RNA–Protein interactions for RNA: ENST00000490609.1

COL2A1-207, Transcript of collagen type II alpha 1 chain, humanhuman

TSL 2

Gene COL2A1, Length 679 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL2A1-207ENST00000490609 A2ML1A8K2U0 1454 aa24.91■■□□□ 1.58
COL2A1-207ENST00000490609 VPS8Q8N3P4 1428 aa24.9■■□□□ 1.58
COL2A1-207ENST00000490609 PKD2Q13563 968 aa24.89■■□□□ 1.58
COL2A1-207ENST00000490609 KANK4Q5T7N3 995 aaPredicted RBP24.89■■□□□ 1.58
COL2A1-207ENST00000490609 RSPH4AQ5TD94 716 aa24.89■■□□□ 1.58
COL2A1-207ENST00000490609 KDM5DQ9BY66 1539 aa24.87■■□□□ 1.57
COL2A1-207ENST00000490609 PZPP20742 1482 aa24.87■■□□□ 1.57
COL2A1-207ENST00000490609 NEURL4Q96JN8 1562 aa24.85■■□□□ 1.57
COL2A1-207ENST00000490609 FAM135AQ9P2D6 1515 aa24.85■■□□□ 1.57
COL2A1-207ENST00000490609 POLR1AO95602 1720 aaPredicted RBP24.84■■□□□ 1.57
COL2A1-207ENST00000490609 MAST1Q9Y2H9 1570 aa24.84■■□□□ 1.57
COL2A1-207ENST00000490609 ILDR2Q71H61 639 aa24.83■■□□□ 1.57
COL2A1-207ENST00000490609 RNF17Q9BXT8 1623 aaKnown RBP24.83■■□□□ 1.56
COL2A1-207ENST00000490609 TNRQ92752 1358 aa24.82■■□□□ 1.56
COL2A1-207ENST00000490609 MAP3K1Q13233 1512 aa24.82■■□□□ 1.56
COL2A1-207ENST00000490609 WASHC2CQ9Y4E1 1318 aa24.81■■□□□ 1.56
COL2A1-207ENST00000490609 CFAP65Q6ZU64 1925 aaKnown RBP24.8■■□□□ 1.56
COL2A1-207ENST00000490609 MROH1Q8NDA8 1641 aa24.79■■□□□ 1.56
COL2A1-207ENST00000490609 TSPY4P0CV99 314 aa24.78■■□□□ 1.56
COL2A1-207ENST00000490609 TSPY10P0CW01 314 aa24.78■■□□□ 1.56
COL2A1-207ENST00000490609 MIA2Q96PC5 1412 aa24.78■■□□□ 1.56
COL2A1-207ENST00000490609 DISP3Q9P2K9 1392 aa24.76■■□□□ 1.55
COL2A1-207ENST00000490609 ABCC3O15438 1527 aa24.76■■□□□ 1.55
COL2A1-207ENST00000490609 MYOM3Q5VTT5 1437 aa24.75■■□□□ 1.55
COL2A1-207ENST00000490609 EIF2AK4Q9P2K8 1649 aaKnown RBP24.73■■□□□ 1.55
COL2A1-207ENST00000490609 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP24.73■■□□□ 1.55
COL2A1-207ENST00000490609 CEP152O94986 1710 aa24.72■■□□□ 1.55
COL2A1-207ENST00000490609 NLRP1Q9C000 1473 aa24.71■■□□□ 1.55
COL2A1-207ENST00000490609 ZC3H13Q5T200 1668 aaKnown RBP24.71■■□□□ 1.55
COL2A1-207ENST00000490609 SPATA31D1Q6ZQQ2 1576 aa24.71■■□□□ 1.55
COL2A1-207ENST00000490609 VWDEQ8N2E2 1590 aa24.71■■□□□ 1.55
COL2A1-207ENST00000490609 UBAP1LF5GYI3 381 aa24.7■■□□□ 1.54
COL2A1-207ENST00000490609 UGGT1Q9NYU2 1555 aa24.7■■□□□ 1.54
COL2A1-207ENST00000490609 DEPDC5O75140 1603 aa24.69■■□□□ 1.54
COL2A1-207ENST00000490609 MED14O60244 1454 aa24.69■■□□□ 1.54
COL2A1-207ENST00000490609 STRCP1A6NGW2 1772 aa24.68■■□□□ 1.54
COL2A1-207ENST00000490609 CROCC2H7BZ55 1655 aa24.67■■□□□ 1.54
COL2A1-207ENST00000490609 SHANK2Q9UPX8 1470 aa24.67■■□□□ 1.54
COL2A1-207ENST00000490609 THEMISQ8N1K5 641 aaPredicted RBP24.66■■□□□ 1.54
COL2A1-207ENST00000490609 ERVK-7P63135 1459 aa24.65■■□□□ 1.54
COL2A1-207ENST00000490609 ANKLE2Q86XL3 938 aa24.65■■□□□ 1.54
COL2A1-207ENST00000490609 ALKQ9UM73 1620 aa24.64■■□□□ 1.54
COL2A1-207ENST00000490609 ABCC5O15440 1437 aa24.64■■□□□ 1.54
COL2A1-207ENST00000490609 DUOX2Q9NRD8 1548 aa24.64■■□□□ 1.53
COL2A1-207ENST00000490609 CPS1P31327 1500 aa24.63■■□□□ 1.53
COL2A1-207ENST00000490609 UBR1Q8IWV7 1749 aa24.63■■□□□ 1.53
COL2A1-207ENST00000490609 PTPN23Q9H3S7 1636 aa24.62■■□□□ 1.53
COL2A1-207ENST00000490609 IQGAP1P46940 1657 aa24.62■■□□□ 1.53
COL2A1-207ENST00000490609 NPHP4O75161 1426 aaPredicted RBP24.61■■□□□ 1.53
COL2A1-207ENST00000490609 PRDM15P57071 1507 aaPredicted RBP24.58■■□□□ 1.53
COL2A1-207ENST00000490609 KIF15Q9NS87 1388 aa24.56■■□□□ 1.52
COL2A1-207ENST00000490609 SOCS7O14512 581 aa24.56■■□□□ 1.52
COL2A1-207ENST00000490609 RRP7BPQ9NSQ0 103 aa24.55■■□□□ 1.52
COL2A1-207ENST00000490609 DAPK1P53355 1430 aa24.54■■□□□ 1.52
COL2A1-207ENST00000490609 ARHGAP31Q2M1Z3 1444 aa24.54■■□□□ 1.52
COL2A1-207ENST00000490609 HSPA1LP34931 641 aa24.53■■□□□ 1.52
COL2A1-207ENST00000490609 FGD6Q6ZV73 1430 aa24.52■■□□□ 1.52
COL2A1-207ENST00000490609 ERBINQ96RT1 1412 aa24.52■■□□□ 1.52
COL2A1-207ENST00000490609 ARHGAP23Q9P227 1491 aa24.51■■□□□ 1.51
COL2A1-207ENST00000490609 LTKP29376 864 aa24.51■■□□□ 1.51
COL2A1-207ENST00000490609 LRRC7Q96NW7 1537 aa24.5■■□□□ 1.51
COL2A1-207ENST00000490609 XIRP1Q702N8 1843 aaKnown RBP24.49■■□□□ 1.51
COL2A1-207ENST00000490609 PIP4K2BP78356 416 aa24.49■■□□□ 1.51
COL2A1-207ENST00000490609 SLIT1O75093 1534 aa24.49■■□□□ 1.51
COL2A1-207ENST00000490609 PIK3C2BO00750 1634 aa24.48■■□□□ 1.51
COL2A1-207ENST00000490609 TOM1O60784 492 aa24.47■■□□□ 1.51
COL2A1-207ENST00000490609 SCAF11Q99590 1463 aaKnown RBP24.45■■□□□ 1.5
COL2A1-207ENST00000490609 GRWD1Q9BQ67 446 aaKnown RBP eCLIP24.44■■□□□ 1.5
COL2A1-207ENST00000490609 CHIC2Q9UKJ5 165 aa24.44■■□□□ 1.5
COL2A1-207ENST00000490609 LMTK2Q8IWU2 1503 aa24.44■■□□□ 1.5
COL2A1-207ENST00000490609 SCAF1Q9H7N4 1312 aaKnown RBP24.42■■□□□ 1.5
COL2A1-207ENST00000490609 SYNMO15061 1565 aa24.42■■□□□ 1.5
COL2A1-207ENST00000490609 MED1Q15648 1581 aaPredicted RBP24.41■■□□□ 1.5
COL2A1-207ENST00000490609 TXNDC2Q86VQ3 553 aa24.4■■□□□ 1.5
COL2A1-207ENST00000490609 KDM5AP29375 1690 aaKnown RBP24.4■■□□□ 1.5
COL2A1-207ENST00000490609 APLP2Q06481 763 aa24.39■■□□□ 1.49
COL2A1-207ENST00000490609 IDI1Q13907 227 aa24.38■■□□□ 1.49
COL2A1-207ENST00000490609 ANKRD30AQ9BXX3 1397 aa24.38■■□□□ 1.49
COL2A1-207ENST00000490609 ADGRL2O95490 1459 aa24.38■■□□□ 1.49
COL2A1-207ENST00000490609 TMEM2Q9UHN6 1383 aa24.37■■□□□ 1.49
COL2A1-207ENST00000490609 NOS1P29475 1434 aa24.35■■□□□ 1.49
COL2A1-207ENST00000490609 TET3O43151 1660 aa24.35■■□□□ 1.49
COL2A1-207ENST00000490609 EFCAB6Q5THR3 1501 aa24.35■■□□□ 1.49
COL2A1-207ENST00000490609 MYO5BQ9ULV0 1848 aa24.33■■□□□ 1.48
COL2A1-207ENST00000490609 KANK1Q14678 1352 aa24.32■■□□□ 1.48
COL2A1-207ENST00000490609 EID1Q9Y6B2 187 aa24.28■■□□□ 1.48
COL2A1-207ENST00000490609 ADGRB3O60242 1522 aa24.25■■□□□ 1.47
COL2A1-207ENST00000490609 ANKRD50Q9ULJ7 1429 aa24.25■■□□□ 1.47
COL2A1-207ENST00000490609 FAM50AQ14320 339 aaKnown RBP24.24■■□□□ 1.47
COL2A1-207ENST00000490609 SENP3Q9H4L4 574 aaPredicted RBP24.23■■□□□ 1.47
COL2A1-207ENST00000490609 SLC26A8Q96RN1 970 aa24.22■■□□□ 1.47
COL2A1-207ENST00000490609 STAG3Q9UJ98 1225 aa24.22■■□□□ 1.47
COL2A1-207ENST00000490609 KCNA6P17658 529 aa24.2■■□□□ 1.46
COL2A1-207ENST00000490609 SLC52A1Q9NWF4 448 aa24.2■■□□□ 1.46
COL2A1-207ENST00000490609 GCC2Q8IWJ2 1684 aa24.2■■□□□ 1.46
COL2A1-207ENST00000490609 RPRD2Q5VT52 1461 aaKnown RBP24.19■■□□□ 1.46
COL2A1-207ENST00000490609 ZFYVE9O95405 1425 aa24.19■■□□□ 1.46
COL2A1-207ENST00000490609 TMEM131LA2VDJ0 1609 aa24.19■■□□□ 1.46
COL2A1-207ENST00000490609 UNC13BO14795 1591 aa24.19■■□□□ 1.46
COL2A1-207ENST00000490609 CHD2O14647 1828 aaKnown RBP24.19■■□□□ 1.46
Retrieved 100 of 20,778 RNA–protein pairs in 27.6 ms