RNA–Protein interactions for RNA: ENST00000490175.5

SNX5-214, Transcript of sorting nexin 5, humanhuman

TSL 1 (best)

Gene SNX5, Length 2,025 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX5-214ENST00000490175 KDM5CP41229 1560 aa22.43■■□□□ 1.18
SNX5-214ENST00000490175 PLA2R1Q13018 1463 aa22.42■■□□□ 1.18
SNX5-214ENST00000490175 NPM1P06748 294 aaKnown RBP eCLIP22.41■■□□□ 1.186e-41■□□□□ 10.1
SNX5-214ENST00000490175 GRWD1Q9BQ67 446 aaKnown RBP eCLIP22.41■■□□□ 1.189e-9■□□□□ 11.1
SNX5-214ENST00000490175 USP47Q96K76 1375 aa22.41■■□□□ 1.18
SNX5-214ENST00000490175 ATP7AQ04656 1500 aa22.4■■□□□ 1.18
SNX5-214ENST00000490175 ADGRL1O94910 1474 aa22.4■■□□□ 1.18
SNX5-214ENST00000490175 C11orf95C9JLR9 678 aaPredicted RBP22.4■■□□□ 1.18
SNX5-214ENST00000490175 AFAP1Q8N556 730 aa22.4■■□□□ 1.18
SNX5-214ENST00000490175 DEPDC5O75140 1603 aa22.39■■□□□ 1.17
SNX5-214ENST00000490175 ZNF326Q5BKZ1 582 aaKnown RBP22.38■■□□□ 1.17
SNX5-214ENST00000490175 KIF7Q2M1P5 1343 aa22.37■■□□□ 1.17
SNX5-214ENST00000490175 ARID4BQ4LE39 1312 aaPredicted RBP22.37■■□□□ 1.17
SNX5-214ENST00000490175 SCAPERQ9BY12 1400 aa22.37■■□□□ 1.17
SNX5-214ENST00000490175 CFAP74Q9C0B2 1584 aa22.36■■□□□ 1.17
SNX5-214ENST00000490175 DCAF11Q8TEB1 546 aa22.35■■□□□ 1.17
SNX5-214ENST00000490175 EIF2AK4Q9P2K8 1649 aaKnown RBP22.35■■□□□ 1.17
SNX5-214ENST00000490175 PRAG1Q86YV5 1406 aa22.32■■□□□ 1.16
SNX5-214ENST00000490175 BCORL1Q5H9F3 1711 aa22.32■■□□□ 1.16
SNX5-214ENST00000490175 TRPM1Q7Z4N2 1603 aa22.31■■□□□ 1.16
SNX5-214ENST00000490175 CARD11Q9BXL7 1154 aa22.31■■□□□ 1.16
SNX5-214ENST00000490175 KDM2AQ9Y2K7 1162 aa22.31■■□□□ 1.16
SNX5-214ENST00000490175 E9PCH4 1651 aa22.31■■□□□ 1.16
SNX5-214ENST00000490175 VWDEQ8N2E2 1590 aa22.3■■□□□ 1.16
SNX5-214ENST00000490175 TET3O43151 1660 aa22.3■■□□□ 1.16
SNX5-214ENST00000490175 A2MP01023 1474 aa22.29■■□□□ 1.16
SNX5-214ENST00000490175 ZNF518AQ6AHZ1 1483 aa22.29■■□□□ 1.16
SNX5-214ENST00000490175 DHX29Q7Z478 1369 aaKnown RBP22.29■■□□□ 1.16
SNX5-214ENST00000490175 LAMC1P11047 1609 aa22.28■■□□□ 1.16
SNX5-214ENST00000490175 KANK1Q14678 1352 aa22.27■■□□□ 1.16
SNX5-214ENST00000490175 CD109Q6YHK3 1445 aa22.27■■□□□ 1.16
SNX5-214ENST00000490175 TRPM2O94759 1503 aa22.27■■□□□ 1.16
SNX5-214ENST00000490175 PRDM15P57071 1507 aaPredicted RBP22.26■■□□□ 1.15
SNX5-214ENST00000490175 ROCK2O75116 1388 aaKnown RBP22.26■■□□□ 1.15
SNX5-214ENST00000490175 KIDINS220Q9ULH0 1771 aa22.26■■□□□ 1.15
SNX5-214ENST00000490175 SPHKAPQ2M3C7 1700 aa22.25■■□□□ 1.15
SNX5-214ENST00000490175 PTPRTO14522 1441 aa22.25■■□□□ 1.15
SNX5-214ENST00000490175 GPRASP1Q5JY77 1395 aa22.24■■□□□ 1.15
SNX5-214ENST00000490175 PRKRIP1Q9H875 184 aaPredicted RBP22.24■■□□□ 1.15
SNX5-214ENST00000490175 RGL3Q3MIN7 710 aa22.22■■□□□ 1.15
SNX5-214ENST00000490175 CEP152O94986 1710 aa22.22■■□□□ 1.15
SNX5-214ENST00000490175 MROH1Q8NDA8 1641 aa22.21■■□□□ 1.15
SNX5-214ENST00000490175 POGZQ7Z3K3 1410 aa22.21■■□□□ 1.15
SNX5-214ENST00000490175 MYT1LQ9UL68 1186 aa22.21■■□□□ 1.15
SNX5-214ENST00000490175 MYT1Q01538 1121 aa22.2■■□□□ 1.14
SNX5-214ENST00000490175 KIF3BO15066 747 aa22.19■■□□□ 1.14
SNX5-214ENST00000490175 STAC3Q96MF2 364 aa22.19■■□□□ 1.14
SNX5-214ENST00000490175 MLH3Q9UHC1 1453 aa22.18■■□□□ 1.14
SNX5-214ENST00000490175 NEO1Q92859 1461 aa22.18■■□□□ 1.14
SNX5-214ENST00000490175 NEURL4Q96JN8 1562 aa22.18■■□□□ 1.14
SNX5-214ENST00000490175 ST20-MTHFSA0A0A6YYL1 179 aa22.18■■□□□ 1.14
SNX5-214ENST00000490175 RNF17Q9BXT8 1623 aaKnown RBP22.17■■□□□ 1.14
SNX5-214ENST00000490175 CLTCL1P53675 1640 aa22.16■■□□□ 1.14
SNX5-214ENST00000490175 HECW2Q9P2P5 1572 aa22.16■■□□□ 1.14
SNX5-214ENST00000490175 LMTK2Q8IWU2 1503 aa22.15■■□□□ 1.14
SNX5-214ENST00000490175 EFCAB6Q5THR3 1501 aa22.13■■□□□ 1.13
SNX5-214ENST00000490175 MADDQ8WXG6 1647 aa22.12■■□□□ 1.13
SNX5-214ENST00000490175 NBPF1Q3BBV0 1214 aa22.11■■□□□ 1.13
SNX5-214ENST00000490175 POLR3GLQ9BT43 218 aa22.09■■□□□ 1.13
SNX5-214ENST00000490175 MAP3K4Q9Y6R4 1608 aa22.08■■□□□ 1.13
SNX5-214ENST00000490175 FRMPD1Q5SYB0 1578 aa22.08■■□□□ 1.12
SNX5-214ENST00000490175 PPRC1Q5VV67 1664 aaKnown RBP22.07■■□□□ 1.12
SNX5-214ENST00000490175 GLI2P10070 1586 aa22.07■■□□□ 1.12
SNX5-214ENST00000490175 MRS2Q9HD23 443 aa22.06■■□□□ 1.12
SNX5-214ENST00000490175 SUPT16HQ9Y5B9 1047 aaKnown RBP22.06■■□□□ 1.12
SNX5-214ENST00000490175 ABCA6Q8N139 1617 aa22.05■■□□□ 1.12
SNX5-214ENST00000490175 COL17A1Q9UMD9 1497 aaPredicted RBP22.05■■□□□ 1.12
SNX5-214ENST00000490175 KTN1Q86UP2 1357 aaKnown RBP22.05■■□□□ 1.12
SNX5-214ENST00000490175 HNRNPUQ00839 825 aaKnown RBP eCLIP22.04■■□□□ 1.12
SNX5-214ENST00000490175 CCDC184Q52MB2 194 aa22.04■■□□□ 1.12
SNX5-214ENST00000490175 KIF1BO60333 1816 aa22.04■■□□□ 1.12
SNX5-214ENST00000490175 KIAA1210Q9ULL0 1709 aa22.04■■□□□ 1.12
SNX5-214ENST00000490175 IQGAP1P46940 1657 aa22.02■■□□□ 1.12
SNX5-214ENST00000490175 RIMBP3CA6NJZ7 1639 aa22.01■■□□□ 1.11
SNX5-214ENST00000490175 RIMBP3BA6NNM3 1639 aa22.01■■□□□ 1.11
SNX5-214ENST00000490175 RIMBP3Q9UFD9 1639 aa22.01■■□□□ 1.11
SNX5-214ENST00000490175 TESK2Q96S53 571 aa22.01■■□□□ 1.11
SNX5-214ENST00000490175 RICTORQ6R327 1708 aa22■■□□□ 1.11
SNX5-214ENST00000490175 MYOM2P54296 1465 aa22■■□□□ 1.11
SNX5-214ENST00000490175 DIP2CQ9Y2E4 1556 aa21.97■■□□□ 1.11
SNX5-214ENST00000490175 IFT172Q9UG01 1749 aa21.97■■□□□ 1.11
SNX5-214ENST00000490175 CYB5RLQ6IPT4 315 aa21.97■■□□□ 1.11
SNX5-214ENST00000490175 TMF1P82094 1093 aa21.96■■□□□ 1.11
SNX5-214ENST00000490175 SCAF11Q99590 1463 aaKnown RBP21.96■■□□□ 1.11
SNX5-214ENST00000490175 UGGT1Q9NYU2 1555 aa21.95■■□□□ 1.1
SNX5-214ENST00000490175 RALBP1Q15311 655 aa21.95■■□□□ 1.1
SNX5-214ENST00000490175 FAM9BQ8IZU0 186 aa21.95■■□□□ 1.1
SNX5-214ENST00000490175 ABCC3O15438 1527 aa21.95■■□□□ 1.1
SNX5-214ENST00000490175 DISP3Q9P2K9 1392 aa21.94■■□□□ 1.1
SNX5-214ENST00000490175 NPATQ14207 1427 aa21.94■■□□□ 1.1
SNX5-214ENST00000490175 RAPGEF3O95398 923 aa21.94■■□□□ 1.1
SNX5-214ENST00000490175 ADGRB3O60242 1522 aa21.93■■□□□ 1.1
SNX5-214ENST00000490175 WASHC2CQ9Y4E1 1318 aa21.92■■□□□ 1.1
SNX5-214ENST00000490175 MROH2AA6NES4 1674 aa21.92■■□□□ 1.1
SNX5-214ENST00000490175 CAMSAP1Q5T5Y3 1602 aa21.91■■□□□ 1.1
SNX5-214ENST00000490175 ZBED9Q6R2W3 1325 aa21.91■■□□□ 1.1
SNX5-214ENST00000490175 NEFLP07196 543 aa21.91■■□□□ 1.1
SNX5-214ENST00000490175 GGT6Q6P531 493 aa21.91■■□□□ 1.1
SNX5-214ENST00000490175 ZC3H13Q5T200 1668 aaKnown RBP21.91■■□□□ 1.1
SNX5-214ENST00000490175 EIF3AQ14152 1382 aaKnown RBP21.91■■□□□ 1.1
Retrieved 100 of 20,778 RNA–protein pairs in 76 ms