RNA–Protein interactions for RNA: ENST00000489935.1

KCNC4-207, Transcript of potassium voltage-gated channel subfamily C member 4, humanhuman

TSL 1 (best)

Gene KCNC4, Length 1,955 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
KCNC4-207ENST00000489935 KDM2AQ9Y2K7 1162 aa36.94■■■■□ 3.5
KCNC4-207ENST00000489935 RALGAPBQ86X10 1494 aa36.94■■■■□ 3.5
KCNC4-207ENST00000489935 DCAF11Q8TEB1 546 aa36.93■■■■□ 3.5
KCNC4-207ENST00000489935 CCDC144AA2RUR9 1427 aa36.93■■■■□ 3.5
KCNC4-207ENST00000489935 USP47Q96K76 1375 aa36.93■■■■□ 3.5
KCNC4-207ENST00000489935 KIF7Q2M1P5 1343 aa36.92■■■■□ 3.5
KCNC4-207ENST00000489935 KDM5CP41229 1560 aa36.92■■■■□ 3.5
KCNC4-207ENST00000489935 BCORL1Q5H9F3 1711 aa36.87■■■■□ 3.49
KCNC4-207ENST00000489935 NPM1P06748 294 aaKnown RBP eCLIP36.86■■■■□ 3.49
KCNC4-207ENST00000489935 ADGRL1O94910 1474 aa36.85■■■■□ 3.49
KCNC4-207ENST00000489935 SCAPERQ9BY12 1400 aa36.84■■■■□ 3.49
KCNC4-207ENST00000489935 INO80Q9ULG1 1556 aaPredicted RBP36.84■■■■□ 3.49
KCNC4-207ENST00000489935 ATP7AQ04656 1500 aa36.83■■■■□ 3.49
KCNC4-207ENST00000489935 ATP10AO60312 1499 aa36.82■■■■□ 3.48
KCNC4-207ENST00000489935 CARD11Q9BXL7 1154 aa36.8■■■■□ 3.48
KCNC4-207ENST00000489935 RGL3Q3MIN7 710 aa36.78■■■■□ 3.48
KCNC4-207ENST00000489935 DEPDC5O75140 1603 aa36.75■■■■□ 3.47
KCNC4-207ENST00000489935 PRAG1Q86YV5 1406 aa36.74■■■■□ 3.47
KCNC4-207ENST00000489935 A2MP01023 1474 aa36.74■■■■□ 3.47
KCNC4-207ENST00000489935 E9PCH4 1651 aa36.73■■■■□ 3.47
KCNC4-207ENST00000489935 TRPM1Q7Z4N2 1603 aa36.71■■■■□ 3.47
KCNC4-207ENST00000489935 PRKRIP1Q9H875 184 aaPredicted RBP36.69■■■■□ 3.46
KCNC4-207ENST00000489935 MYT1LQ9UL68 1186 aa36.68■■■■□ 3.46
KCNC4-207ENST00000489935 ROCK2O75116 1388 aaKnown RBP36.68■■■■□ 3.46
KCNC4-207ENST00000489935 ARID4BQ4LE39 1312 aaPredicted RBP36.66■■■■□ 3.46
KCNC4-207ENST00000489935 DHX29Q7Z478 1369 aaKnown RBP36.65■■■■□ 3.46
KCNC4-207ENST00000489935 CD109Q6YHK3 1445 aa36.64■■■■□ 3.46
KCNC4-207ENST00000489935 KIDINS220Q9ULH0 1771 aa36.64■■■■□ 3.46
KCNC4-207ENST00000489935 ST20-MTHFSA0A0A6YYL1 179 aa36.64■■■■□ 3.46
KCNC4-207ENST00000489935 VWDEQ8N2E2 1590 aa36.62■■■■□ 3.45
KCNC4-207ENST00000489935 KIF3BO15066 747 aa36.62■■■■□ 3.45
KCNC4-207ENST00000489935 EIF2AK4Q9P2K8 1649 aaKnown RBP36.61■■■■□ 3.45
KCNC4-207ENST00000489935 CCDC184Q52MB2 194 aa36.6■■■■□ 3.45
KCNC4-207ENST00000489935 TET3O43151 1660 aa36.6■■■■□ 3.45
KCNC4-207ENST00000489935 NBPF1Q3BBV0 1214 aa36.6■■■■□ 3.45
KCNC4-207ENST00000489935 POLR3GLQ9BT43 218 aa36.6■■■■□ 3.45
KCNC4-207ENST00000489935 ZNF518AQ6AHZ1 1483 aa36.58■■■■□ 3.45
KCNC4-207ENST00000489935 SPHKAPQ2M3C7 1700 aa36.57■■■■□ 3.45
KCNC4-207ENST00000489935 PTPRTO14522 1441 aa36.57■■■■□ 3.44
KCNC4-207ENST00000489935 TRPM2O94759 1503 aa36.57■■■■□ 3.44
KCNC4-207ENST00000489935 KANK1Q14678 1352 aa36.56■■■■□ 3.44
KCNC4-207ENST00000489935 CFAP74Q9C0B2 1584 aa36.56■■■■□ 3.44
KCNC4-207ENST00000489935 MROH1Q8NDA8 1641 aa36.56■■■■□ 3.44
KCNC4-207ENST00000489935 GPRASP1Q5JY77 1395 aa36.55■■■■□ 3.44
KCNC4-207ENST00000489935 PRDM15P57071 1507 aaPredicted RBP36.53■■■■□ 3.44
KCNC4-207ENST00000489935 LAMC1P11047 1609 aa36.5■■■■□ 3.43
KCNC4-207ENST00000489935 CEP152O94986 1710 aa36.5■■■■□ 3.43
KCNC4-207ENST00000489935 CLTCL1P53675 1640 aa36.49■■■■□ 3.43
KCNC4-207ENST00000489935 POGZQ7Z3K3 1410 aa36.49■■■■□ 3.43
KCNC4-207ENST00000489935 SUPT16HQ9Y5B9 1047 aaKnown RBP36.48■■■■□ 3.43
KCNC4-207ENST00000489935 HNRNPUQ00839 825 aaKnown RBP eCLIP36.42■■■■□ 3.42
KCNC4-207ENST00000489935 MLH3Q9UHC1 1453 aa36.42■■■■□ 3.42
KCNC4-207ENST00000489935 MRS2Q9HD23 443 aa36.42■■■■□ 3.42
KCNC4-207ENST00000489935 MADDQ8WXG6 1647 aa36.38■■■■□ 3.41
KCNC4-207ENST00000489935 HECW2Q9P2P5 1572 aa36.37■■■■□ 3.41
KCNC4-207ENST00000489935 RNF17Q9BXT8 1623 aaKnown RBP36.37■■■■□ 3.41
KCNC4-207ENST00000489935 FRMPD1Q5SYB0 1578 aa36.35■■■■□ 3.41
KCNC4-207ENST00000489935 NEO1Q92859 1461 aa36.35■■■■□ 3.41
KCNC4-207ENST00000489935 EFCAB6Q5THR3 1501 aa36.35■■■■□ 3.41
KCNC4-207ENST00000489935 CYB5RLQ6IPT4 315 aa36.34■■■■□ 3.41
KCNC4-207ENST00000489935 PPRC1Q5VV67 1664 aaKnown RBP36.33■■■■□ 3.41
KCNC4-207ENST00000489935 CNGB1Q14028 1251 aaPredicted RBP36.33■■■■□ 3.41
KCNC4-207ENST00000489935 FAM9BQ8IZU0 186 aa36.33■■■■□ 3.41
KCNC4-207ENST00000489935 TESK2Q96S53 571 aa36.32■■■■□ 3.4
KCNC4-207ENST00000489935 LMTK2Q8IWU2 1503 aa36.32■■■■□ 3.4
KCNC4-207ENST00000489935 ABCA6Q8N139 1617 aa36.3■■■■□ 3.4
KCNC4-207ENST00000489935 RAPGEF3O95398 923 aa36.29■■■■□ 3.4
KCNC4-207ENST00000489935 UGGT1Q9NYU2 1555 aa36.29■■■■□ 3.4
KCNC4-207ENST00000489935 STAC3Q96MF2 364 aa36.28■■■■□ 3.4
KCNC4-207ENST00000489935 MAP3K4Q9Y6R4 1608 aa36.27■■■■□ 3.4
KCNC4-207ENST00000489935 NEURL4Q96JN8 1562 aa36.26■■■■□ 3.4
KCNC4-207ENST00000489935 COL17A1Q9UMD9 1497 aaPredicted RBP36.26■■■■□ 3.39
KCNC4-207ENST00000489935 DISP3Q9P2K9 1392 aa36.24■■■■□ 3.39
KCNC4-207ENST00000489935 RIMBP3CA6NJZ7 1639 aa36.24■■■■□ 3.39
KCNC4-207ENST00000489935 RIMBP3BA6NNM3 1639 aa36.24■■■■□ 3.39
KCNC4-207ENST00000489935 RIMBP3Q9UFD9 1639 aa36.24■■■■□ 3.39
KCNC4-207ENST00000489935 KIF1BO60333 1816 aa36.22■■■■□ 3.39
KCNC4-207ENST00000489935 GGT6Q6P531 493 aa36.21■■■■□ 3.39
KCNC4-207ENST00000489935 IQGAP1P46940 1657 aa36.2■■■■□ 3.39
KCNC4-207ENST00000489935 RICTORQ6R327 1708 aa36.18■■■■□ 3.38
KCNC4-207ENST00000489935 FKBP8Q14318 412 aa36.16■■■■□ 3.38
KCNC4-207ENST00000489935 CFAP65Q6ZU64 1925 aaKnown RBP36.16■■■■□ 3.38
KCNC4-207ENST00000489935 GLI2P10070 1586 aa36.16■■■■□ 3.38
KCNC4-207ENST00000489935 TMF1P82094 1093 aa36.14■■■■□ 3.38
KCNC4-207ENST00000489935 DIP2CQ9Y2E4 1556 aa36.14■■■■□ 3.38
KCNC4-207ENST00000489935 MROH2AA6NES4 1674 aa36.14■■■■□ 3.38
KCNC4-207ENST00000489935 NPATQ14207 1427 aa36.14■■■■□ 3.38
KCNC4-207ENST00000489935 KIAA1210Q9ULL0 1709 aa36.12■■■■□ 3.37
KCNC4-207ENST00000489935 IFT172Q9UG01 1749 aa36.11■■■■□ 3.37
KCNC4-207ENST00000489935 PER1O15534 1290 aaPredicted RBP36.11■■■■□ 3.37
KCNC4-207ENST00000489935 KTN1Q86UP2 1357 aaKnown RBP36.1■■■■□ 3.37
KCNC4-207ENST00000489935 MYOM2P54296 1465 aa36.09■■■■□ 3.37
KCNC4-207ENST00000489935 SCAF11Q99590 1463 aaKnown RBP36.09■■■■□ 3.37
KCNC4-207ENST00000489935 ABCC3O15438 1527 aa36.09■■■■□ 3.37
KCNC4-207ENST00000489935 RALBP1Q15311 655 aa36.08■■■■□ 3.37
KCNC4-207ENST00000489935 WASHC2CQ9Y4E1 1318 aa36.08■■■■□ 3.37
KCNC4-207ENST00000489935 ADGRF5Q8IZF2 1346 aa36.07■■■■□ 3.37
KCNC4-207ENST00000489935 ZBED9Q6R2W3 1325 aa36.07■■■■□ 3.36
KCNC4-207ENST00000489935 MYBBP1AQ9BQG0 1328 aaKnown RBP36.04■■■■□ 3.36
KCNC4-207ENST00000489935 PNISRQ8TF01 805 aaKnown RBP36.04■■■■□ 3.36
Retrieved 100 of 20,778 RNA–protein pairs in 22.2 ms