RNA–Protein interactions for RNA: ENST00000489731.1

NOTCH2-204, Transcript of notch 2, humanhuman

TSL 5

Gene NOTCH2, Length 414 nt, Biotype processed transcript, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NOTCH2-204ENST00000489731 REREQ9P2R6 1566 aa17.7■□□□□ 0.42
NOTCH2-204ENST00000489731 ARHGEF40Q8TER5 1519 aa17.69■□□□□ 0.42
NOTCH2-204ENST00000489731 SLC4A1APQ9BWU0 796 aaKnown RBP17.69■□□□□ 0.42
NOTCH2-204ENST00000489731 YEATS2Q9ULM3 1422 aa17.69■□□□□ 0.42
NOTCH2-204ENST00000489731 ABCA6Q8N139 1617 aa17.69■□□□□ 0.42
NOTCH2-204ENST00000489731 GRWD1Q9BQ67 446 aaKnown RBP eCLIP17.67■□□□□ 0.42
NOTCH2-204ENST00000489731 ESF1Q9H501 851 aaKnown RBP17.66■□□□□ 0.42
NOTCH2-204ENST00000489731 MPHOSPH9Q99550 1183 aa17.65■□□□□ 0.42
NOTCH2-204ENST00000489731 AGLP35573 1532 aa17.65■□□□□ 0.42
NOTCH2-204ENST00000489731 ARID4BQ4LE39 1312 aaPredicted RBP17.65■□□□□ 0.42
NOTCH2-204ENST00000489731 KDM5DQ9BY66 1539 aa17.64■□□□□ 0.41
NOTCH2-204ENST00000489731 ZEB1P37275 1124 aaPredicted RBP17.64■□□□□ 0.41
NOTCH2-204ENST00000489731 GGT6Q6P531 493 aa17.64■□□□□ 0.41
NOTCH2-204ENST00000489731 UNC13BO14795 1591 aa17.64■□□□□ 0.41
NOTCH2-204ENST00000489731 DHX57Q6P158 1386 aaKnown RBP17.64■□□□□ 0.41
NOTCH2-204ENST00000489731 BCORL1Q5H9F3 1711 aa17.63■□□□□ 0.41
NOTCH2-204ENST00000489731 FAM135AQ9P2D6 1515 aa17.62■□□□□ 0.41
NOTCH2-204ENST00000489731 WASHC2CQ9Y4E1 1318 aa17.61■□□□□ 0.41
NOTCH2-204ENST00000489731 PRDM15P57071 1507 aaPredicted RBP17.6■□□□□ 0.41
NOTCH2-204ENST00000489731 DEPDC5O75140 1603 aa17.59■□□□□ 0.41
NOTCH2-204ENST00000489731 RNF17Q9BXT8 1623 aaKnown RBP17.59■□□□□ 0.41
NOTCH2-204ENST00000489731 IQGAP3Q86VI3 1631 aa17.58■□□□□ 0.4
NOTCH2-204ENST00000489731 PKD2Q13563 968 aa17.57■□□□□ 0.4
NOTCH2-204ENST00000489731 PZPP20742 1482 aa17.55■□□□□ 0.4
NOTCH2-204ENST00000489731 LMTK2Q8IWU2 1503 aa17.54■□□□□ 0.4
NOTCH2-204ENST00000489731 ZC3H13Q5T200 1668 aaKnown RBP17.53■□□□□ 0.4
NOTCH2-204ENST00000489731 CNTLNQ9NXG0 1405 aa17.53■□□□□ 0.4
NOTCH2-204ENST00000489731 RPRD2Q5VT52 1461 aaKnown RBP17.52■□□□□ 0.4
NOTCH2-204ENST00000489731 MLECQ14165 292 aa17.52■□□□□ 0.4
NOTCH2-204ENST00000489731 VWDEQ8N2E2 1590 aa17.52■□□□□ 0.39
NOTCH2-204ENST00000489731 TIMELESSQ9UNS1 1208 aa17.51■□□□□ 0.39
NOTCH2-204ENST00000489731 TET3O43151 1660 aa17.5■□□□□ 0.39
NOTCH2-204ENST00000489731 ABCC3O15438 1527 aa17.48■□□□□ 0.39
NOTCH2-204ENST00000489731 MROH1Q8NDA8 1641 aa17.48■□□□□ 0.39
NOTCH2-204ENST00000489731 ARHGAP31Q2M1Z3 1444 aa17.47■□□□□ 0.39
NOTCH2-204ENST00000489731 EFCAB6Q5THR3 1501 aa17.47■□□□□ 0.39
NOTCH2-204ENST00000489731 ANKRD30BQ9BXX2 1392 aa17.46■□□□□ 0.39
NOTCH2-204ENST00000489731 CCDC144AA2RUR9 1427 aa17.46■□□□□ 0.39
NOTCH2-204ENST00000489731 NEUROD1Q13562 356 aa17.43■□□□□ 0.38
NOTCH2-204ENST00000489731 FOXD1Q16676 465 aa17.43■□□□□ 0.38
NOTCH2-204ENST00000489731 TONSLQ96HA7 1378 aa17.42■□□□□ 0.38
NOTCH2-204ENST00000489731 CAMSAP1Q5T5Y3 1602 aa17.41■□□□□ 0.38
NOTCH2-204ENST00000489731 CEP152O94986 1710 aa17.41■□□□□ 0.38
NOTCH2-204ENST00000489731 NPATQ14207 1427 aa17.4■□□□□ 0.38
NOTCH2-204ENST00000489731 SLC52A1Q9NWF4 448 aa17.4■□□□□ 0.38
NOTCH2-204ENST00000489731 ZMYM3Q14202 1370 aa17.4■□□□□ 0.38
NOTCH2-204ENST00000489731 PTPRTO14522 1441 aa17.39■□□□□ 0.38
NOTCH2-204ENST00000489731 ADAMTSL3P82987 1691 aa17.39■□□□□ 0.37
NOTCH2-204ENST00000489731 E9PCH4 1651 aa17.38■□□□□ 0.37
NOTCH2-204ENST00000489731 TRPM2O94759 1503 aa17.37■□□□□ 0.37
NOTCH2-204ENST00000489731 SIN3AQ96ST3 1273 aa17.37■□□□□ 0.37
NOTCH2-204ENST00000489731 MROH2AA6NES4 1674 aa17.36■□□□□ 0.37
NOTCH2-204ENST00000489731 CLTCQ00610 1675 aaKnown RBP17.36■□□□□ 0.37
NOTCH2-204ENST00000489731 STAC3Q96MF2 364 aa17.36■□□□□ 0.37
NOTCH2-204ENST00000489731 SPHKAPQ2M3C7 1700 aa17.35■□□□□ 0.37
NOTCH2-204ENST00000489731 SIGLEC1Q9BZZ2 1709 aa17.35■□□□□ 0.37
NOTCH2-204ENST00000489731 NOS1P29475 1434 aa17.34■□□□□ 0.37
NOTCH2-204ENST00000489731 FER1L4A9Z1Z3 1794 aa17.33■□□□□ 0.37
NOTCH2-204ENST00000489731 STAG3Q9UJ98 1225 aa17.32■□□□□ 0.36
NOTCH2-204ENST00000489731 ERVK-7P63135 1459 aa17.31■□□□□ 0.36
NOTCH2-204ENST00000489731 PTPRMP28827 1452 aa17.31■□□□□ 0.36
NOTCH2-204ENST00000489731 PLA2R1Q13018 1463 aa17.3■□□□□ 0.36
NOTCH2-204ENST00000489731 MADDQ8WXG6 1647 aa17.29■□□□□ 0.36
NOTCH2-204ENST00000489731 TNRQ92752 1358 aa17.28■□□□□ 0.36
NOTCH2-204ENST00000489731 SPATA31D1Q6ZQQ2 1576 aa17.28■□□□□ 0.36
NOTCH2-204ENST00000489731 NEURL4Q96JN8 1562 aa17.28■□□□□ 0.36
NOTCH2-204ENST00000489731 CHGAP10645 457 aaKnown RBP17.28■□□□□ 0.36
NOTCH2-204ENST00000489731 HDGFP51858 240 aaKnown RBP17.28■□□□□ 0.36
NOTCH2-204ENST00000489731 PREX1Q8TCU6 1659 aa17.28■□□□□ 0.36
NOTCH2-204ENST00000489731 RPGRIP1LQ68CZ1 1315 aa17.27■□□□□ 0.36
NOTCH2-204ENST00000489731 ZNF326Q5BKZ1 582 aaKnown RBP17.26■□□□□ 0.35
NOTCH2-204ENST00000489731 FBXO31Q5XUX0 539 aaPredicted RBP17.26■□□□□ 0.35
NOTCH2-204ENST00000489731 NLRP1Q9C000 1473 aa17.25■□□□□ 0.35
NOTCH2-204ENST00000489731 IDI1Q13907 227 aa17.24■□□□□ 0.35
NOTCH2-204ENST00000489731 RGL3Q3MIN7 710 aa17.24■□□□□ 0.35
NOTCH2-204ENST00000489731 L3MBTL2Q969R5 705 aa17.24■□□□□ 0.35
NOTCH2-204ENST00000489731 RIMS1Q86UR5 1692 aaKnown RBP17.23■□□□□ 0.35
NOTCH2-204ENST00000489731 CLTCL1P53675 1640 aa17.23■□□□□ 0.35
NOTCH2-204ENST00000489731 KIF1BO60333 1816 aa17.23■□□□□ 0.35
NOTCH2-204ENST00000489731 PPP1R15AO75807 674 aaPredicted RBP17.22■□□□□ 0.35
NOTCH2-204ENST00000489731 PLPPR3Q6T4P5 718 aa17.22■□□□□ 0.35
NOTCH2-204ENST00000489731 DCAF11Q8TEB1 546 aa17.22■□□□□ 0.35
NOTCH2-204ENST00000489731 CFAP65Q6ZU64 1925 aaKnown RBP17.21■□□□□ 0.35
NOTCH2-204ENST00000489731 SYNMO15061 1565 aa17.21■□□□□ 0.35
NOTCH2-204ENST00000489731 CEBPAP49715 358 aaPredicted RBP17.21■□□□□ 0.35
NOTCH2-204ENST00000489731 PIK3C2BO00750 1634 aa17.21■□□□□ 0.35
NOTCH2-204ENST00000489731 SPATA31E1Q6ZUB1 1445 aa17.21■□□□□ 0.34
NOTCH2-204ENST00000489731 C3P01024 1663 aa17.2■□□□□ 0.34
NOTCH2-204ENST00000489731 VGFO15240 615 aaPredicted RBP17.2■□□□□ 0.34
NOTCH2-204ENST00000489731 ABCF1Q8NE71 845 aaKnown RBP eCLIP17.2■□□□□ 0.34
NOTCH2-204ENST00000489731 ADGRB3O60242 1522 aa17.18■□□□□ 0.34
NOTCH2-204ENST00000489731 THEMISQ8N1K5 641 aaPredicted RBP17.18■□□□□ 0.34
NOTCH2-204ENST00000489731 UGGT1Q9NYU2 1555 aa17.16■□□□□ 0.34
NOTCH2-204ENST00000489731 KDM2AQ9Y2K7 1162 aa17.16■□□□□ 0.34
NOTCH2-204ENST00000489731 LMTK3Q96Q04 1460 aa17.15■□□□□ 0.34
NOTCH2-204ENST00000489731 KDM5AP29375 1690 aaKnown RBP17.15■□□□□ 0.34
NOTCH2-204ENST00000489731 SETD1BQ9UPS6 1966 aaKnown RBP17.15■□□□□ 0.34
NOTCH2-204ENST00000489731 EID1Q9Y6B2 187 aa17.14■□□□□ 0.33
NOTCH2-204ENST00000489731 UHRF1BP1Q6BDS2 1440 aa17.13■□□□□ 0.33
NOTCH2-204ENST00000489731 A2ML1A8K2U0 1454 aa17.13■□□□□ 0.33
Retrieved 100 of 20,778 RNA–protein pairs in 25.3 ms