RNA–Protein interactions for RNA: ENST00000490006.6

LINC01140-207, Transcript of long intergenic non-protein coding RNA 1140, humanhuman

TSL 2

Gene LINC01140, Length 1,389 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC01140-207ENST00000490006 A2MP01023 1474 aa15.79■□□□□ 0.12
LINC01140-207ENST00000490006 CROCC2H7BZ55 1655 aa15.78■□□□□ 0.12
LINC01140-207ENST00000490006 SHANK2Q9UPX8 1470 aa15.78■□□□□ 0.12
LINC01140-207ENST00000490006 ABCA6Q8N139 1617 aa15.78■□□□□ 0.12
LINC01140-207ENST00000490006 ESF1Q9H501 851 aaKnown RBP15.77■□□□□ 0.12
LINC01140-207ENST00000490006 INO80Q9ULG1 1556 aaPredicted RBP15.77■□□□□ 0.12
LINC01140-207ENST00000490006 DIP2CQ9Y2E4 1556 aa15.77■□□□□ 0.12
LINC01140-207ENST00000490006 ROCK1Q13464 1354 aa15.77■□□□□ 0.11
LINC01140-207ENST00000490006 MAST1Q9Y2H9 1570 aa15.76■□□□□ 0.11
LINC01140-207ENST00000490006 ADGBQ8N7X0 1667 aa15.74■□□□□ 0.11
LINC01140-207ENST00000490006 ANKRD50Q9ULJ7 1429 aa15.74■□□□□ 0.11
LINC01140-207ENST00000490006 ARHGEF40Q8TER5 1519 aa15.74■□□□□ 0.11
LINC01140-207ENST00000490006 ADGRL2O95490 1459 aa15.73■□□□□ 0.11
LINC01140-207ENST00000490006 DUOX2Q9NRD8 1548 aa15.72■□□□□ 0.11
LINC01140-207ENST00000490006 NAIPQ13075 1403 aa15.72■□□□□ 0.11
LINC01140-207ENST00000490006 SETD5Q9C0A6 1442 aa15.71■□□□□ 0.11
LINC01140-207ENST00000490006 WASHC2CQ9Y4E1 1318 aa15.71■□□□□ 0.11
LINC01140-207ENST00000490006 PLXNC1O60486 1568 aa15.7■□□□□ 0.1
LINC01140-207ENST00000490006 HFM1A2PYH4 1435 aa15.68■□□□□ 0.1
LINC01140-207ENST00000490006 NUP155O75694 1391 aa15.67■□□□□ 0.1
LINC01140-207ENST00000490006 RAB3GAP2Q9H2M9 1393 aa15.67■□□□□ 0.1
LINC01140-207ENST00000490006 SIGLEC1Q9BZZ2 1709 aa15.67■□□□□ 0.1
LINC01140-207ENST00000490006 KANK1Q14678 1352 aa15.67■□□□□ 0.1
LINC01140-207ENST00000490006 ERBINQ96RT1 1412 aa15.66■□□□□ 0.1
LINC01140-207ENST00000490006 CEBPAP49715 358 aaPredicted RBP15.66■□□□□ 0.1
LINC01140-207ENST00000490006 KDM4FA0A1W2PPD8 638 aa15.64■□□□□ 0.09
LINC01140-207ENST00000490006 KCNA4P22459 653 aa15.63■□□□□ 0.09
LINC01140-207ENST00000490006 SLC4A1APQ9BWU0 796 aaKnown RBP15.63■□□□□ 0.09
LINC01140-207ENST00000490006 AGLP35573 1532 aa15.62■□□□□ 0.09
LINC01140-207ENST00000490006 REREQ9P2R6 1566 aa15.61■□□□□ 0.09
LINC01140-207ENST00000490006 CFAP65Q6ZU64 1925 aaKnown RBP15.61■□□□□ 0.09
LINC01140-207ENST00000490006 MPHOSPH9Q99550 1183 aa15.61■□□□□ 0.09
LINC01140-207ENST00000490006 GCC2Q8IWJ2 1684 aa15.59■□□□□ 0.09
LINC01140-207ENST00000490006 PKD2Q13563 968 aa15.59■□□□□ 0.09
LINC01140-207ENST00000490006 FBXO31Q5XUX0 539 aaPredicted RBP15.59■□□□□ 0.09
LINC01140-207ENST00000490006 BCORL1Q5H9F3 1711 aa15.58■□□□□ 0.08
LINC01140-207ENST00000490006 ZMYM3Q14202 1370 aa15.57■□□□□ 0.08
LINC01140-207ENST00000490006 EIF2AK4Q9P2K8 1649 aaKnown RBP15.57■□□□□ 0.08
LINC01140-207ENST00000490006 HRCP23327 699 aa15.57■□□□□ 0.08
LINC01140-207ENST00000490006 CLTCQ00610 1675 aaKnown RBP15.55■□□□□ 0.08
LINC01140-207ENST00000490006 RIMS1Q86UR5 1692 aaKnown RBP15.54■□□□□ 0.08
LINC01140-207ENST00000490006 MADDQ8WXG6 1647 aa15.53■□□□□ 0.08
LINC01140-207ENST00000490006 FER1L4A9Z1Z3 1794 aa15.53■□□□□ 0.08
LINC01140-207ENST00000490006 RNF17Q9BXT8 1623 aaKnown RBP15.53■□□□□ 0.08
LINC01140-207ENST00000490006 ACIN1Q9UKV3 1341 aaKnown RBP15.53■□□□□ 0.08
LINC01140-207ENST00000490006 CEP152O94986 1710 aa15.52■□□□□ 0.08
LINC01140-207ENST00000490006 ABCC3O15438 1527 aa15.51■□□□□ 0.07
LINC01140-207ENST00000490006 MROH1Q8NDA8 1641 aa15.51■□□□□ 0.07
LINC01140-207ENST00000490006 ADAMTSL3P82987 1691 aa15.51■□□□□ 0.07
LINC01140-207ENST00000490006 CNTLNQ9NXG0 1405 aa15.51■□□□□ 0.07
LINC01140-207ENST00000490006 CHGAP10645 457 aaKnown RBP15.5■□□□□ 0.07
LINC01140-207ENST00000490006 KDM5DQ9BY66 1539 aa15.5■□□□□ 0.07
LINC01140-207ENST00000490006 FAM135AQ9P2D6 1515 aa15.5■□□□□ 0.07
LINC01140-207ENST00000490006 UNC13BO14795 1591 aa15.49■□□□□ 0.07
LINC01140-207ENST00000490006 DEPDC5O75140 1603 aa15.49■□□□□ 0.07
LINC01140-207ENST00000490006 PZPP20742 1482 aa15.49■□□□□ 0.07
LINC01140-207ENST00000490006 PTPRMP28827 1452 aa15.49■□□□□ 0.07
LINC01140-207ENST00000490006 CCER1Q8TC90 406 aaPredicted RBP15.49■□□□□ 0.07
LINC01140-207ENST00000490006 PRDM15P57071 1507 aaPredicted RBP15.48■□□□□ 0.07
LINC01140-207ENST00000490006 STAG3Q9UJ98 1225 aa15.47■□□□□ 0.07
LINC01140-207ENST00000490006 NEUROD1Q13562 356 aa15.46■□□□□ 0.07
LINC01140-207ENST00000490006 IQGAP3Q86VI3 1631 aa15.45■□□□□ 0.06
LINC01140-207ENST00000490006 NPATQ14207 1427 aa15.45■□□□□ 0.06
LINC01140-207ENST00000490006 VWDEQ8N2E2 1590 aa15.45■□□□□ 0.06
LINC01140-207ENST00000490006 CAMSAP1Q5T5Y3 1602 aa15.44■□□□□ 0.06
LINC01140-207ENST00000490006 IDI1Q13907 227 aa15.43■□□□□ 0.06
LINC01140-207ENST00000490006 TNRQ92752 1358 aa15.43■□□□□ 0.06
LINC01140-207ENST00000490006 TET3O43151 1660 aa15.42■□□□□ 0.06
LINC01140-207ENST00000490006 C3P01024 1663 aa15.42■□□□□ 0.06
LINC01140-207ENST00000490006 SIN3AQ96ST3 1273 aa15.42■□□□□ 0.06
LINC01140-207ENST00000490006 LMTK2Q8IWU2 1503 aa15.42■□□□□ 0.06
LINC01140-207ENST00000490006 DHX57Q6P158 1386 aaKnown RBP15.42■□□□□ 0.06
LINC01140-207ENST00000490006 RGL3Q3MIN7 710 aa15.41■□□□□ 0.06
LINC01140-207ENST00000490006 E9PCH4 1651 aa15.41■□□□□ 0.06
LINC01140-207ENST00000490006 ZC3H13Q5T200 1668 aaKnown RBP15.41■□□□□ 0.06
LINC01140-207ENST00000490006 EFCAB6Q5THR3 1501 aa15.4■□□□□ 0.06
LINC01140-207ENST00000490006 ARHGAP31Q2M1Z3 1444 aa15.4■□□□□ 0.06
LINC01140-207ENST00000490006 ZNF326Q5BKZ1 582 aaKnown RBP15.39■□□□□ 0.05
LINC01140-207ENST00000490006 MROH2AA6NES4 1674 aa15.39■□□□□ 0.05
LINC01140-207ENST00000490006 SLC52A1Q9NWF4 448 aa15.38■□□□□ 0.05
LINC01140-207ENST00000490006 ERVK-7P63135 1459 aa15.38■□□□□ 0.05
LINC01140-207ENST00000490006 SETD1BQ9UPS6 1966 aaKnown RBP15.38■□□□□ 0.05
LINC01140-207ENST00000490006 HSPA2P54652 639 aa15.36■□□□□ 0.05
LINC01140-207ENST00000490006 NUTM2DQ5VT03 806 aaPredicted RBP15.36■□□□□ 0.05
LINC01140-207ENST00000490006 ANKRD30BQ9BXX2 1392 aa15.36■□□□□ 0.05
LINC01140-207ENST00000490006 PREX1Q8TCU6 1659 aa15.35■□□□□ 0.05
LINC01140-207ENST00000490006 PLA2R1Q13018 1463 aa15.35■□□□□ 0.05
LINC01140-207ENST00000490006 RPRD2Q5VT52 1461 aaKnown RBP15.35■□□□□ 0.05
LINC01140-207ENST00000490006 UGGT1Q9NYU2 1555 aa15.34■□□□□ 0.05
LINC01140-207ENST00000490006 NOS1P29475 1434 aa15.34■□□□□ 0.05
LINC01140-207ENST00000490006 THEMISQ8N1K5 641 aaPredicted RBP15.34■□□□□ 0.05
LINC01140-207ENST00000490006 U3KPZ7 1027 aaPredicted RBP15.34■□□□□ 0.05
LINC01140-207ENST00000490006 CCDC144AA2RUR9 1427 aa15.33■□□□□ 0.04
LINC01140-207ENST00000490006 BCANQ96GW7 911 aa15.33■□□□□ 0.04
LINC01140-207ENST00000490006 KDM2AQ9Y2K7 1162 aa15.33■□□□□ 0.04
LINC01140-207ENST00000490006 PTPRTO14522 1441 aa15.32■□□□□ 0.04
LINC01140-207ENST00000490006 UHRF1BP1Q6BDS2 1440 aa15.32■□□□□ 0.04
LINC01140-207ENST00000490006 SPHKAPQ2M3C7 1700 aa15.31■□□□□ 0.04
LINC01140-207ENST00000490006 SYNMO15061 1565 aa15.31■□□□□ 0.04
LINC01140-207ENST00000490006 SPATA31D1Q6ZQQ2 1576 aa15.31■□□□□ 0.04
Retrieved 100 of 20,778 RNA–protein pairs in 10.4 ms