RNA–Protein interactions for RNA: ENST00000490305.5

HLA-DOA-205, Transcript of major histocompatibility complex, class II, DO alpha, humanhuman

Gene HLA-DOA, Length 402 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-DOA-205ENST00000490305 DIP2CQ9Y2E4 1556 aa19.37■□□□□ 0.69
HLA-DOA-205ENST00000490305 DEPDC5O75140 1603 aa19.36■□□□□ 0.69
HLA-DOA-205ENST00000490305 BCORL1Q5H9F3 1711 aa19.35■□□□□ 0.69
HLA-DOA-205ENST00000490305 IQGAP3Q86VI3 1631 aa19.35■□□□□ 0.69
HLA-DOA-205ENST00000490305 FAM135AQ9P2D6 1515 aa19.33■□□□□ 0.68
HLA-DOA-205ENST00000490305 KIF3BO15066 747 aa19.32■□□□□ 0.68
HLA-DOA-205ENST00000490305 COL17A1Q9UMD9 1497 aaPredicted RBP19.32■□□□□ 0.68
HLA-DOA-205ENST00000490305 KANK1Q14678 1352 aa19.32■□□□□ 0.68
HLA-DOA-205ENST00000490305 GRWD1Q9BQ67 446 aaKnown RBP eCLIP19.31■□□□□ 0.68
HLA-DOA-205ENST00000490305 RNF17Q9BXT8 1623 aaKnown RBP19.31■□□□□ 0.68
HLA-DOA-205ENST00000490305 YEATS2Q9ULM3 1422 aa19.31■□□□□ 0.68
HLA-DOA-205ENST00000490305 REREQ9P2R6 1566 aa19.31■□□□□ 0.68
HLA-DOA-205ENST00000490305 ATP10AO60312 1499 aa19.3■□□□□ 0.68
HLA-DOA-205ENST00000490305 PRDM15P57071 1507 aaPredicted RBP19.29■□□□□ 0.68
HLA-DOA-205ENST00000490305 PKD2Q13563 968 aa19.28■□□□□ 0.68
HLA-DOA-205ENST00000490305 TIMELESSQ9UNS1 1208 aa19.28■□□□□ 0.68
HLA-DOA-205ENST00000490305 VWDEQ8N2E2 1590 aa19.27■□□□□ 0.68
HLA-DOA-205ENST00000490305 ARHGEF40Q8TER5 1519 aa19.27■□□□□ 0.68
HLA-DOA-205ENST00000490305 MROH1Q8NDA8 1641 aa19.26■□□□□ 0.67
HLA-DOA-205ENST00000490305 ANKRD30BQ9BXX2 1392 aa19.26■□□□□ 0.67
HLA-DOA-205ENST00000490305 AGLP35573 1532 aa19.25■□□□□ 0.67
HLA-DOA-205ENST00000490305 SIN3AQ96ST3 1273 aa19.24■□□□□ 0.67
HLA-DOA-205ENST00000490305 TET3O43151 1660 aa19.24■□□□□ 0.67
HLA-DOA-205ENST00000490305 NEUROD1Q13562 356 aa19.23■□□□□ 0.67
HLA-DOA-205ENST00000490305 FOXD1Q16676 465 aa19.23■□□□□ 0.67
HLA-DOA-205ENST00000490305 LMTK2Q8IWU2 1503 aa19.22■□□□□ 0.67
HLA-DOA-205ENST00000490305 GGT6Q6P531 493 aa19.19■□□□□ 0.66
HLA-DOA-205ENST00000490305 ZC3H13Q5T200 1668 aaKnown RBP19.18■□□□□ 0.66
HLA-DOA-205ENST00000490305 TONSLQ96HA7 1378 aa19.18■□□□□ 0.66
HLA-DOA-205ENST00000490305 E9PCH4 1651 aa19.17■□□□□ 0.66
HLA-DOA-205ENST00000490305 CEP152O94986 1710 aa19.17■□□□□ 0.66
HLA-DOA-205ENST00000490305 RPRD2Q5VT52 1461 aaKnown RBP19.17■□□□□ 0.66
HLA-DOA-205ENST00000490305 PPP6R1Q9UPN7 881 aa19.16■□□□□ 0.66
HLA-DOA-205ENST00000490305 EFCAB6Q5THR3 1501 aa19.15■□□□□ 0.66
HLA-DOA-205ENST00000490305 WASHC2CQ9Y4E1 1318 aa19.14■□□□□ 0.65
HLA-DOA-205ENST00000490305 ABCC3O15438 1527 aa19.14■□□□□ 0.65
HLA-DOA-205ENST00000490305 SPHKAPQ2M3C7 1700 aa19.12■□□□□ 0.65
HLA-DOA-205ENST00000490305 CAMSAP1Q5T5Y3 1602 aa19.11■□□□□ 0.65
HLA-DOA-205ENST00000490305 CCDC144AA2RUR9 1427 aa19.1■□□□□ 0.65
HLA-DOA-205ENST00000490305 PTPRTO14522 1441 aa19.1■□□□□ 0.65
HLA-DOA-205ENST00000490305 SIGLEC1Q9BZZ2 1709 aa19.1■□□□□ 0.65
HLA-DOA-205ENST00000490305 TRPM2O94759 1503 aa19.09■□□□□ 0.65
HLA-DOA-205ENST00000490305 PLA2R1Q13018 1463 aa19.09■□□□□ 0.65
HLA-DOA-205ENST00000490305 ARHGAP31Q2M1Z3 1444 aa19.08■□□□□ 0.65
HLA-DOA-205ENST00000490305 PPP1R15AO75807 674 aaPredicted RBP19.06■□□□□ 0.64
HLA-DOA-205ENST00000490305 ARID4BQ4LE39 1312 aaPredicted RBP19.05■□□□□ 0.64
HLA-DOA-205ENST00000490305 NPATQ14207 1427 aa19.05■□□□□ 0.64
HLA-DOA-205ENST00000490305 CLTCQ00610 1675 aaKnown RBP19.02■□□□□ 0.64
HLA-DOA-205ENST00000490305 CNTLNQ9NXG0 1405 aa19.02■□□□□ 0.64
HLA-DOA-205ENST00000490305 L3MBTL2Q969R5 705 aa19.02■□□□□ 0.64
HLA-DOA-205ENST00000490305 ESF1Q9H501 851 aaKnown RBP19.02■□□□□ 0.64
HLA-DOA-205ENST00000490305 CFAP65Q6ZU64 1925 aaKnown RBP19.01■□□□□ 0.63
HLA-DOA-205ENST00000490305 MLECQ14165 292 aa19■□□□□ 0.63
HLA-DOA-205ENST00000490305 CLTCL1P53675 1640 aa19■□□□□ 0.63
HLA-DOA-205ENST00000490305 NEURL4Q96JN8 1562 aa18.99■□□□□ 0.63
HLA-DOA-205ENST00000490305 NOS1P29475 1434 aa18.99■□□□□ 0.63
HLA-DOA-205ENST00000490305 KIF1BO60333 1816 aa18.98■□□□□ 0.63
HLA-DOA-205ENST00000490305 PREX1Q8TCU6 1659 aa18.97■□□□□ 0.63
HLA-DOA-205ENST00000490305 MROH2AA6NES4 1674 aa18.95■□□□□ 0.62
HLA-DOA-205ENST00000490305 SPATA31E1Q6ZUB1 1445 aa18.93■□□□□ 0.62
HLA-DOA-205ENST00000490305 PIK3C2BO00750 1634 aa18.92■□□□□ 0.62
HLA-DOA-205ENST00000490305 ERVK-7P63135 1459 aa18.92■□□□□ 0.62
HLA-DOA-205ENST00000490305 STAC3Q96MF2 364 aa18.92■□□□□ 0.62
HLA-DOA-205ENST00000490305 SYNMO15061 1565 aa18.92■□□□□ 0.62
HLA-DOA-205ENST00000490305 SLC52A1Q9NWF4 448 aa18.91■□□□□ 0.62
HLA-DOA-205ENST00000490305 ZMYM3Q14202 1370 aa18.91■□□□□ 0.62
HLA-DOA-205ENST00000490305 FER1L4A9Z1Z3 1794 aa18.91■□□□□ 0.62
HLA-DOA-205ENST00000490305 UHRF1BP1Q6BDS2 1440 aa18.91■□□□□ 0.62
HLA-DOA-205ENST00000490305 UGGT1Q9NYU2 1555 aa18.9■□□□□ 0.62
HLA-DOA-205ENST00000490305 DCAF11Q8TEB1 546 aa18.9■□□□□ 0.62
HLA-DOA-205ENST00000490305 SPATA31D1Q6ZQQ2 1576 aa18.89■□□□□ 0.62
HLA-DOA-205ENST00000490305 RGL3Q3MIN7 710 aa18.89■□□□□ 0.61
HLA-DOA-205ENST00000490305 ADGRB3O60242 1522 aa18.88■□□□□ 0.61
HLA-DOA-205ENST00000490305 ZNF316A6NFI3 1004 aaPredicted RBP18.86■□□□□ 0.61
HLA-DOA-205ENST00000490305 FBXO31Q5XUX0 539 aaPredicted RBP18.86■□□□□ 0.61
HLA-DOA-205ENST00000490305 NBPF8Q3BBV2 869 aa18.85■□□□□ 0.61
HLA-DOA-205ENST00000490305 KDM2AQ9Y2K7 1162 aa18.85■□□□□ 0.61
HLA-DOA-205ENST00000490305 RPGRIP1LQ68CZ1 1315 aa18.83■□□□□ 0.61
HLA-DOA-205ENST00000490305 CHGAP10645 457 aaKnown RBP18.83■□□□□ 0.6
HLA-DOA-205ENST00000490305 IDI1Q13907 227 aa18.83■□□□□ 0.6
HLA-DOA-205ENST00000490305 IFT172Q9UG01 1749 aa18.82■□□□□ 0.6
HLA-DOA-205ENST00000490305 PRAG1Q86YV5 1406 aa18.82■□□□□ 0.6
HLA-DOA-205ENST00000490305 ZNF326Q5BKZ1 582 aaKnown RBP18.81■□□□□ 0.6
HLA-DOA-205ENST00000490305 MYOM2P54296 1465 aa18.81■□□□□ 0.6
HLA-DOA-205ENST00000490305 RALGAPBQ86X10 1494 aa18.81■□□□□ 0.6
HLA-DOA-205ENST00000490305 C3P01024 1663 aa18.81■□□□□ 0.6
HLA-DOA-205ENST00000490305 ADAMTSL3P82987 1691 aa18.81■□□□□ 0.6
HLA-DOA-205ENST00000490305 TNRQ92752 1358 aa18.8■□□□□ 0.6
HLA-DOA-205ENST00000490305 TMEM131LA2VDJ0 1609 aa18.79■□□□□ 0.6
HLA-DOA-205ENST00000490305 PPLO60437 1756 aa18.79■□□□□ 0.6
HLA-DOA-205ENST00000490305 MADDQ8WXG6 1647 aa18.78■□□□□ 0.6
HLA-DOA-205ENST00000490305 TRPM1Q7Z4N2 1603 aa18.78■□□□□ 0.6
HLA-DOA-205ENST00000490305 RIMS1Q86UR5 1692 aaKnown RBP18.77■□□□□ 0.6
HLA-DOA-205ENST00000490305 MYO5BQ9ULV0 1848 aa18.77■□□□□ 0.59
HLA-DOA-205ENST00000490305 STAG3Q9UJ98 1225 aa18.76■□□□□ 0.59
HLA-DOA-205ENST00000490305 KDM5AP29375 1690 aaKnown RBP18.76■□□□□ 0.59
HLA-DOA-205ENST00000490305 KIAA1210Q9ULL0 1709 aa18.75■□□□□ 0.59
HLA-DOA-205ENST00000490305 NLRP1Q9C000 1473 aa18.74■□□□□ 0.59
HLA-DOA-205ENST00000490305 EIF4G2P78344 907 aaKnown RBP eCLIP18.74■□□□□ 0.59
HLA-DOA-205ENST00000490305 NEXMIFQ5QGS0 1516 aa18.74■□□□□ 0.59
Retrieved 100 of 20,778 RNA–protein pairs in 31.3 ms