RNA–Protein interactions for RNA: ENST00000490610.1

CACUL1-205, Transcript of CDK2 associated cullin domain 1, humanhuman

TSL 2

Gene CACUL1, Length 394 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CACUL1-205ENST00000490610 KIAA1107Q9UPP5 1409 aa13.43□□□□□ -0.26
CACUL1-205ENST00000490610 SYCP2Q9BX26 1530 aa13.43□□□□□ -0.26
CACUL1-205ENST00000490610 ABCA9Q8IUA7 1624 aa13.42□□□□□ -0.26
CACUL1-205ENST00000490610 MBD5Q9P267 1494 aa13.42□□□□□ -0.26
CACUL1-205ENST00000490610 TSPY4P0CV99 314 aa13.41□□□□□ -0.26
CACUL1-205ENST00000490610 TSPY10P0CW01 314 aa13.41□□□□□ -0.26
CACUL1-205ENST00000490610 VASPP50552 380 aaPredicted RBP13.41□□□□□ -0.26
CACUL1-205ENST00000490610 ABCC1P33527 1531 aa13.4□□□□□ -0.26
CACUL1-205ENST00000490610 SP7Q8TDD2 431 aaPredicted RBP13.4□□□□□ -0.26
CACUL1-205ENST00000490610 PLXNC1O60486 1568 aa13.4□□□□□ -0.26
CACUL1-205ENST00000490610 TRIM52Q96A61 297 aa13.39□□□□□ -0.27
CACUL1-205ENST00000490610 ZNF316A6NFI3 1004 aaPredicted RBP13.38□□□□□ -0.27
CACUL1-205ENST00000490610 NPM1P06748 294 aaKnown RBP eCLIP13.38□□□□□ -0.27
CACUL1-205ENST00000490610 MIER1Q8N108 512 aa13.38□□□□□ -0.27
CACUL1-205ENST00000490610 KCNH8Q96L42 1107 aa13.38□□□□□ -0.27
CACUL1-205ENST00000490610 ASXL2Q76L83 1435 aa13.38□□□□□ -0.27
CACUL1-205ENST00000490610 ANKRD50Q9ULJ7 1429 aa13.38□□□□□ -0.27
CACUL1-205ENST00000490610 EFCAB2Q5VUJ9 269 aa13.37□□□□□ -0.27
CACUL1-205ENST00000490610 CFAP74Q9C0B2 1584 aa13.37□□□□□ -0.27
CACUL1-205ENST00000490610 KIF15Q9NS87 1388 aa13.35□□□□□ -0.27
CACUL1-205ENST00000490610 KDM5DQ9BY66 1539 aa13.35□□□□□ -0.27
CACUL1-205ENST00000490610 HNRNPMP52272 730 aaKnown RBP eCLIP13.35□□□□□ -0.27
CACUL1-205ENST00000490610 PLCD3Q8N3E9 789 aa13.35□□□□□ -0.27
CACUL1-205ENST00000490610 TONSLQ96HA7 1378 aa13.34□□□□□ -0.27
CACUL1-205ENST00000490610 EVX2Q03828 476 aa13.34□□□□□ -0.27
CACUL1-205ENST00000490610 MPHOSPH9Q99550 1183 aa13.33□□□□□ -0.28
CACUL1-205ENST00000490610 DENND4BO75064 1496 aaPredicted RBP13.33□□□□□ -0.28
CACUL1-205ENST00000490610 FANCAO15360 1455 aa13.32□□□□□ -0.28
CACUL1-205ENST00000490610 PZPP20742 1482 aa13.32□□□□□ -0.28
CACUL1-205ENST00000490610 NEUROD1Q13562 356 aa13.32□□□□□ -0.28
CACUL1-205ENST00000490610 FARP1Q9Y4F1 1045 aaPredicted RBP13.32□□□□□ -0.28
CACUL1-205ENST00000490610 DUOX2Q9NRD8 1548 aa13.32□□□□□ -0.28
CACUL1-205ENST00000490610 C19orf67A6NJJ6 358 aa13.31□□□□□ -0.28
CACUL1-205ENST00000490610 MNX1P50219 401 aaPredicted RBP13.31□□□□□ -0.28
CACUL1-205ENST00000490610 SIN3AQ96ST3 1273 aa13.31□□□□□ -0.28
CACUL1-205ENST00000490610 UNC13BO14795 1591 aa13.31□□□□□ -0.28
CACUL1-205ENST00000490610 RIMBP3CA6NJZ7 1639 aa13.31□□□□□ -0.28
CACUL1-205ENST00000490610 RIMBP3BA6NNM3 1639 aa13.31□□□□□ -0.28
CACUL1-205ENST00000490610 RIMBP3Q9UFD9 1639 aa13.31□□□□□ -0.28
CACUL1-205ENST00000490610 ARHGEF12Q9NZN5 1544 aa13.3□□□□□ -0.28
CACUL1-205ENST00000490610 RTEL1-TNFRSF6BF6WH68 1400 aa13.3□□□□□ -0.28
CACUL1-205ENST00000490610 PLEKHG5O94827 1062 aa13.29□□□□□ -0.28
CACUL1-205ENST00000490610 ERBINQ96RT1 1412 aa13.29□□□□□ -0.28
CACUL1-205ENST00000490610 DIEXFQ68CQ4 756 aaKnown RBP13.27□□□□□ -0.29
CACUL1-205ENST00000490610 ANKRD30BQ9BXX2 1392 aa13.27□□□□□ -0.29
CACUL1-205ENST00000490610 ADGRL1O94910 1474 aa13.27□□□□□ -0.29
CACUL1-205ENST00000490610 ZFYVE16Q7Z3T8 1539 aa13.27□□□□□ -0.29
CACUL1-205ENST00000490610 INO80Q9ULG1 1556 aaPredicted RBP13.27□□□□□ -0.29
CACUL1-205ENST00000490610 RPRD2Q5VT52 1461 aaKnown RBP13.26□□□□□ -0.29
CACUL1-205ENST00000490610 IQGAP3Q86VI3 1631 aa13.25□□□□□ -0.29
CACUL1-205ENST00000490610 TRAPPC8Q9Y2L5 1435 aa13.25□□□□□ -0.29
CACUL1-205ENST00000490610 NUP155O75694 1391 aa13.25□□□□□ -0.29
CACUL1-205ENST00000490610 ATP7AQ04656 1500 aa13.24□□□□□ -0.29
CACUL1-205ENST00000490610 PPP1R15AO75807 674 aaPredicted RBP13.24□□□□□ -0.29
CACUL1-205ENST00000490610 FAM135AQ9P2D6 1515 aa13.23□□□□□ -0.29
CACUL1-205ENST00000490610 MAGI2Q86UL8 1455 aa13.23□□□□□ -0.29
CACUL1-205ENST00000490610 CD109Q6YHK3 1445 aa13.23□□□□□ -0.29
CACUL1-205ENST00000490610 SPAG9O60271 1321 aaKnown RBP13.23□□□□□ -0.29
CACUL1-205ENST00000490610 ZNF518AQ6AHZ1 1483 aa13.23□□□□□ -0.29
CACUL1-205ENST00000490610 EIF2AK4Q9P2K8 1649 aaKnown RBP13.22□□□□□ -0.29
CACUL1-205ENST00000490610 IFNLR1Q8IU57 520 aaPredicted RBP13.22□□□□□ -0.29
CACUL1-205ENST00000490610 GLI2P10070 1586 aa13.22□□□□□ -0.29
CACUL1-205ENST00000490610 SCAPERQ9BY12 1400 aa13.22□□□□□ -0.29
CACUL1-205ENST00000490610 NEO1Q92859 1461 aa13.21□□□□□ -0.3
CACUL1-205ENST00000490610 MAP3K4Q9Y6R4 1608 aa13.21□□□□□ -0.3
CACUL1-205ENST00000490610 TEX14Q8IWB6 1497 aa13.2□□□□□ -0.3
CACUL1-205ENST00000490610 DEPDC5O75140 1603 aa13.2□□□□□ -0.3
CACUL1-205ENST00000490610 PKD2Q13563 968 aa13.19□□□□□ -0.3
CACUL1-205ENST00000490610 ZBTB47Q9UFB7 747 aaPredicted RBP13.19□□□□□ -0.3
CACUL1-205ENST00000490610 KDM5CP41229 1560 aa13.19□□□□□ -0.3
CACUL1-205ENST00000490610 KIDINS220Q9ULH0 1771 aa13.17□□□□□ -0.3
CACUL1-205ENST00000490610 HECW2Q9P2P5 1572 aa13.17□□□□□ -0.3
CACUL1-205ENST00000490610 POGZQ7Z3K3 1410 aa13.17□□□□□ -0.3
CACUL1-205ENST00000490610 CD44P16070 742 aaKnown RBP13.17□□□□□ -0.3
CACUL1-205ENST00000490610 CYB5RLQ6IPT4 315 aa13.16□□□□□ -0.3
CACUL1-205ENST00000490610 KLHL34Q8N239 644 aa13.16□□□□□ -0.3
CACUL1-205ENST00000490610 AFAP1Q8N556 730 aa13.15□□□□□ -0.3
CACUL1-205ENST00000490610 DIP2BQ9P265 1576 aa13.15□□□□□ -0.3
CACUL1-205ENST00000490610 TET3O43151 1660 aa13.13□□□□□ -0.31
CACUL1-205ENST00000490610 MLH3Q9UHC1 1453 aa13.13□□□□□ -0.31
CACUL1-205ENST00000490610 PRDM15P57071 1507 aaPredicted RBP13.13□□□□□ -0.31
CACUL1-205ENST00000490610 KANK1Q14678 1352 aa13.12□□□□□ -0.31
CACUL1-205ENST00000490610 L3MBTL2Q969R5 705 aa13.12□□□□□ -0.31
CACUL1-205ENST00000490610 BCORL1Q5H9F3 1711 aa13.12□□□□□ -0.31
CACUL1-205ENST00000490610 ATP10AO60312 1499 aa13.11□□□□□ -0.31
CACUL1-205ENST00000490610 RICTORQ6R327 1708 aa13.11□□□□□ -0.31
CACUL1-205ENST00000490610 DHX29Q7Z478 1369 aaKnown RBP13.11□□□□□ -0.31
CACUL1-205ENST00000490610 RNF17Q9BXT8 1623 aaKnown RBP13.11□□□□□ -0.31
CACUL1-205ENST00000490610 MYT1LQ9UL68 1186 aa13.11□□□□□ -0.31
CACUL1-205ENST00000490610 CCDC144AA2RUR9 1427 aa13.11□□□□□ -0.31
CACUL1-205ENST00000490610 VWDEQ8N2E2 1590 aa13.11□□□□□ -0.31
CACUL1-205ENST00000490610 A2MP01023 1474 aa13.1□□□□□ -0.31
CACUL1-205ENST00000490610 E9PCH4 1651 aa13.09□□□□□ -0.31
CACUL1-205ENST00000490610 NUBP1P53384 320 aa13.09□□□□□ -0.31
CACUL1-205ENST00000490610 SPHKAPQ2M3C7 1700 aa13.09□□□□□ -0.31
CACUL1-205ENST00000490610 ABCA6Q8N139 1617 aa13.08□□□□□ -0.32
CACUL1-205ENST00000490610 MROH1Q8NDA8 1641 aa13.07□□□□□ -0.32
CACUL1-205ENST00000490610 UHRF1BP1Q6BDS2 1440 aa13.06□□□□□ -0.32
CACUL1-205ENST00000490610 GABBR2O75899 941 aa13.06□□□□□ -0.32
CACUL1-205ENST00000490610 RASEFQ8IZ41 740 aa13.06□□□□□ -0.32
Retrieved 100 of 20,778 RNA–protein pairs in 30.3 ms