTK3Q96Q04 1460 aa23.64■■□□□ 1.38
VPS26A-207ENST00000490696 EIF2AK4Q9P2K8 1649 aaKnown RBP23.64■■□□□ 1.38
VPS26A-207ENST00000490696 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP23.64■■□□□ 1.379e-8■□□□□ 9.9
VPS26A-207ENST00000490696 RNF17Q9BXT8 1623 aaKnown RBP23.62■■□□□ 1.37
VPS26A-207ENST00000490696 PTPRKQ15262 1439 aa23.62■■□□□ 1.37
VPS26A-207ENST00000490696 ERBINQ96RT1 1412 aa23.61■■□□□ 1.37
VPS26A-207ENST00000490696 FAM135AQ9P2D6 1515 aa23.61■■□□□ 1.37
VPS26A-207ENST00000490696 SETD1BQ9UPS6 1966 aaKnown RBP23.6■■□□□ 1.37
VPS26A-207ENST00000490696 RRBP1Q9P2E9 1410 aaKnown RBP23.59■■□□□ 1.37
VPS26A-207ENST00000490696 KDM5DQ9BY66 1539 aa23.59■■□□□ 1.37
VPS26A-207ENST00000490696 MROH1Q8NDA8 1641 aa23.57■■□□□ 1.36
VPS26A-207ENST00000490696 NPATQ14207 1427 aa23.57■■□□□ 1.36
VPS26A-207ENST00000490696 WASHC2CQ9Y4E1 1318 aa23.57■■□□□ 1.36
VPS26A-207ENST00000490696 PREX1Q8TCU6 1659 aa23.56■■□□□ 1.36
VPS26A-207ENST00000490696 ABCC3O15438 1527 aa23.53■■□□□ 1.36
VPS26A-207ENST00000490696 ROCK1Q13464 1354 aa23.52■■□□□ 1.36
VPS26A-207ENST00000490696 UHRF1BP1Q6BDS2 1440 aa23.52■■□□□ 1.36
VPS26A-207ENST00000490696 PRDM15P57071 1507 aaPredicted RBP23.51■■□□□ 1.35
VPS26A-207ENST00000490696 HSPA2P54652 639 aa23.51■■□□□ 1.35
VPS26A-207ENST00000490696 DEPDC5O75140 1603 aa23.5■■□□□ 1.35
VPS26A-207ENST00000490696 ANKRD50Q9ULJ7 1429 aa23.5■■□□□ 1.35
VPS26A-207ENST00000490696 PZPP20742 1482 aa23.49■■□□□ 1.35
VPS26A-207ENST00000490696 ZC3H13Q5T200 1668 aaKnown RBP23.49■■□□□ 1.35
VPS26A-207ENST00000490696 ITGAEP38570 1179 aa23.49■■□□□ 1.35
VPS26A-207ENST00000490696 FBXO31Q5XUX0 539 aaPredicted RBP23.45■■□□□ 1.34
VPS26A-207ENST00000490696 CEP152O94986 1710 aa23.45■■□□□ 1.34
VPS26A-207ENST00000490696 GRWD1Q9BQ67 446 aaKnown RBP eCLIP23.44■■□□□ 1.34
VPS26A-207ENST00000490696 VWDEQ8N2E2 1590 aa23.43■■□□□ 1.34
VPS26A-207ENST00000490696 KANK1Q14678 1352 aa23.41■■□□□ 1.34
VPS26A-207ENST00000490696 CAMSAP1Q5T5Y3 1602 aa23.41■■□□□ 1.34
VPS26A-207ENST00000490696 MYO3AQ8NEV4 1616 aa23.41■■□□□ 1.34
VPS26A-207ENST00000490696 TNRQ92752 1358 aa23.4■■□□□ 1.34
VPS26A-207ENST00000490696 LMTK2Q8IWU2 1503 aa23.39■■□□□ 1.34
VPS26A-207ENST00000490696 ARHGAP31Q2M1Z3 1444 aa23.39■■□□□ 1.33
VPS26A-207ENST00000490696 ZNF142P52746 1687 aaPredicted RBP23.38■■□□□ 1.33
VPS26A-207ENST00000490696 SPATA31D1Q6ZQQ2 1576 aa23.37■■□□□ 1.33
VPS26A-207ENST00000490696 CEP170BQ9Y4F5 1589 aaPredicted RBP23.37■■□□□ 1.33
VPS26A-207ENST00000490696 ERVK-7P63135 1459 aa23.36■■□□□ 1.33
VPS26A-207ENST00000490696 A2ML1A8K2U0 1454 aa23.35■■□□□ 1.33
VPS26A-207ENST00000490696 UNC13BO14795 1591 aa23.35■■□□□ 1.33
VPS26A-207ENST00000490696 STRCQ7RTU9 1775 aa23.32■■□□□ 1.32
VPS26A-207ENST00000490696 NLRP1Q9C000 1473 aa23.31■■□□□ 1.32
VPS26A-207ENST00000490696 NAIPQ13075 1403 aa23.31■■□□□ 1.32
VPS26A-207ENST00000490696 EFCAB6Q5THR3 1501 aa23.3■■□□□ 1.32
VPS26A-207ENST00000490696 CFAP65Q6ZU64 1925 aaKnown RBP23.3■■□□□ 1.32
VPS26A-207ENST00000490696 HFM1A2PYH4 1435 aa23.27■■□□□ 1.32
VPS26A-207ENST00000490696 PLA2R1Q13018 1463 aa23.27■■□□□ 1.32
VPS26A-207ENST00000490696 TET3O43151 1660 aa23.25■■□□□ 1.31
VPS26A-207ENST00000490696 GCC2Q8IWJ2 1684 aa23.25■■□□□ 1.31
VPS26A-207ENST00000490696 IQGAP3Q86VI3 1631 aa23.25■■□□□ 1.31
VPS26A-207ENST00000490696 NUP155O75694 1391 aa23.25■■□□□ 1.31
VPS26A-207ENST00000490696 NOS1P29475 1434 aa23.24■■□□□ 1.31
VPS26A-207ENST00000490696 RPRD2Q5VT52 1461 aaKnown RBP23.24■■□□□ 1.31
VPS26A-207ENST00000490696 DMRT2Q9Y5R5 561 aa23.23■■□□□ 1.31
VPS26A-207ENST00000490696 UGGT1Q9NYU2 1555 aa23.23■■□□□ 1.31
VPS26A-207ENST00000490696 PTPRTO14522 1441 aa23.21■■□□□ 1.31
VPS26A-207ENST00000490696 NCKAP5LQ9HCH0 1330 aa23.2■■□□□ 1.3
VPS26A-207ENST00000490696 PKD2Q13563 968 aa23.2■■□□□ 1.3
VPS26A-207ENST00000490696 THEMISQ8N1K5 641 aaPredicted RBP23.2■■□□□ 1.3
VPS26A-207ENST00000490696 CERKQ8TCT0 537 aa23.2■■□□□ 1.3
VPS26A-207ENST00000490696 SYNMO15061 1565 aa23.19■■□□□ 1.3
VPS26A-207ENST00000490696 E9PCH4 1651 aa23.16■■□□□ 1.3
VPS26A-207ENST00000490696 IDI1Q13907 227 aa23.15■■□□□ 1.3
VPS26A-207ENST00000490696 UBR1Q8IWV7 1749 aa23.15■■□□□ 1.3
VPS26A-207ENST00000490696 PIK3C2BO00750 1634 aa23.14■■□□□ 1.29
VPS26A-207ENST00000490696 SLC52A1Q9NWF4 448 aa23.13■■□□□ 1.29
VPS26A-207ENST00000490696 ANKLE2Q86XL3 938 aa23.12■■□□□ 1.29
VPS26A-207ENST00000490696 DISP3Q9P2K9 1392 aa23.12■■□□□ 1.29
VPS26A-207ENST00000490696 NEURL4Q96JN8 1562 aa23.1■■□□□ 1.29
VPS26A-207ENST00000490696 POLR1AO95602 1720 aaPredicted RBP23.1■■□□□ 1.29
VPS26A-207ENST00000490696 SOCS7O14512 581 aa23.09■■□□□ 1.29
VPS26A-207ENST00000490696 ARHGAP23Q9P227 1491 aa23.09■■□□□ 1.29
VPS26A-207ENST00000490696 KDM5AP29375 1690 aaKnown RBP23.09■■□□□ 1.29
VPS26A-207ENST00000490696 SLIT1O75093 1534 aa23.08■■□□□ 1.28
VPS26A-207ENST00000490696 TRIM52Q96A61 297 aa23.07■■□□□ 1.28
VPS26A-207ENST00000490696 MED14O60244 1454 aa23.06■■□□□ 1.28
VPS26A-207ENST00000490696 ILDR2Q71H61 639 aa23.06■■□□□ 1.28
VPS26A-207ENST00000490696 STAG3Q9UJ98 1225 aa23.06■■□□□ 1.28
VPS26A-207ENST00000490696 ADGRB3O60242 1522 aa23.06■■□□□ 1.28
VPS26A-207ENST00000490696 TMEM2Q9UHN6 1383 aa23.05■■□□□ 1.28
VPS26A-207ENST00000490696 NPHP4O75161 1426 aaPredicted RBP23.03■■□□□ 1.28
VPS26A-207ENST00000490696 SETD5Q9C0A6 1442 aa23.03■■□□□ 1.28
VPS26A-207ENST00000490696 LTKP29376 864 aa23.03■■□□□ 1.28
VPS26A-207ENST00000490696 SCAF11Q99590 1463 aaKnown RBP23.03■■□□□ 1.28
VPS26A-207ENST00000490696 TXNDC2Q86VQ3 553 aa23.01■■□□□ 1.27
VPS26A-207ENST00000490696 SPHKAPQ2M3C7 1700 aa23■■□□□ 1.27
VPS26A-207ENST00000490696 SLC4A1APQ9BWU0 796 aaKnown RBP23■■□□□ 1.27
VPS26A-207ENST00000490696 TMEM131LA2VDJ0 1609 aa23■■□□□ 1.27
VPS26A-207ENST00000490696 LTBP4Q8N2S1 1624 aa23■■□□□ 1.27
VPS26A-207ENST00000490696 IQGAP1P46940 1657 aa22.98■■□□□ 1.27
VPS26A-207ENST00000490696 EID1Q9Y6B2 187 aa22.98■■□□□ 1.27
VPS26A-207ENST00000490696 ZNF335Q9H4Z2 1342 aaPredicted RBP22.98■■□□□ 1.27
VPS26A-207ENST00000490696 FOXD1Q16676 465 aa22.97■■□□□ 1.27
VPS26A-207ENST00000490696 RAB3GAP2Q9H2M9 1393 aa22.96■■□□□ 1.27
VPS26A-207ENST00000490696 MYO5BQ9ULV0 1848 aa22.96■■□□□ 1.27
Retrieved 100 of 20,778 RNA–protein pairs in 7.7 ms