RNA–Protein interactions for RNA: ENST00000490471.1

CDCP1-203, Transcript of CUB domain containing protein 1, humanhuman

TSL 4

Gene CDCP1, Length 563 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDCP1-203ENST00000490471 LRRC9Q6ZRR7 1453 aa17.77■□□□□ 0.44
CDCP1-203ENST00000490471 CLTCQ00610 1675 aaKnown RBP17.77■□□□□ 0.43
CDCP1-203ENST00000490471 PKD2Q13563 968 aa17.75■□□□□ 0.43
CDCP1-203ENST00000490471 FAM135AQ9P2D6 1515 aa17.75■□□□□ 0.43
CDCP1-203ENST00000490471 WASHC2CQ9Y4E1 1318 aa17.74■□□□□ 0.43
CDCP1-203ENST00000490471 ARHGEF5Q12774 1597 aa17.74■□□□□ 0.43
CDCP1-203ENST00000490471 MIA2Q96PC5 1412 aa17.73■□□□□ 0.43
CDCP1-203ENST00000490471 STRCQ7RTU9 1775 aa17.72■□□□□ 0.43
CDCP1-203ENST00000490471 RNF216Q9NWF9 866 aaPredicted RBP17.71■□□□□ 0.43
CDCP1-203ENST00000490471 NCOA1Q15788 1441 aa17.7■□□□□ 0.42
CDCP1-203ENST00000490471 PTPRKQ15262 1439 aa17.69■□□□□ 0.42
CDCP1-203ENST00000490471 CAMSAP1Q5T5Y3 1602 aa17.69■□□□□ 0.42
CDCP1-203ENST00000490471 MYOM3Q5VTT5 1437 aa17.68■□□□□ 0.42
CDCP1-203ENST00000490471 PLA2R1Q13018 1463 aa17.67■□□□□ 0.42
CDCP1-203ENST00000490471 KDM5DQ9BY66 1539 aa17.67■□□□□ 0.42
CDCP1-203ENST00000490471 ZNF142P52746 1687 aaPredicted RBP17.65■□□□□ 0.42
CDCP1-203ENST00000490471 THEMISQ8N1K5 641 aaPredicted RBP17.65■□□□□ 0.42
CDCP1-203ENST00000490471 CEP170BQ9Y4F5 1589 aaPredicted RBP17.65■□□□□ 0.42
CDCP1-203ENST00000490471 MYO3AQ8NEV4 1616 aa17.65■□□□□ 0.42
CDCP1-203ENST00000490471 TNRQ92752 1358 aa17.65■□□□□ 0.42
CDCP1-203ENST00000490471 KANK4Q5T7N3 995 aaPredicted RBP17.64■□□□□ 0.41
CDCP1-203ENST00000490471 MAST1Q9Y2H9 1570 aa17.64■□□□□ 0.41
CDCP1-203ENST00000490471 A2ML1A8K2U0 1454 aa17.63■□□□□ 0.41
CDCP1-203ENST00000490471 IQSEC2Q5JU85 1478 aa17.63■□□□□ 0.41
CDCP1-203ENST00000490471 NCKAP5LQ9HCH0 1330 aa17.63■□□□□ 0.41
CDCP1-203ENST00000490471 PZPP20742 1482 aa17.62■□□□□ 0.41
CDCP1-203ENST00000490471 ANKLE2Q86XL3 938 aa17.61■□□□□ 0.41
CDCP1-203ENST00000490471 NCBP3Q53F19 620 aaKnown RBP17.6■□□□□ 0.41
CDCP1-203ENST00000490471 EIF2AK4Q9P2K8 1649 aaKnown RBP17.6■□□□□ 0.41
CDCP1-203ENST00000490471 NLRP1Q9C000 1473 aa17.59■□□□□ 0.41
CDCP1-203ENST00000490471 ZC3H13Q5T200 1668 aaKnown RBP17.58■□□□□ 0.41
CDCP1-203ENST00000490471 DUOX2Q9NRD8 1548 aa17.58■□□□□ 0.41
CDCP1-203ENST00000490471 DCAF8L1A6NGE4 600 aa17.58■□□□□ 0.4
CDCP1-203ENST00000490471 KANK1Q14678 1352 aa17.57■□□□□ 0.4
CDCP1-203ENST00000490471 FBXO31Q5XUX0 539 aaPredicted RBP17.57■□□□□ 0.4
CDCP1-203ENST00000490471 TCOF1Q13428 1488 aaKnown RBP17.56■□□□□ 0.4
CDCP1-203ENST00000490471 DNMT1P26358 1616 aaKnown RBP17.55■□□□□ 0.4
CDCP1-203ENST00000490471 SHANK2Q9UPX8 1470 aa17.55■□□□□ 0.4
CDCP1-203ENST00000490471 RNF17Q9BXT8 1623 aaKnown RBP17.54■□□□□ 0.4
CDCP1-203ENST00000490471 PTPN23Q9H3S7 1636 aa17.54■□□□□ 0.4
CDCP1-203ENST00000490471 ANKRD30AQ9BXX3 1397 aa17.53■□□□□ 0.4
CDCP1-203ENST00000490471 RRP7BPQ9NSQ0 103 aa17.53■□□□□ 0.4
CDCP1-203ENST00000490471 LTBP4Q8N2S1 1624 aa17.53■□□□□ 0.4
CDCP1-203ENST00000490471 ERBINQ96RT1 1412 aa17.53■□□□□ 0.4
CDCP1-203ENST00000490471 UGGT1Q9NYU2 1555 aa17.53■□□□□ 0.4
CDCP1-203ENST00000490471 KIF15Q9NS87 1388 aa17.53■□□□□ 0.4
CDCP1-203ENST00000490471 ZNF335Q9H4Z2 1342 aaPredicted RBP17.51■□□□□ 0.39
CDCP1-203ENST00000490471 FGD6Q6ZV73 1430 aa17.5■□□□□ 0.39
CDCP1-203ENST00000490471 POLR1AO95602 1720 aaPredicted RBP17.5■□□□□ 0.39
CDCP1-203ENST00000490471 ABCC5O15440 1437 aa17.49■□□□□ 0.39
CDCP1-203ENST00000490471 DAPK1P53355 1430 aa17.49■□□□□ 0.39
CDCP1-203ENST00000490471 ABCC3O15438 1527 aa17.49■□□□□ 0.39
CDCP1-203ENST00000490471 UBAP1LF5GYI3 381 aa17.49■□□□□ 0.39
CDCP1-203ENST00000490471 GRWD1Q9BQ67 446 aaKnown RBP eCLIP17.49■□□□□ 0.39
CDCP1-203ENST00000490471 STAG3Q9UJ98 1225 aa17.49■□□□□ 0.39
CDCP1-203ENST00000490471 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP17.48■□□□□ 0.39
CDCP1-203ENST00000490471 TOM1O60784 492 aa17.47■□□□□ 0.39
CDCP1-203ENST00000490471 EID1Q9Y6B2 187 aa17.47■□□□□ 0.39
CDCP1-203ENST00000490471 CROCC2H7BZ55 1655 aa17.47■□□□□ 0.39
CDCP1-203ENST00000490471 CPS1P31327 1500 aa17.47■□□□□ 0.39
CDCP1-203ENST00000490471 SPATA31D1Q6ZQQ2 1576 aa17.46■□□□□ 0.39
CDCP1-203ENST00000490471 FAM50AQ14320 339 aaKnown RBP17.46■□□□□ 0.39
CDCP1-203ENST00000490471 CHIC2Q9UKJ5 165 aa17.45■□□□□ 0.38
CDCP1-203ENST00000490471 NPHP4O75161 1426 aaPredicted RBP17.45■□□□□ 0.38
CDCP1-203ENST00000490471 ARHGAP31Q2M1Z3 1444 aa17.45■□□□□ 0.38
CDCP1-203ENST00000490471 ERVK-7P63135 1459 aa17.44■□□□□ 0.38
CDCP1-203ENST00000490471 DEPDC5O75140 1603 aa17.44■□□□□ 0.38
CDCP1-203ENST00000490471 MED14O60244 1454 aa17.43■□□□□ 0.38
CDCP1-203ENST00000490471 CEP152O94986 1710 aa17.42■□□□□ 0.38
CDCP1-203ENST00000490471 PRDM15P57071 1507 aaPredicted RBP17.42■□□□□ 0.38
CDCP1-203ENST00000490471 CFAP65Q6ZU64 1925 aaKnown RBP17.41■□□□□ 0.38
CDCP1-203ENST00000490471 DISP3Q9P2K9 1392 aa17.4■□□□□ 0.38
CDCP1-203ENST00000490471 HDGFP51858 240 aaKnown RBP17.39■□□□□ 0.37
CDCP1-203ENST00000490471 TXNDC2Q86VQ3 553 aa17.39■□□□□ 0.37
CDCP1-203ENST00000490471 MROH1Q8NDA8 1641 aa17.39■□□□□ 0.37
CDCP1-203ENST00000490471 NEURL4Q96JN8 1562 aa17.37■□□□□ 0.37
CDCP1-203ENST00000490471 IQGAP1P46940 1657 aa17.37■□□□□ 0.37
CDCP1-203ENST00000490471 SLC52A1Q9NWF4 448 aa17.36■□□□□ 0.37
CDCP1-203ENST00000490471 ADGRL2O95490 1459 aa17.36■□□□□ 0.37
CDCP1-203ENST00000490471 SCAF11Q99590 1463 aaKnown RBP17.35■□□□□ 0.37
CDCP1-203ENST00000490471 LMTK2Q8IWU2 1503 aa17.34■□□□□ 0.37
CDCP1-203ENST00000490471 UBR1Q8IWV7 1749 aa17.34■□□□□ 0.37
CDCP1-203ENST00000490471 ANKRD50Q9ULJ7 1429 aa17.34■□□□□ 0.37
CDCP1-203ENST00000490471 PIP4K2BP78356 416 aa17.33■□□□□ 0.36
CDCP1-203ENST00000490471 KDM5AP29375 1690 aaKnown RBP17.31■□□□□ 0.36
CDCP1-203ENST00000490471 SLIT1O75093 1534 aa17.31■□□□□ 0.36
CDCP1-203ENST00000490471 RPRD2Q5VT52 1461 aaKnown RBP17.31■□□□□ 0.36
CDCP1-203ENST00000490471 BCANQ96GW7 911 aa17.3■□□□□ 0.36
CDCP1-203ENST00000490471 TMEM2Q9UHN6 1383 aa17.29■□□□□ 0.36
CDCP1-203ENST00000490471 VWDEQ8N2E2 1590 aa17.29■□□□□ 0.36
CDCP1-203ENST00000490471 IDI1Q13907 227 aa17.29■□□□□ 0.36
CDCP1-203ENST00000490471 ARHGAP23Q9P227 1491 aa17.29■□□□□ 0.36
CDCP1-203ENST00000490471 EFCAB6Q5THR3 1501 aa17.28■□□□□ 0.36
CDCP1-203ENST00000490471 NPM3O75607 178 aaKnown RBP17.28■□□□□ 0.36
CDCP1-203ENST00000490471 SYNMO15061 1565 aa17.28■□□□□ 0.36
CDCP1-203ENST00000490471 ROCK1Q13464 1354 aa17.28■□□□□ 0.36
CDCP1-203ENST00000490471 PIK3C2BO00750 1634 aa17.27■□□□□ 0.36
CDCP1-203ENST00000490471 LTKP29376 864 aa17.26■□□□□ 0.35
CDCP1-203ENST00000490471 PPP1R15AO75807 674 aaPredicted RBP17.25■□□□□ 0.35
CDCP1-203ENST00000490471 ABCF1Q8NE71 845 aaKnown RBP eCLIP17.25■□□□□ 0.35
Retrieved 100 of 20,778 RNA–protein pairs in 33.9 ms