RNA–Protein interactions for RNA: ENST00000490406.1

SERBP1-207, Transcript of SERPINE1 mRNA binding protein 1, humanhuman

TSL 5

Gene SERBP1, Length 624 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SERBP1-207ENST00000490406 KIAA1107Q9UPP5 1409 aa19.24■□□□□ 0.67
SERBP1-207ENST00000490406 WASHC2CQ9Y4E1 1318 aa19.24■□□□□ 0.67
SERBP1-207ENST00000490406 ALKQ9UM73 1620 aa19.23■□□□□ 0.67
SERBP1-207ENST00000490406 CFDP1Q9UEE9 299 aaPredicted RBP19.23■□□□□ 0.67
SERBP1-207ENST00000490406 FAM135BQ49AJ0 1406 aa19.23■□□□□ 0.67
SERBP1-207ENST00000490406 NLRP1Q9C000 1473 aa19.22■□□□□ 0.67
SERBP1-207ENST00000490406 RNF17Q9BXT8 1623 aaKnown RBP19.22■□□□□ 0.67
SERBP1-207ENST00000490406 ATP7AQ04656 1500 aa19.22■□□□□ 0.67
SERBP1-207ENST00000490406 MIA2Q96PC5 1412 aa19.21■□□□□ 0.67
SERBP1-207ENST00000490406 DEPDC5O75140 1603 aa19.21■□□□□ 0.67
SERBP1-207ENST00000490406 UPF1Q92900 1129 aaKnown RBP eCLIP19.2■□□□□ 0.66
SERBP1-207ENST00000490406 UGGT1Q9NYU2 1555 aa19.19■□□□□ 0.66
SERBP1-207ENST00000490406 CCDC18Q5T9S5 1454 aa19.19■□□□□ 0.66
SERBP1-207ENST00000490406 PLXNC1O60486 1568 aa19.19■□□□□ 0.66
SERBP1-207ENST00000490406 KIF3BO15066 747 aa19.18■□□□□ 0.66
SERBP1-207ENST00000490406 FOXD1Q16676 465 aa19.18■□□□□ 0.66
SERBP1-207ENST00000490406 SYNMO15061 1565 aa19.17■□□□□ 0.66
SERBP1-207ENST00000490406 PZPP20742 1482 aa19.16■□□□□ 0.66
SERBP1-207ENST00000490406 SYCP2Q9BX26 1530 aa19.16■□□□□ 0.66
SERBP1-207ENST00000490406 ZNF772Q68DY9 489 aaPredicted RBP19.16■□□□□ 0.66
SERBP1-207ENST00000490406 DHX29Q7Z478 1369 aaKnown RBP19.16■□□□□ 0.66
SERBP1-207ENST00000490406 IQGAP1P46940 1657 aa19.14■□□□□ 0.65
SERBP1-207ENST00000490406 ARHGAP35Q9NRY4 1499 aa19.12■□□□□ 0.65
SERBP1-207ENST00000490406 ADGBQ8N7X0 1667 aa19.11■□□□□ 0.65
SERBP1-207ENST00000490406 EID1Q9Y6B2 187 aa19.11■□□□□ 0.65
SERBP1-207ENST00000490406 GPATCH8Q9UKJ3 1502 aaKnown RBP19.1■□□□□ 0.65
SERBP1-207ENST00000490406 RTEL1-TNFRSF6BF6WH68 1400 aa19.1■□□□□ 0.65
SERBP1-207ENST00000490406 CDC42BPAQ5VT25 1732 aa19.1■□□□□ 0.65
SERBP1-207ENST00000490406 CCNB3Q8WWL7 1395 aa19.09■□□□□ 0.65
SERBP1-207ENST00000490406 RSPH4AQ5TD94 716 aa19.09■□□□□ 0.65
SERBP1-207ENST00000490406 INO80Q9ULG1 1556 aaPredicted RBP19.09■□□□□ 0.65
SERBP1-207ENST00000490406 KDM5DQ9BY66 1539 aa19.09■□□□□ 0.65
SERBP1-207ENST00000490406 MEX3CQ5U5Q3 659 aaKnown RBP19.08■□□□□ 0.64
SERBP1-207ENST00000490406 TXNDC2Q86VQ3 553 aa19.07■□□□□ 0.64
SERBP1-207ENST00000490406 CASKIN1Q8WXD9 1431 aa19.07■□□□□ 0.64
SERBP1-207ENST00000490406 JCADQ9P266 1359 aa19.06■□□□□ 0.64
SERBP1-207ENST00000490406 RXRBP28702 533 aa19.06■□□□□ 0.64
SERBP1-207ENST00000490406 TRIM52Q96A61 297 aa19.06■□□□□ 0.64
SERBP1-207ENST00000490406 CEP162Q5TB80 1403 aa19.04■□□□□ 0.64
SERBP1-207ENST00000490406 SPATA31A6Q5VVP1 1343 aa19.02■□□□□ 0.64
SERBP1-207ENST00000490406 PROSER2Q86WR7 435 aaPredicted RBP19.02■□□□□ 0.64
SERBP1-207ENST00000490406 LRRC9Q6ZRR7 1453 aa19.02■□□□□ 0.63
SERBP1-207ENST00000490406 STRCP1A6NGW2 1772 aa19.01■□□□□ 0.63
SERBP1-207ENST00000490406 SCAF11Q99590 1463 aaKnown RBP19■□□□□ 0.63
SERBP1-207ENST00000490406 KCNA6P17658 529 aa18.99■□□□□ 0.63
SERBP1-207ENST00000490406 SLAIN2Q9P270 581 aa18.99■□□□□ 0.63
SERBP1-207ENST00000490406 TMEM94Q12767 1356 aa18.98■□□□□ 0.63
SERBP1-207ENST00000490406 TSPY4P0CV99 314 aa18.98■□□□□ 0.63
SERBP1-207ENST00000490406 TSPY10P0CW01 314 aa18.98■□□□□ 0.63
SERBP1-207ENST00000490406 SETD1AO15047 1707 aaKnown RBP18.97■□□□□ 0.63
SERBP1-207ENST00000490406 LRRIQ1Q96JM4 1722 aa18.97■□□□□ 0.63
SERBP1-207ENST00000490406 LTKP29376 864 aa18.96■□□□□ 0.63
SERBP1-207ENST00000490406 STAG3Q9UJ98 1225 aa18.96■□□□□ 0.63
SERBP1-207ENST00000490406 MSH6P52701 1360 aa18.95■□□□□ 0.62
SERBP1-207ENST00000490406 MTUS2Q5JR59 1369 aa18.93■□□□□ 0.62
SERBP1-207ENST00000490406 ZRANB1Q9UGI0 708 aa18.93■□□□□ 0.62
SERBP1-207ENST00000490406 ROBO1Q9Y6N7 1651 aa18.92■□□□□ 0.62
SERBP1-207ENST00000490406 ZNF644Q9H582 1327 aaPredicted RBP18.92■□□□□ 0.62
SERBP1-207ENST00000490406 FYCO1Q9BQS8 1478 aa18.91■□□□□ 0.62
SERBP1-207ENST00000490406 CDK12Q9NYV4 1490 aaPredicted RBP18.91■□□□□ 0.62
SERBP1-207ENST00000490406 MBD5Q9P267 1494 aa18.91■□□□□ 0.62
SERBP1-207ENST00000490406 FGD6Q6ZV73 1430 aa18.91■□□□□ 0.62
SERBP1-207ENST00000490406 ZC3H13Q5T200 1668 aaKnown RBP18.89■□□□□ 0.61
SERBP1-207ENST00000490406 SLIT1O75093 1534 aa18.86■□□□□ 0.61
SERBP1-207ENST00000490406 BCANQ96GW7 911 aa18.86■□□□□ 0.61
SERBP1-207ENST00000490406 PHLPP1O60346 1717 aa18.86■□□□□ 0.61
SERBP1-207ENST00000490406 ERVK-7P63135 1459 aa18.85■□□□□ 0.61
SERBP1-207ENST00000490406 ARHGAP23Q9P227 1491 aa18.85■□□□□ 0.61
SERBP1-207ENST00000490406 XIRP1Q702N8 1843 aaKnown RBP18.85■□□□□ 0.61
SERBP1-207ENST00000490406 CCDC141Q6ZP82 1450 aa18.84■□□□□ 0.61
SERBP1-207ENST00000490406 NUTM2BA6NNL0 878 aaPredicted RBP18.84■□□□□ 0.61
SERBP1-207ENST00000490406 NUTM2EB1AL46 878 aaPredicted RBP18.84■□□□□ 0.61
SERBP1-207ENST00000490406 NUTM2DQ5VT03 806 aaPredicted RBP18.84■□□□□ 0.61
SERBP1-207ENST00000490406 NUTM2AQ8IVF1 878 aaPredicted RBP18.84■□□□□ 0.61
SERBP1-207ENST00000490406 TMEM2Q9UHN6 1383 aa18.82■□□□□ 0.6
SERBP1-207ENST00000490406 RBM6P78332 1123 aaKnown RBP18.82■□□□□ 0.6
SERBP1-207ENST00000490406 RBM33Q96EV2 1170 aaKnown RBP18.82■□□□□ 0.6
SERBP1-207ENST00000490406 NGLY1Q96IV0 654 aa18.82■□□□□ 0.6
SERBP1-207ENST00000490406 SLC26A8Q96RN1 970 aa18.82■□□□□ 0.6
SERBP1-207ENST00000490406 ABCC3O15438 1527 aa18.81■□□□□ 0.6
SERBP1-207ENST00000490406 PRDM15P57071 1507 aaPredicted RBP18.81■□□□□ 0.6
SERBP1-207ENST00000490406 HDGFP51858 240 aaKnown RBP18.81■□□□□ 0.6
SERBP1-207ENST00000490406 UBR1Q8IWV7 1749 aa18.8■□□□□ 0.6
SERBP1-207ENST00000490406 C14orf37Q86TY3 774 aa18.8■□□□□ 0.6
SERBP1-207ENST00000490406 CADPS2Q86UW7 1296 aa18.8■□□□□ 0.6
SERBP1-207ENST00000490406 NKTRP30414 1462 aaKnown RBP18.79■□□□□ 0.6
SERBP1-207ENST00000490406 NCOA2Q15596 1464 aa18.79■□□□□ 0.6
SERBP1-207ENST00000490406 QTRT2Q9H974 415 aaKnown RBP18.79■□□□□ 0.6
SERBP1-207ENST00000490406 VPS8Q8N3P4 1428 aa18.78■□□□□ 0.6
SERBP1-207ENST00000490406 CCDC125Q86Z20 511 aa18.78■□□□□ 0.6
SERBP1-207ENST00000490406 ATF3P18847 181 aa18.77■□□□□ 0.6
SERBP1-207ENST00000490406 AFF2P51816 1311 aa18.76■□□□□ 0.59
SERBP1-207ENST00000490406 NCOA3Q9Y6Q9 1424 aa18.76■□□□□ 0.59
SERBP1-207ENST00000490406 ATAD2Q6PL18 1390 aa18.76■□□□□ 0.59
SERBP1-207ENST00000490406 MAP3K1Q13233 1512 aa18.75■□□□□ 0.59
SERBP1-207ENST00000490406 LRP6O75581 1613 aa18.74■□□□□ 0.59
SERBP1-207ENST00000490406 C19orf44Q9H6X5 657 aa18.73■□□□□ 0.59
SERBP1-207ENST00000490406 ARHGAP31Q2M1Z3 1444 aa18.72■□□□□ 0.59
SERBP1-207ENST00000490406 LRRC59Q96AG4 307 aaKnown RBP18.71■□□□□ 0.59
SERBP1-207ENST00000490406 COL16A1Q07092 1604 aaPredicted RBP18.71■□□□□ 0.58
Retrieved 100 of 20,778 RNA–protein pairs in 15.8 ms