RNA–Protein interactions for RNA: ENST00000490061.3

RN7SL239P-201, Transcript of RNA, 7SL, cytoplasmic 239, pseudogene, humanhuman

BASIC

Gene RN7SL239P, Length 300 nt, Biotype misc RNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RN7SL239P-201ENST00000490061 VWDEQ8N2E2 1590 aa13.89□□□□□ -0.19
RN7SL239P-201ENST00000490061 PZPP20742 1482 aa13.89□□□□□ -0.19
RN7SL239P-201ENST00000490061 ZNF777Q9ULD5 760 aaPredicted RBP13.89□□□□□ -0.19
RN7SL239P-201ENST00000490061 RNF17Q9BXT8 1623 aaKnown RBP13.89□□□□□ -0.19
RN7SL239P-201ENST00000490061 RTEL1-TNFRSF6BF6WH68 1400 aa13.89□□□□□ -0.19
RN7SL239P-201ENST00000490061 LRRIQ1Q96JM4 1722 aa13.88□□□□□ -0.19
RN7SL239P-201ENST00000490061 GPATCH8Q9UKJ3 1502 aaKnown RBP13.88□□□□□ -0.19
RN7SL239P-201ENST00000490061 NPHP4O75161 1426 aaPredicted RBP13.88□□□□□ -0.19
RN7SL239P-201ENST00000490061 CFDP1Q9UEE9 299 aaPredicted RBP13.87□□□□□ -0.19
RN7SL239P-201ENST00000490061 DHX29Q7Z478 1369 aaKnown RBP13.86□□□□□ -0.19
RN7SL239P-201ENST00000490061 HNRNPMP52272 730 aaKnown RBP eCLIP13.86□□□□□ -0.19
RN7SL239P-201ENST00000490061 UGGT1Q9NYU2 1555 aa13.86□□□□□ -0.19
RN7SL239P-201ENST00000490061 FYCO1Q9BQS8 1478 aa13.86□□□□□ -0.19
RN7SL239P-201ENST00000490061 KDM5DQ9BY66 1539 aa13.85□□□□□ -0.19
RN7SL239P-201ENST00000490061 MIA2Q96PC5 1412 aa13.85□□□□□ -0.19
RN7SL239P-201ENST00000490061 ALKQ9UM73 1620 aa13.85□□□□□ -0.19
RN7SL239P-201ENST00000490061 RSPH4AQ5TD94 716 aa13.84□□□□□ -0.19
RN7SL239P-201ENST00000490061 IQGAP1P46940 1657 aa13.84□□□□□ -0.19
RN7SL239P-201ENST00000490061 CCNB3Q8WWL7 1395 aa13.83□□□□□ -0.19
RN7SL239P-201ENST00000490061 LRRC7Q96NW7 1537 aa13.83□□□□□ -0.2
RN7SL239P-201ENST00000490061 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP13.83□□□□□ -0.2
RN7SL239P-201ENST00000490061 WASHC2CQ9Y4E1 1318 aa13.82□□□□□ -0.2
RN7SL239P-201ENST00000490061 RGS17Q9UGC6 210 aaPredicted RBP13.8□□□□□ -0.2
RN7SL239P-201ENST00000490061 FAM135BQ49AJ0 1406 aa13.8□□□□□ -0.2
RN7SL239P-201ENST00000490061 KIF3BO15066 747 aa13.77□□□□□ -0.21
RN7SL239P-201ENST00000490061 MBD5Q9P267 1494 aa13.76□□□□□ -0.21
RN7SL239P-201ENST00000490061 FBXO31Q5XUX0 539 aaPredicted RBP13.76□□□□□ -0.21
RN7SL239P-201ENST00000490061 MTUS2Q5JR59 1369 aa13.74□□□□□ -0.21
RN7SL239P-201ENST00000490061 ZC3H13Q5T200 1668 aaKnown RBP13.74□□□□□ -0.21
RN7SL239P-201ENST00000490061 CCDC141Q6ZP82 1450 aa13.73□□□□□ -0.21
RN7SL239P-201ENST00000490061 LRRC9Q6ZRR7 1453 aa13.73□□□□□ -0.21
RN7SL239P-201ENST00000490061 STRCP1A6NGW2 1772 aa13.72□□□□□ -0.21
RN7SL239P-201ENST00000490061 SCAF11Q99590 1463 aaKnown RBP13.72□□□□□ -0.21
RN7SL239P-201ENST00000490061 POTEAQ6S8J7 498 aa13.7□□□□□ -0.22
RN7SL239P-201ENST00000490061 EID1Q9Y6B2 187 aa13.7□□□□□ -0.22
RN7SL239P-201ENST00000490061 TSPY4P0CV99 314 aa13.69□□□□□ -0.22
RN7SL239P-201ENST00000490061 TSPY10P0CW01 314 aa13.69□□□□□ -0.22
RN7SL239P-201ENST00000490061 CEP162Q5TB80 1403 aa13.68□□□□□ -0.22
RN7SL239P-201ENST00000490061 SLIT1O75093 1534 aa13.68□□□□□ -0.22
RN7SL239P-201ENST00000490061 TIAM1Q13009 1591 aa13.67□□□□□ -0.22
RN7SL239P-201ENST00000490061 EHBP1L1Q8N3D4 1523 aa13.67□□□□□ -0.22
RN7SL239P-201ENST00000490061 ERVK-7P63135 1459 aa13.67□□□□□ -0.22
RN7SL239P-201ENST00000490061 ARHGAP23Q9P227 1491 aa13.67□□□□□ -0.22
RN7SL239P-201ENST00000490061 SENP3Q9H4L4 574 aaPredicted RBP13.66□□□□□ -0.22
RN7SL239P-201ENST00000490061 ZNF772Q68DY9 489 aaPredicted RBP13.65□□□□□ -0.22
RN7SL239P-201ENST00000490061 TXNDC2Q86VQ3 553 aa13.65□□□□□ -0.22
RN7SL239P-201ENST00000490061 JCADQ9P266 1359 aa13.65□□□□□ -0.22
RN7SL239P-201ENST00000490061 EIF2AK4Q9P2K8 1649 aaKnown RBP13.64□□□□□ -0.23
RN7SL239P-201ENST00000490061 UBR1Q8IWV7 1749 aa13.64□□□□□ -0.23
RN7SL239P-201ENST00000490061 ABCC3O15438 1527 aa13.64□□□□□ -0.23
RN7SL239P-201ENST00000490061 ZNF644Q9H582 1327 aaPredicted RBP13.64□□□□□ -0.23
RN7SL239P-201ENST00000490061 ARHGEF5Q12774 1597 aa13.63□□□□□ -0.23
RN7SL239P-201ENST00000490061 XIRP1Q702N8 1843 aaKnown RBP13.63□□□□□ -0.23
RN7SL239P-201ENST00000490061 KCNA6P17658 529 aa13.63□□□□□ -0.23
RN7SL239P-201ENST00000490061 EHMT2Q96KQ7 1210 aa13.63□□□□□ -0.23
RN7SL239P-201ENST00000490061 CAMSAP2Q08AD1 1489 aa13.62□□□□□ -0.23
RN7SL239P-201ENST00000490061 FOXD1Q16676 465 aa13.62□□□□□ -0.23
RN7SL239P-201ENST00000490061 ARHGAP31Q2M1Z3 1444 aa13.62□□□□□ -0.23
RN7SL239P-201ENST00000490061 FGD6Q6ZV73 1430 aa13.62□□□□□ -0.23
RN7SL239P-201ENST00000490061 ROBO1Q9Y6N7 1651 aa13.62□□□□□ -0.23
RN7SL239P-201ENST00000490061 SPATA31A6Q5VVP1 1343 aa13.62□□□□□ -0.23
RN7SL239P-201ENST00000490061 TMEM94Q12767 1356 aa13.61□□□□□ -0.23
RN7SL239P-201ENST00000490061 KDM5AP29375 1690 aaKnown RBP13.61□□□□□ -0.23
RN7SL239P-201ENST00000490061 NKTRP30414 1462 aaKnown RBP13.61□□□□□ -0.23
RN7SL239P-201ENST00000490061 MSH6P52701 1360 aa13.6□□□□□ -0.23
RN7SL239P-201ENST00000490061 UPF1Q92900 1129 aaKnown RBP eCLIP13.6□□□□□ -0.23
RN7SL239P-201ENST00000490061 LTKP29376 864 aa13.59□□□□□ -0.23
RN7SL239P-201ENST00000490061 NCOA2Q15596 1464 aa13.59□□□□□ -0.23
RN7SL239P-201ENST00000490061 CDK12Q9NYV4 1490 aaPredicted RBP13.59□□□□□ -0.23
RN7SL239P-201ENST00000490061 PRDM15P57071 1507 aaPredicted RBP13.59□□□□□ -0.23
RN7SL239P-201ENST00000490061 TMEM2Q9UHN6 1383 aa13.58□□□□□ -0.23
RN7SL239P-201ENST00000490061 MAST1Q9Y2H9 1570 aa13.58□□□□□ -0.24
RN7SL239P-201ENST00000490061 NCOA3Q9Y6Q9 1424 aa13.57□□□□□ -0.24
RN7SL239P-201ENST00000490061 PROSER2Q86WR7 435 aaPredicted RBP13.57□□□□□ -0.24
RN7SL239P-201ENST00000490061 SLAIN2Q9P270 581 aa13.56□□□□□ -0.24
RN7SL239P-201ENST00000490061 STAG3Q9UJ98 1225 aa13.56□□□□□ -0.24
RN7SL239P-201ENST00000490061 SETD1AO15047 1707 aaKnown RBP13.56□□□□□ -0.24
RN7SL239P-201ENST00000490061 PHLPP1O60346 1717 aa13.56□□□□□ -0.24
RN7SL239P-201ENST00000490061 MAP3K1Q13233 1512 aa13.55□□□□□ -0.24
RN7SL239P-201ENST00000490061 MEX3CQ5U5Q3 659 aaKnown RBP13.54□□□□□ -0.24
RN7SL239P-201ENST00000490061 NWD1Q149M9 1564 aa13.54□□□□□ -0.24
RN7SL239P-201ENST00000490061 RXRBP28702 533 aa13.53□□□□□ -0.24
RN7SL239P-201ENST00000490061 DUOX2Q9NRD8 1548 aa13.53□□□□□ -0.24
RN7SL239P-201ENST00000490061 CFAP65Q6ZU64 1925 aaKnown RBP13.52□□□□□ -0.24
RN7SL239P-201ENST00000490061 HDGFP51858 240 aaKnown RBP13.52□□□□□ -0.25
RN7SL239P-201ENST00000490061 EFCAB6Q5THR3 1501 aa13.52□□□□□ -0.25
RN7SL239P-201ENST00000490061 TET3O43151 1660 aa13.51□□□□□ -0.25
RN7SL239P-201ENST00000490061 MROH1Q8NDA8 1641 aa13.51□□□□□ -0.25
RN7SL239P-201ENST00000490061 ERBINQ96RT1 1412 aa13.5□□□□□ -0.25
RN7SL239P-201ENST00000490061 KANK1Q14678 1352 aa13.5□□□□□ -0.25
RN7SL239P-201ENST00000490061 CEP152O94986 1710 aa13.5□□□□□ -0.25
RN7SL239P-201ENST00000490061 PIK3C2BO00750 1634 aa13.49□□□□□ -0.25
RN7SL239P-201ENST00000490061 COL16A1Q07092 1604 aaPredicted RBP13.49□□□□□ -0.25
RN7SL239P-201ENST00000490061 SRCAPQ6ZRS2 3230 aa13.48□□□□□ -0.25
RN7SL239P-201ENST00000490061 SHPRHQ149N8 1683 aa13.48□□□□□ -0.25
RN7SL239P-201ENST00000490061 CHIC1Q5VXU3 224 aa13.48□□□□□ -0.25
RN7SL239P-201ENST00000490061 CADPS2Q86UW7 1296 aa13.48□□□□□ -0.25
RN7SL239P-201ENST00000490061 AHDC1Q5TGY3 1603 aaPredicted RBP13.47□□□□□ -0.25
RN7SL239P-201ENST00000490061 TRIM52Q96A61 297 aa13.47□□□□□ -0.25
RN7SL239P-201ENST00000490061 SLC52A1Q9NWF4 448 aa13.47□□□□□ -0.25
Retrieved 100 of 20,778 RNA–protein pairs in 57 ms