RNA–Protein interactions for RNA: ENST00000490360.1

UPK3B-205, Transcript of uroplakin 3B, humanhuman

TSL 2

Gene UPK3B, Length 524 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UPK3B-205ENST00000490360 CPS1P31327 1500 aa31.77■■■□□ 2.68
UPK3B-205ENST00000490360 RSPH4AQ5TD94 716 aa31.77■■■□□ 2.68
UPK3B-205ENST00000490360 POLR1AO95602 1720 aaPredicted RBP31.77■■■□□ 2.68
UPK3B-205ENST00000490360 TNRQ92752 1358 aa31.76■■■□□ 2.67
UPK3B-205ENST00000490360 PZPP20742 1482 aa31.74■■■□□ 2.67
UPK3B-205ENST00000490360 TOM1O60784 492 aa31.74■■■□□ 2.67
UPK3B-205ENST00000490360 KIF3BO15066 747 aa31.73■■■□□ 2.67
UPK3B-205ENST00000490360 KDM5DQ9BY66 1539 aa31.73■■■□□ 2.67
UPK3B-205ENST00000490360 CCDC141Q6ZP82 1450 aa31.71■■■□□ 2.67
UPK3B-205ENST00000490360 SHANK2Q9UPX8 1470 aa31.7■■■□□ 2.66
UPK3B-205ENST00000490360 ANKLE2Q86XL3 938 aa31.69■■■□□ 2.66
UPK3B-205ENST00000490360 WASHC2CQ9Y4E1 1318 aa31.69■■■□□ 2.66
UPK3B-205ENST00000490360 THEMISQ8N1K5 641 aaPredicted RBP31.68■■■□□ 2.66
UPK3B-205ENST00000490360 NEURL4Q96JN8 1562 aa31.68■■■□□ 2.66
UPK3B-205ENST00000490360 FBXO31Q5XUX0 539 aaPredicted RBP31.67■■■□□ 2.66
UPK3B-205ENST00000490360 NLRP1Q9C000 1473 aa31.66■■■□□ 2.66
UPK3B-205ENST00000490360 SCAF1Q9H7N4 1312 aaKnown RBP31.65■■■□□ 2.66
UPK3B-205ENST00000490360 HSPA1LP34931 641 aa31.63■■■□□ 2.65
UPK3B-205ENST00000490360 MIA2Q96PC5 1412 aa31.63■■■□□ 2.65
UPK3B-205ENST00000490360 PIP4K2BP78356 416 aa31.62■■■□□ 2.65
UPK3B-205ENST00000490360 CAMSAP2Q08AD1 1489 aa31.61■■■□□ 2.65
UPK3B-205ENST00000490360 DEPDC5O75140 1603 aa31.6■■■□□ 2.65
UPK3B-205ENST00000490360 MED14O60244 1454 aa31.59■■■□□ 2.65
UPK3B-205ENST00000490360 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP31.59■■■□□ 2.65
UPK3B-205ENST00000490360 UGGT1Q9NYU2 1555 aa31.59■■■□□ 2.65
UPK3B-205ENST00000490360 TSPY4P0CV99 314 aa31.58■■■□□ 2.65
UPK3B-205ENST00000490360 TSPY10P0CW01 314 aa31.58■■■□□ 2.65
UPK3B-205ENST00000490360 NCOA2Q15596 1464 aa31.58■■■□□ 2.65
UPK3B-205ENST00000490360 MED1Q15648 1581 aaPredicted RBP31.57■■■□□ 2.64
UPK3B-205ENST00000490360 ARHGEF5Q12774 1597 aa31.56■■■□□ 2.64
UPK3B-205ENST00000490360 VWDEQ8N2E2 1590 aa31.56■■■□□ 2.64
UPK3B-205ENST00000490360 NPHP4O75161 1426 aaPredicted RBP31.55■■■□□ 2.64
UPK3B-205ENST00000490360 IQGAP1P46940 1657 aa31.48■■■□□ 2.63
UPK3B-205ENST00000490360 ZC3H13Q5T200 1668 aaKnown RBP31.48■■■□□ 2.63
UPK3B-205ENST00000490360 RNF17Q9BXT8 1623 aaKnown RBP31.47■■■□□ 2.63
UPK3B-205ENST00000490360 ABCC3O15438 1527 aa31.42■■■□□ 2.62
UPK3B-205ENST00000490360 PHF23Q9BUL5 403 aaPredicted RBP31.41■■■□□ 2.62
UPK3B-205ENST00000490360 MAST1Q9Y2H9 1570 aa31.41■■■□□ 2.62
UPK3B-205ENST00000490360 EIF2AK4Q9P2K8 1649 aaKnown RBP31.41■■■□□ 2.62
UPK3B-205ENST00000490360 SYNMO15061 1565 aa31.39■■■□□ 2.62
UPK3B-205ENST00000490360 ALKQ9UM73 1620 aa31.39■■■□□ 2.62
UPK3B-205ENST00000490360 ERVK-7P63135 1459 aa31.37■■■□□ 2.61
UPK3B-205ENST00000490360 LRRC7Q96NW7 1537 aa31.37■■■□□ 2.61
UPK3B-205ENST00000490360 STRCP1A6NGW2 1772 aa31.33■■■□□ 2.61
UPK3B-205ENST00000490360 LRRC9Q6ZRR7 1453 aa31.32■■■□□ 2.6
UPK3B-205ENST00000490360 UBR1Q8IWV7 1749 aa31.29■■■□□ 2.6
UPK3B-205ENST00000490360 SCAF11Q99590 1463 aaKnown RBP31.28■■■□□ 2.6
UPK3B-205ENST00000490360 MROH1Q8NDA8 1641 aa31.27■■■□□ 2.6
UPK3B-205ENST00000490360 DUOX2Q9NRD8 1548 aa31.26■■■□□ 2.59
UPK3B-205ENST00000490360 CFAP65Q6ZU64 1925 aaKnown RBP31.25■■■□□ 2.59
UPK3B-205ENST00000490360 MYOM3Q5VTT5 1437 aa31.24■■■□□ 2.59
UPK3B-205ENST00000490360 CEP152O94986 1710 aa31.24■■■□□ 2.59
UPK3B-205ENST00000490360 SLIT1O75093 1534 aa31.24■■■□□ 2.59
UPK3B-205ENST00000490360 VPS8Q8N3P4 1428 aa31.24■■■□□ 2.59
UPK3B-205ENST00000490360 ARHGAP31Q2M1Z3 1444 aa31.23■■■□□ 2.59
UPK3B-205ENST00000490360 ARHGAP23Q9P227 1491 aa31.22■■■□□ 2.59
UPK3B-205ENST00000490360 MAP3K1Q13233 1512 aa31.22■■■□□ 2.59
UPK3B-205ENST00000490360 TXNDC2Q86VQ3 553 aa31.21■■■□□ 2.59
UPK3B-205ENST00000490360 EID1Q9Y6B2 187 aa31.21■■■□□ 2.59
UPK3B-205ENST00000490360 LTKP29376 864 aa31.17■■■□□ 2.58
UPK3B-205ENST00000490360 PRDM15P57071 1507 aaPredicted RBP31.17■■■□□ 2.58
UPK3B-205ENST00000490360 ERBINQ96RT1 1412 aa31.15■■■□□ 2.58
UPK3B-205ENST00000490360 SENP3Q9H4L4 574 aaPredicted RBP31.14■■■□□ 2.58
UPK3B-205ENST00000490360 KIF15Q9NS87 1388 aa31.13■■■□□ 2.57
UPK3B-205ENST00000490360 KANK4Q5T7N3 995 aaPredicted RBP31.1■■■□□ 2.57
UPK3B-205ENST00000490360 TMEM2Q9UHN6 1383 aa31.09■■■□□ 2.57
UPK3B-205ENST00000490360 XIRP1Q702N8 1843 aaKnown RBP31.09■■■□□ 2.57
UPK3B-205ENST00000490360 KDM5AP29375 1690 aaKnown RBP31.09■■■□□ 2.57
UPK3B-205ENST00000490360 FAM135BQ49AJ0 1406 aa31.08■■■□□ 2.57
UPK3B-205ENST00000490360 KANK1Q14678 1352 aa31.08■■■□□ 2.57
UPK3B-205ENST00000490360 STAG3Q9UJ98 1225 aa31.07■■■□□ 2.56
UPK3B-205ENST00000490360 PIK3C2BO00750 1634 aa31.06■■■□□ 2.56
UPK3B-205ENST00000490360 CROCC2H7BZ55 1655 aa31.05■■■□□ 2.56
UPK3B-205ENST00000490360 RRP7BPQ9NSQ0 103 aa31.03■■■□□ 2.56
UPK3B-205ENST00000490360 ABCC5O15440 1437 aa31.02■■■□□ 2.56
UPK3B-205ENST00000490360 RGS17Q9UGC6 210 aaPredicted RBP31.02■■■□□ 2.56
UPK3B-205ENST00000490360 GRWD1Q9BQ67 446 aaKnown RBP eCLIP31.01■■■□□ 2.55
UPK3B-205ENST00000490360 EFCAB6Q5THR3 1501 aa31.01■■■□□ 2.55
UPK3B-205ENST00000490360 KCNA6P17658 529 aa31■■■□□ 2.55
UPK3B-205ENST00000490360 TMEM94Q12767 1356 aa30.98■■■□□ 2.55
UPK3B-205ENST00000490360 LMTK2Q8IWU2 1503 aa30.98■■■□□ 2.55
UPK3B-205ENST00000490360 PTPN23Q9H3S7 1636 aa30.97■■■□□ 2.55
UPK3B-205ENST00000490360 IDI1Q13907 227 aa30.95■■■□□ 2.55
UPK3B-205ENST00000490360 DAPK1P53355 1430 aa30.94■■■□□ 2.54
UPK3B-205ENST00000490360 PROSER2Q86WR7 435 aaPredicted RBP30.93■■■□□ 2.54
UPK3B-205ENST00000490360 TET3O43151 1660 aa30.93■■■□□ 2.54
UPK3B-205ENST00000490360 ANKRD30AQ9BXX3 1397 aa30.92■■■□□ 2.54
UPK3B-205ENST00000490360 APLP2Q06481 763 aa30.91■■■□□ 2.54
UPK3B-205ENST00000490360 NKTRP30414 1462 aaKnown RBP30.9■■■□□ 2.54
UPK3B-205ENST00000490360 SLC52A1Q9NWF4 448 aa30.9■■■□□ 2.54
UPK3B-205ENST00000490360 ROBO1Q9Y6N7 1651 aa30.9■■■□□ 2.54
UPK3B-205ENST00000490360 SLC26A8Q96RN1 970 aa30.88■■■□□ 2.53
UPK3B-205ENST00000490360 NOS1P29475 1434 aa30.88■■■□□ 2.53
UPK3B-205ENST00000490360 LOC105371045A0A1W2PR82 267 aa30.87■■■□□ 2.53
UPK3B-205ENST00000490360 ADGRB3O60242 1522 aa30.86■■■□□ 2.53
UPK3B-205ENST00000490360 NWD1Q149M9 1564 aa30.85■■■□□ 2.53
UPK3B-205ENST00000490360 FGD6Q6ZV73 1430 aa30.85■■■□□ 2.53
UPK3B-205ENST00000490360 MSH6P52701 1360 aa30.84■■■□□ 2.53
UPK3B-205ENST00000490360 POTEAQ6S8J7 498 aa30.82■■■□□ 2.52
UPK3B-205ENST00000490360 HDGFP51858 240 aaKnown RBP30.8■■■□□ 2.52
Retrieved 100 of 20,778 RNA–protein pairs in 27.3 ms