RNA–Protein interactions for RNA: ENST00000490132.1

COL9A2-209, Transcript of collagen type IX alpha 2 chain, humanhuman

TSL 3

Gene COL9A2, Length 492 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL9A2-209ENST00000490132 RNF17Q9BXT8 1623 aaKnown RBP28.67■■■□□ 2.18
COL9A2-209ENST00000490132 TCOF1Q13428 1488 aaKnown RBP28.66■■■□□ 2.18
COL9A2-209ENST00000490132 ABCC5O15440 1437 aa28.66■■■□□ 2.18
COL9A2-209ENST00000490132 SHANK2Q9UPX8 1470 aa28.65■■■□□ 2.18
COL9A2-209ENST00000490132 EIF2AK4Q9P2K8 1649 aaKnown RBP28.65■■■□□ 2.18
COL9A2-209ENST00000490132 DNMT1P26358 1616 aaKnown RBP28.64■■■□□ 2.18
COL9A2-209ENST00000490132 NCOA1Q15788 1441 aa28.63■■■□□ 2.17
COL9A2-209ENST00000490132 CEP170BQ9Y4F5 1589 aaPredicted RBP28.62■■■□□ 2.17
COL9A2-209ENST00000490132 CAMSAP1Q5T5Y3 1602 aa28.62■■■□□ 2.17
COL9A2-209ENST00000490132 DAPK1P53355 1430 aa28.6■■■□□ 2.17
COL9A2-209ENST00000490132 PZPP20742 1482 aa28.6■■■□□ 2.17
COL9A2-209ENST00000490132 DUOX2Q9NRD8 1548 aa28.6■■■□□ 2.17
COL9A2-209ENST00000490132 MROH1Q8NDA8 1641 aa28.6■■■□□ 2.17
COL9A2-209ENST00000490132 WASHC2CQ9Y4E1 1318 aa28.59■■■□□ 2.17
COL9A2-209ENST00000490132 FBXO41Q8TF61 875 aa28.57■■■□□ 2.16
COL9A2-209ENST00000490132 DMRT2Q9Y5R5 561 aa28.57■■■□□ 2.16
COL9A2-209ENST00000490132 PTPRTO14522 1441 aa28.57■■■□□ 2.16
COL9A2-209ENST00000490132 ABCC3O15438 1527 aa28.56■■■□□ 2.16
COL9A2-209ENST00000490132 ZC3H13Q5T200 1668 aaKnown RBP28.56■■■□□ 2.16
COL9A2-209ENST00000490132 KIF15Q9NS87 1388 aa28.56■■■□□ 2.16
COL9A2-209ENST00000490132 FBXO31Q5XUX0 539 aaPredicted RBP28.55■■■□□ 2.16
COL9A2-209ENST00000490132 CEP152O94986 1710 aa28.53■■■□□ 2.16
COL9A2-209ENST00000490132 A2ML1A8K2U0 1454 aa28.53■■■□□ 2.16
COL9A2-209ENST00000490132 TNRQ92752 1358 aa28.52■■■□□ 2.16
COL9A2-209ENST00000490132 PLA2R1Q13018 1463 aa28.51■■■□□ 2.15
COL9A2-209ENST00000490132 RRP7BPQ9NSQ0 103 aa28.5■■■□□ 2.15
COL9A2-209ENST00000490132 ERBINQ96RT1 1412 aa28.5■■■□□ 2.15
COL9A2-209ENST00000490132 CERKQ8TCT0 537 aa28.49■■■□□ 2.15
COL9A2-209ENST00000490132 PRDM15P57071 1507 aaPredicted RBP28.48■■■□□ 2.15
COL9A2-209ENST00000490132 NCKAP5LQ9HCH0 1330 aa28.47■■■□□ 2.15
COL9A2-209ENST00000490132 CHIC2Q9UKJ5 165 aa28.45■■■□□ 2.14
COL9A2-209ENST00000490132 DEPDC5O75140 1603 aa28.44■■■□□ 2.14
COL9A2-209ENST00000490132 CFAP65Q6ZU64 1925 aaKnown RBP28.43■■■□□ 2.14
COL9A2-209ENST00000490132 SPATA31D1Q6ZQQ2 1576 aa28.43■■■□□ 2.14
COL9A2-209ENST00000490132 ANKRD30AQ9BXX3 1397 aa28.43■■■□□ 2.14
COL9A2-209ENST00000490132 FAM50AQ14320 339 aaKnown RBP28.42■■■□□ 2.14
COL9A2-209ENST00000490132 ADGRL2O95490 1459 aa28.41■■■□□ 2.14
COL9A2-209ENST00000490132 ERVK-7P63135 1459 aa28.4■■■□□ 2.14
COL9A2-209ENST00000490132 NLRP1Q9C000 1473 aa28.4■■■□□ 2.14
COL9A2-209ENST00000490132 LTBP4Q8N2S1 1624 aa28.4■■■□□ 2.14
COL9A2-209ENST00000490132 PKD2Q13563 968 aa28.4■■■□□ 2.14
COL9A2-209ENST00000490132 POLR1AO95602 1720 aaPredicted RBP28.38■■■□□ 2.13
COL9A2-209ENST00000490132 UGGT1Q9NYU2 1555 aa28.35■■■□□ 2.13
COL9A2-209ENST00000490132 NEURL4Q96JN8 1562 aa28.34■■■□□ 2.13
COL9A2-209ENST00000490132 ARHGAP31Q2M1Z3 1444 aa28.33■■■□□ 2.13
COL9A2-209ENST00000490132 VWDEQ8N2E2 1590 aa28.33■■■□□ 2.12
COL9A2-209ENST00000490132 GRWD1Q9BQ67 446 aaKnown RBP eCLIP28.32■■■□□ 2.12
COL9A2-209ENST00000490132 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP28.3■■■□□ 2.12
COL9A2-209ENST00000490132 PPARGC1BQ86YN6 1023 aaKnown RBP28.29■■■□□ 2.12
COL9A2-209ENST00000490132 LMTK2Q8IWU2 1503 aa28.28■■■□□ 2.12
COL9A2-209ENST00000490132 ZNF335Q9H4Z2 1342 aaPredicted RBP28.28■■■□□ 2.12
COL9A2-209ENST00000490132 KANK1Q14678 1352 aa28.27■■■□□ 2.12
COL9A2-209ENST00000490132 THEMISQ8N1K5 641 aaPredicted RBP28.26■■■□□ 2.11
COL9A2-209ENST00000490132 UBR1Q8IWV7 1749 aa28.26■■■□□ 2.11
COL9A2-209ENST00000490132 ANKRD50Q9ULJ7 1429 aa28.25■■■□□ 2.11
COL9A2-209ENST00000490132 IQSEC2Q5JU85 1478 aa28.21■■■□□ 2.11
COL9A2-209ENST00000490132 ANKLE2Q86XL3 938 aa28.21■■■□□ 2.11
COL9A2-209ENST00000490132 EFCAB6Q5THR3 1501 aa28.21■■■□□ 2.11
COL9A2-209ENST00000490132 MED14O60244 1454 aa28.19■■■□□ 2.1
COL9A2-209ENST00000490132 PIK3C2BO00750 1634 aa28.18■■■□□ 2.1
COL9A2-209ENST00000490132 ROCK1Q13464 1354 aa28.17■■■□□ 2.1
COL9A2-209ENST00000490132 NPHP4O75161 1426 aaPredicted RBP28.17■■■□□ 2.1
COL9A2-209ENST00000490132 IQGAP1P46940 1657 aa28.16■■■□□ 2.1
COL9A2-209ENST00000490132 UNC13BO14795 1591 aa28.16■■■□□ 2.1
COL9A2-209ENST00000490132 SYNMO15061 1565 aa28.16■■■□□ 2.1
COL9A2-209ENST00000490132 NOS1P29475 1434 aa28.12■■■□□ 2.09
COL9A2-209ENST00000490132 ARHGAP23Q9P227 1491 aa28.12■■■□□ 2.09
COL9A2-209ENST00000490132 TET3O43151 1660 aa28.12■■■□□ 2.09
COL9A2-209ENST00000490132 SLIT1O75093 1534 aa28.11■■■□□ 2.09
COL9A2-209ENST00000490132 ITGAEP38570 1179 aa28.1■■■□□ 2.09
COL9A2-209ENST00000490132 KDM5AP29375 1690 aaKnown RBP28.09■■■□□ 2.09
COL9A2-209ENST00000490132 GCC2Q8IWJ2 1684 aa28.09■■■□□ 2.09
COL9A2-209ENST00000490132 SCAF11Q99590 1463 aaKnown RBP28.08■■■□□ 2.09
COL9A2-209ENST00000490132 RRBP1Q9P2E9 1410 aaKnown RBP28.07■■■□□ 2.08
COL9A2-209ENST00000490132 RPRD2Q5VT52 1461 aaKnown RBP28.07■■■□□ 2.08
COL9A2-209ENST00000490132 IDI1Q13907 227 aa28.06■■■□□ 2.08
COL9A2-209ENST00000490132 CPS1P31327 1500 aa28.06■■■□□ 2.08
COL9A2-209ENST00000490132 LTKP29376 864 aa28.04■■■□□ 2.08
COL9A2-209ENST00000490132 STRCP1A6NGW2 1772 aa28.04■■■□□ 2.08
COL9A2-209ENST00000490132 IQGAP3Q86VI3 1631 aa28.03■■■□□ 2.08
COL9A2-209ENST00000490132 ADGRB3O60242 1522 aa28.02■■■□□ 2.08
COL9A2-209ENST00000490132 E9PCH4 1651 aa28.02■■■□□ 2.08
COL9A2-209ENST00000490132 TMEM2Q9UHN6 1383 aa28.01■■■□□ 2.07
COL9A2-209ENST00000490132 TXNDC2Q86VQ3 553 aa28■■■□□ 2.07
COL9A2-209ENST00000490132 STAG3Q9UJ98 1225 aa27.99■■■□□ 2.07
COL9A2-209ENST00000490132 MYO5BQ9ULV0 1848 aa27.98■■■□□ 2.07
COL9A2-209ENST00000490132 UBAP1LF5GYI3 381 aa27.96■■■□□ 2.07
COL9A2-209ENST00000490132 SLC52A1Q9NWF4 448 aa27.96■■■□□ 2.07
COL9A2-209ENST00000490132 EID1Q9Y6B2 187 aa27.95■■■□□ 2.06
COL9A2-209ENST00000490132 NUP155O75694 1391 aa27.94■■■□□ 2.06
COL9A2-209ENST00000490132 TMEM131LA2VDJ0 1609 aa27.91■■■□□ 2.06
COL9A2-209ENST00000490132 LRRC7Q96NW7 1537 aa27.89■■■□□ 2.06
COL9A2-209ENST00000490132 NAIPQ13075 1403 aa27.86■■■□□ 2.05
COL9A2-209ENST00000490132 ALKQ9UM73 1620 aa27.85■■■□□ 2.05
COL9A2-209ENST00000490132 ZFYVE9O95405 1425 aa27.85■■■□□ 2.05
COL9A2-209ENST00000490132 XIRP1Q702N8 1843 aaKnown RBP27.82■■■□□ 2.04
COL9A2-209ENST00000490132 SPHKAPQ2M3C7 1700 aa27.81■■■□□ 2.04
COL9A2-209ENST00000490132 RIMS2Q9UQ26 1411 aa27.81■■■□□ 2.04
COL9A2-209ENST00000490132 TOM1O60784 492 aa27.79■■■□□ 2.04
COL9A2-209ENST00000490132 SLC26A8Q96RN1 970 aa27.78■■■□□ 2.04
Retrieved 100 of 20,778 RNA–protein pairs in 50.4 ms