RNA–Protein interactions for RNA: ENST00000489906.5

VDAC1-206, Transcript of voltage dependent anion channel 1, humanhuman

TSL 2

Gene VDAC1, Length 694 nt, Biotype retained intron, Subcellular localisation Cytosol, Exosome, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VDAC1-206ENST00000489906 CAMSAP2Q08AD1 1489 aa20.23■□□□□ 0.83
VDAC1-206ENST00000489906 RTEL1-TNFRSF6BF6WH68 1400 aa20.22■□□□□ 0.83
VDAC1-206ENST00000489906 NCOA2Q15596 1464 aa20.22■□□□□ 0.83
VDAC1-206ENST00000489906 TNRQ92752 1358 aa20.21■□□□□ 0.83
VDAC1-206ENST00000489906 CCDC141Q6ZP82 1450 aa20.21■□□□□ 0.83
VDAC1-206ENST00000489906 SCAF1Q9H7N4 1312 aaKnown RBP20.21■□□□□ 0.83
VDAC1-206ENST00000489906 WASHC2CQ9Y4E1 1318 aa20.19■□□□□ 0.82
VDAC1-206ENST00000489906 PIP4K2BP78356 416 aa20.17■□□□□ 0.82
VDAC1-206ENST00000489906 KDM5DQ9BY66 1539 aa20.17■□□□□ 0.82
VDAC1-206ENST00000489906 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP20.16■□□□□ 0.82
VDAC1-206ENST00000489906 PZPP20742 1482 aa20.15■□□□□ 0.82
VDAC1-206ENST00000489906 NEURL4Q96JN8 1562 aa20.15■□□□□ 0.82
VDAC1-206ENST00000489906 POLR1AO95602 1720 aaPredicted RBP20.14■□□□□ 0.81
VDAC1-206ENST00000489906 TSPY4P0CV99 314 aa20.11■□□□□ 0.81
VDAC1-206ENST00000489906 TSPY10P0CW01 314 aa20.11■□□□□ 0.81
VDAC1-206ENST00000489906 HSPA1LP34931 641 aa20.11■□□□□ 0.81
VDAC1-206ENST00000489906 ANKLE2Q86XL3 938 aa20.1■□□□□ 0.81
VDAC1-206ENST00000489906 SHANK2Q9UPX8 1470 aa20.1■□□□□ 0.81
VDAC1-206ENST00000489906 MIA2Q96PC5 1412 aa20.1■□□□□ 0.81
VDAC1-206ENST00000489906 RSPH4AQ5TD94 716 aa20.09■□□□□ 0.81
VDAC1-206ENST00000489906 SENP3Q9H4L4 574 aaPredicted RBP20.09■□□□□ 0.81
VDAC1-206ENST00000489906 LOC105371045A0A1W2PR82 267 aa20.08■□□□□ 0.81
VDAC1-206ENST00000489906 ARHGEF5Q12774 1597 aa20.08■□□□□ 0.8
VDAC1-206ENST00000489906 UGGT1Q9NYU2 1555 aa20.08■□□□□ 0.8
VDAC1-206ENST00000489906 THEMISQ8N1K5 641 aaPredicted RBP20.07■□□□□ 0.8
VDAC1-206ENST00000489906 CPS1P31327 1500 aa20.06■□□□□ 0.8
VDAC1-206ENST00000489906 VWDEQ8N2E2 1590 aa20.05■□□□□ 0.8
VDAC1-206ENST00000489906 NPHP4O75161 1426 aaPredicted RBP20.05■□□□□ 0.8
VDAC1-206ENST00000489906 TOM1O60784 492 aa20.05■□□□□ 0.8
VDAC1-206ENST00000489906 KANK4Q5T7N3 995 aaPredicted RBP20.05■□□□□ 0.8
VDAC1-206ENST00000489906 FAM135AQ9P2D6 1515 aa20.05■□□□□ 0.8
VDAC1-206ENST00000489906 LRRC9Q6ZRR7 1453 aa20.05■□□□□ 0.8
VDAC1-206ENST00000489906 NLRP1Q9C000 1473 aa20.05■□□□□ 0.8
VDAC1-206ENST00000489906 ABCC3O15438 1527 aa20.03■□□□□ 0.8
VDAC1-206ENST00000489906 VPS8Q8N3P4 1428 aa20.02■□□□□ 0.8
VDAC1-206ENST00000489906 CFAP65Q6ZU64 1925 aaKnown RBP20.02■□□□□ 0.79
VDAC1-206ENST00000489906 RNF17Q9BXT8 1623 aaKnown RBP20.01■□□□□ 0.79
VDAC1-206ENST00000489906 MED1Q15648 1581 aaPredicted RBP20■□□□□ 0.79
VDAC1-206ENST00000489906 IQGAP1P46940 1657 aa19.99■□□□□ 0.79
VDAC1-206ENST00000489906 ERVK-7P63135 1459 aa19.99■□□□□ 0.79
VDAC1-206ENST00000489906 MAST1Q9Y2H9 1570 aa19.98■□□□□ 0.79
VDAC1-206ENST00000489906 CEP152O94986 1710 aa19.98■□□□□ 0.79
VDAC1-206ENST00000489906 MED14O60244 1454 aa19.98■□□□□ 0.79
VDAC1-206ENST00000489906 DEPDC5O75140 1603 aa19.98■□□□□ 0.79
VDAC1-206ENST00000489906 MROH1Q8NDA8 1641 aa19.97■□□□□ 0.79
VDAC1-206ENST00000489906 STRCP1A6NGW2 1772 aa19.96■□□□□ 0.79
VDAC1-206ENST00000489906 ALKQ9UM73 1620 aa19.96■□□□□ 0.79
VDAC1-206ENST00000489906 ZC3H13Q5T200 1668 aaKnown RBP19.96■□□□□ 0.79
VDAC1-206ENST00000489906 MYOM3Q5VTT5 1437 aa19.95■□□□□ 0.78
VDAC1-206ENST00000489906 EIF2AK4Q9P2K8 1649 aaKnown RBP19.94■□□□□ 0.78
VDAC1-206ENST00000489906 GRWD1Q9BQ67 446 aaKnown RBP eCLIP19.93■□□□□ 0.78
VDAC1-206ENST00000489906 LRRC7Q96NW7 1537 aa19.92■□□□□ 0.78
VDAC1-206ENST00000489906 RRP7BPQ9NSQ0 103 aa19.92■□□□□ 0.78
VDAC1-206ENST00000489906 PHF23Q9BUL5 403 aaPredicted RBP19.91■□□□□ 0.78
VDAC1-206ENST00000489906 UBR1Q8IWV7 1749 aa19.9■□□□□ 0.78
VDAC1-206ENST00000489906 LTKP29376 864 aa19.9■□□□□ 0.78
VDAC1-206ENST00000489906 KIF15Q9NS87 1388 aa19.9■□□□□ 0.78
VDAC1-206ENST00000489906 DUOX2Q9NRD8 1548 aa19.9■□□□□ 0.78
VDAC1-206ENST00000489906 SCAF11Q99590 1463 aaKnown RBP19.88■□□□□ 0.77
VDAC1-206ENST00000489906 TXNDC2Q86VQ3 553 aa19.88■□□□□ 0.77
VDAC1-206ENST00000489906 ABCC5O15440 1437 aa19.86■□□□□ 0.77
VDAC1-206ENST00000489906 MAP3K1Q13233 1512 aa19.86■□□□□ 0.77
VDAC1-206ENST00000489906 CHIC2Q9UKJ5 165 aa19.85■□□□□ 0.77
VDAC1-206ENST00000489906 SYNMO15061 1565 aa19.84■□□□□ 0.77
VDAC1-206ENST00000489906 PRDM15P57071 1507 aaPredicted RBP19.83■□□□□ 0.77
VDAC1-206ENST00000489906 STAG3Q9UJ98 1225 aa19.83■□□□□ 0.77
VDAC1-206ENST00000489906 CROCC2H7BZ55 1655 aa19.83■□□□□ 0.76
VDAC1-206ENST00000489906 PTPN23Q9H3S7 1636 aa19.83■□□□□ 0.76
VDAC1-206ENST00000489906 PIK3C2BO00750 1634 aa19.82■□□□□ 0.76
VDAC1-206ENST00000489906 ARHGAP23Q9P227 1491 aa19.81■□□□□ 0.76
VDAC1-206ENST00000489906 EID1Q9Y6B2 187 aa19.81■□□□□ 0.76
VDAC1-206ENST00000489906 ERBINQ96RT1 1412 aa19.81■□□□□ 0.76
VDAC1-206ENST00000489906 DAPK1P53355 1430 aa19.8■□□□□ 0.76
VDAC1-206ENST00000489906 ARHGAP31Q2M1Z3 1444 aa19.8■□□□□ 0.76
VDAC1-206ENST00000489906 APLP2Q06481 763 aa19.8■□□□□ 0.76
VDAC1-206ENST00000489906 SLIT1O75093 1534 aa19.8■□□□□ 0.76
VDAC1-206ENST00000489906 RBM33Q96EV2 1170 aaKnown RBP19.79■□□□□ 0.76
VDAC1-206ENST00000489906 KANK1Q14678 1352 aa19.78■□□□□ 0.76
VDAC1-206ENST00000489906 XIRP1Q702N8 1843 aaKnown RBP19.77■□□□□ 0.76
VDAC1-206ENST00000489906 TMEM2Q9UHN6 1383 aa19.77■□□□□ 0.76
VDAC1-206ENST00000489906 IDI1Q13907 227 aa19.76■□□□□ 0.75
VDAC1-206ENST00000489906 SLC26A8Q96RN1 970 aa19.76■□□□□ 0.75
VDAC1-206ENST00000489906 FGD6Q6ZV73 1430 aa19.76■□□□□ 0.75
VDAC1-206ENST00000489906 EFCAB6Q5THR3 1501 aa19.73■□□□□ 0.75
VDAC1-206ENST00000489906 TMEM94Q12767 1356 aa19.72■□□□□ 0.75
VDAC1-206ENST00000489906 ANKRD30AQ9BXX3 1397 aa19.72■□□□□ 0.75
VDAC1-206ENST00000489906 BCANQ96GW7 911 aa19.72■□□□□ 0.75
VDAC1-206ENST00000489906 RGS17Q9UGC6 210 aaPredicted RBP19.7■□□□□ 0.74
VDAC1-206ENST00000489906 FAM50AQ14320 339 aaKnown RBP19.69■□□□□ 0.74
VDAC1-206ENST00000489906 PROSER2Q86WR7 435 aaPredicted RBP19.69■□□□□ 0.74
VDAC1-206ENST00000489906 KCNA6P17658 529 aa19.68■□□□□ 0.74
VDAC1-206ENST00000489906 LMTK2Q8IWU2 1503 aa19.67■□□□□ 0.74
VDAC1-206ENST00000489906 ADGRB3O60242 1522 aa19.66■□□□□ 0.74
VDAC1-206ENST00000489906 NOS1P29475 1434 aa19.65■□□□□ 0.74
VDAC1-206ENST00000489906 TET3O43151 1660 aa19.65■□□□□ 0.74
VDAC1-206ENST00000489906 FAM135BQ49AJ0 1406 aa19.64■□□□□ 0.73
VDAC1-206ENST00000489906 ROBO1Q9Y6N7 1651 aa19.63■□□□□ 0.73
VDAC1-206ENST00000489906 KDM5AP29375 1690 aaKnown RBP19.62■□□□□ 0.73
VDAC1-206ENST00000489906 PPP1R15AO75807 674 aaPredicted RBP19.6■□□□□ 0.73
VDAC1-206ENST00000489906 CHGAP10645 457 aaKnown RBP19.6■□□□□ 0.73
Retrieved 100 of 20,778 RNA–protein pairs in 9.1 ms