RNA–Protein interactions for RNA: ENST00000490308.1

EPB41-212, Transcript of erythrocyte membrane protein band 4.1, humanhuman

TSL 3

Gene EPB41, Length 354 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
EPB41-212ENST00000490308 BRD1O95696 1058 aa4.22□□□□□ -1.73
EPB41-212ENST00000490308 TTLL12Q14166 644 aaPredicted RBP4.22□□□□□ -1.73
EPB41-212ENST00000490308 MAMSTRQ6ZN01 415 aa4.22□□□□□ -1.73
EPB41-212ENST00000490308 ZNF777Q9ULD5 760 aaPredicted RBP4.22□□□□□ -1.73
EPB41-212ENST00000490308 LOC105371045A0A1W2PR82 267 aa4.21□□□□□ -1.74
EPB41-212ENST00000490308 SPDYE5A6NIY4 337 aa4.21□□□□□ -1.74
EPB41-212ENST00000490308 TTLL13PA6NNM8 815 aa4.21□□□□□ -1.74
EPB41-212ENST00000490308 IRF6O14896 467 aa4.21□□□□□ -1.74
EPB41-212ENST00000490308 EIF5BO60841 1220 aaKnown RBP4.21□□□□□ -1.74
EPB41-212ENST00000490308 SH3D19Q5HYK7 790 aa4.21□□□□□ -1.74
EPB41-212ENST00000490308 MS4A4AQ96JQ5 239 aa4.21□□□□□ -1.74
EPB41-212ENST00000490308 CRISPLD2Q9H0B8 497 aa4.21□□□□□ -1.74
EPB41-212ENST00000490308 USTQ9Y2C2 406 aa4.21□□□□□ -1.74
EPB41-212ENST00000490308 TIE1P35590 1138 aa4.2□□□□□ -1.74
EPB41-212ENST00000490308 HIC1Q14526 733 aa4.2□□□□□ -1.74
EPB41-212ENST00000490308 PARP9Q8IXQ6 854 aa4.2□□□□□ -1.74
EPB41-212ENST00000490308 RETREG2Q8NC44 543 aa4.2□□□□□ -1.74
EPB41-212ENST00000490308 CCDC102AQ96A19 550 aa4.2□□□□□ -1.74
EPB41-212ENST00000490308 SCUBE2Q9NQ36 999 aa4.2□□□□□ -1.74
EPB41-212ENST00000490308 ATP1B4Q9UN42 357 aaPredicted RBP4.2□□□□□ -1.74
EPB41-212ENST00000490308 NCKAP5LQ9HCH0 1330 aa4.2□□□□□ -1.74
EPB41-212ENST00000490308 GNPATO15228 680 aa4.19□□□□□ -1.74
EPB41-212ENST00000490308 IGSF3O75054 1194 aa4.19□□□□□ -1.74
EPB41-212ENST00000490308 SKIV2LQ15477 1246 aaKnown RBP4.19□□□□□ -1.74
EPB41-212ENST00000490308 CCDC27Q2M243 656 aa4.19□□□□□ -1.74
EPB41-212ENST00000490308 FNBP4Q8N3X1 1017 aaPredicted RBP4.19□□□□□ -1.74
EPB41-212ENST00000490308 BANK1Q8NDB2 785 aa4.19□□□□□ -1.74
EPB41-212ENST00000490308 TRIM35Q9UPQ4 493 aa4.19□□□□□ -1.74
EPB41-212ENST00000490308 ZNF330Q9Y3S2 320 aaPredicted RBP4.19□□□□□ -1.74
EPB41-212ENST00000490308 FCHSD2O94868 740 aa4.18□□□□□ -1.74
EPB41-212ENST00000490308 CSB-PGBD3P0DP91 1061 aa4.18□□□□□ -1.74
EPB41-212ENST00000490308 MLLT3P42568 568 aaPredicted RBP4.18□□□□□ -1.74
EPB41-212ENST00000490308 PDIA6Q15084 440 aa4.18□□□□□ -1.74
EPB41-212ENST00000490308 DIXDC1Q155Q3 683 aa4.18□□□□□ -1.74
EPB41-212ENST00000490308 B4GALNT3Q6L9W6 998 aa4.18□□□□□ -1.74
EPB41-212ENST00000490308 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP4.18□□□□□ -1.74
EPB41-212ENST00000490308 USP35Q9P2H5 1018 aa4.18□□□□□ -1.74
EPB41-212ENST00000490308 NUTM2FA1L443 756 aa4.17□□□□□ -1.74
EPB41-212ENST00000490308 ERCC3P19447 782 aa4.17□□□□□ -1.74
EPB41-212ENST00000490308 CLCN1P35523 988 aa4.17□□□□□ -1.74
EPB41-212ENST00000490308 FOXD4L5Q5VV16 416 aaPredicted RBP4.17□□□□□ -1.74
EPB41-212ENST00000490308 CDAN1Q8IWY9 1227 aa4.17□□□□□ -1.74
EPB41-212ENST00000490308 FOXD4L4Q8WXT5 416 aaPredicted RBP4.17□□□□□ -1.74
EPB41-212ENST00000490308 BCL11AQ9H165 835 aa4.17□□□□□ -1.74
EPB41-212ENST00000490308 TMEM259Q4ZIN3 620 aa4.16□□□□□ -1.74
EPB41-212ENST00000490308 PPP1R15BQ5SWA1 713 aa4.16□□□□□ -1.74
EPB41-212ENST00000490308 DPY19L2Q6NUT2 758 aa4.16□□□□□ -1.74
EPB41-212ENST00000490308 CALR3Q96L12 384 aaKnown RBP4.16□□□□□ -1.74
EPB41-212ENST00000490308 SOCS7O14512 581 aa4.15□□□□□ -1.75
EPB41-212ENST00000490308 ST18O60284 1047 aa4.15□□□□□ -1.75
EPB41-212ENST00000490308 GIGYF2Q6Y7W6 1299 aaKnown RBP4.15□□□□□ -1.75
EPB41-212ENST00000490308 PBXIP1Q96AQ6 731 aa4.15□□□□□ -1.75
EPB41-212ENST00000490308 IRF5Q13568 498 aa4.14□□□□□ -1.75
EPB41-212ENST00000490308 GPHNQ9NQX3 736 aaPredicted RBP4.14□□□□□ -1.75
EPB41-212ENST00000490308 GPR37O15354 613 aa4.13□□□□□ -1.75
EPB41-212ENST00000490308 SEC24BO95487 1268 aa4.13□□□□□ -1.75
EPB41-212ENST00000490308 SND1Q7KZF4 910 aaKnown RBP eCLIP4.13□□□□□ -1.75
EPB41-212ENST00000490308 PDCD7Q8N8D1 485 aaKnown RBP4.13□□□□□ -1.75
EPB41-212ENST00000490308 COG6Q9Y2V7 657 aa4.13□□□□□ -1.75
EPB41-212ENST00000490308 DPYSL4O14531 572 aa4.12□□□□□ -1.75
EPB41-212ENST00000490308 NCLP19338 710 aaKnown RBP4.12□□□□□ -1.75
EPB41-212ENST00000490308 ILDR1Q86SU0 546 aaPredicted RBP4.12□□□□□ -1.75
EPB41-212ENST00000490308 MICALL2Q8IY33 904 aa4.12□□□□□ -1.75
EPB41-212ENST00000490308 SLAIN1Q8ND83 568 aa4.12□□□□□ -1.75
EPB41-212ENST00000490308 GPCPD1Q9NPB8 672 aa4.12□□□□□ -1.75
EPB41-212ENST00000490308 G3V3G9 751 aa4.11□□□□□ -1.75
EPB41-212ENST00000490308 PLCG2P16885 1265 aa4.11□□□□□ -1.75
EPB41-212ENST00000490308 IRX5P78411 483 aaPredicted RBP4.11□□□□□ -1.75
EPB41-212ENST00000490308 IER5LQ5T953 404 aa4.11□□□□□ -1.75
EPB41-212ENST00000490308 MAP3K9P80192 1104 aa4.1□□□□□ -1.75
EPB41-212ENST00000490308 WASHC4Q2M389 1173 aa4.1□□□□□ -1.75
EPB41-212ENST00000490308 OCEL1Q9H607 264 aa4.1□□□□□ -1.75
EPB41-212ENST00000490308 BOLA1Q9Y3E2 137 aa4.1□□□□□ -1.75
EPB41-212ENST00000490308 RBM47A0AV96 593 aaKnown RBP4.09□□□□□ -1.75
EPB41-212ENST00000490308 GRXCR2A6NFK2 248 aa4.09□□□□□ -1.75
EPB41-212ENST00000490308 TBC1D12O60347 775 aa4.09□□□□□ -1.75
EPB41-212ENST00000490308 MS4A1P11836 297 aa4.09□□□□□ -1.75
EPB41-212ENST00000490308 MMRN1Q13201 1228 aa4.09□□□□□ -1.75
EPB41-212ENST00000490308 SPNS2Q8IVW8 549 aa4.09□□□□□ -1.75
EPB41-212ENST00000490308 TMC2Q8TDI7 906 aa4.09□□□□□ -1.75
EPB41-212ENST00000490308 POM121Q96HA1 1249 aa4.09□□□□□ -1.75
EPB41-212ENST00000490308 SSTR3P32745 418 aaPredicted RBP4.08□□□□□ -1.76
EPB41-212ENST00000490308 PTGER2P43116 358 aa4.08□□□□□ -1.76
EPB41-212ENST00000490308 CLK2P49760 499 aaKnown RBP4.08□□□□□ -1.76
EPB41-212ENST00000490308 DSG2Q14126 1118 aa4.08□□□□□ -1.76
EPB41-212ENST00000490308 CCDC125Q86Z20 511 aa4.08□□□□□ -1.76
EPB41-212ENST00000490308 CCER1Q8TC90 406 aaPredicted RBP4.08□□□□□ -1.76
EPB41-212ENST00000490308 GLMNQ92990 594 aa4.08□□□□□ -1.76
EPB41-212ENST00000490308 BEGAINQ9BUH8 593 aa4.08□□□□□ -1.76
EPB41-212ENST00000490308 GNL3Q9BVP2 549 aaKnown RBP eCLIP4.08□□□□□ -1.76
EPB41-212ENST00000490308 POTEB3A0JP26 581 aa4.07□□□□□ -1.76
EPB41-212ENST00000490308 C2orf72A6NCS6 295 aa4.07□□□□□ -1.76
EPB41-212ENST00000490308 POTEBQ6S5H4 581 aa4.07□□□□□ -1.76
EPB41-212ENST00000490308 ZNF428Q96B54 188 aa4.07□□□□□ -1.76
EPB41-212ENST00000490308 VRTNQ9H8Y1 702 aa4.07□□□□□ -1.76
EPB41-212ENST00000490308 IVNS1ABPQ9Y6Y0 642 aa4.07□□□□□ -1.76
EPB41-212ENST00000490308 OATP04181 439 aa4.06□□□□□ -1.76
EPB41-212ENST00000490308 RFC5P40937 340 aa4.06□□□□□ -1.76
EPB41-212ENST00000490308 FOXK1P85037 733 aa4.06□□□□□ -1.76
EPB41-212ENST00000490308 TSR1Q2NL82 804 aaKnown RBP4.06□□□□□ -1.76
Retrieved 100 of 20,778 RNA–protein pairs in 13.5 ms