RNA–Protein interactions for RNA: ENST00000489611.5

COL9A1-208, Transcript of collagen type IX alpha 1 chain, humanhuman

TSL 2

Gene COL9A1, Length 1,940 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL9A1-208ENST00000489611 FAM135AQ9P2D6 1515 aa20.79■□□□□ 0.92
COL9A1-208ENST00000489611 DUOX2Q9NRD8 1548 aa20.78■□□□□ 0.92
COL9A1-208ENST00000489611 GLI2P10070 1586 aa20.78■□□□□ 0.92
COL9A1-208ENST00000489611 DIP2BQ9P265 1576 aa20.77■□□□□ 0.92
COL9A1-208ENST00000489611 SPAG9O60271 1321 aaKnown RBP20.77■□□□□ 0.92
COL9A1-208ENST00000489611 RALGAPBQ86X10 1494 aa20.77■□□□□ 0.91
COL9A1-208ENST00000489611 MAP3K4Q9Y6R4 1608 aa20.76■□□□□ 0.91
COL9A1-208ENST00000489611 ERBINQ96RT1 1412 aa20.75■□□□□ 0.91
COL9A1-208ENST00000489611 IQGAP3Q86VI3 1631 aa20.75■□□□□ 0.91
COL9A1-208ENST00000489611 KDM5CP41229 1560 aa20.73■□□□□ 0.91
COL9A1-208ENST00000489611 MAGI2Q86UL8 1455 aa20.71■□□□□ 0.91
COL9A1-208ENST00000489611 CFAP74Q9C0B2 1584 aa20.71■□□□□ 0.91
COL9A1-208ENST00000489611 MYT1LQ9UL68 1186 aa20.71■□□□□ 0.91
COL9A1-208ENST00000489611 NEO1Q92859 1461 aa20.71■□□□□ 0.91
COL9A1-208ENST00000489611 USP47Q96K76 1375 aa20.7■□□□□ 0.9
COL9A1-208ENST00000489611 RTEL1-TNFRSF6BF6WH68 1400 aa20.7■□□□□ 0.9
COL9A1-208ENST00000489611 SUPT16HQ9Y5B9 1047 aaKnown RBP20.7■□□□□ 0.9
COL9A1-208ENST00000489611 ZFYVE16Q7Z3T8 1539 aa20.69■□□□□ 0.9
COL9A1-208ENST00000489611 KIF7Q2M1P5 1343 aa20.68■□□□□ 0.9
COL9A1-208ENST00000489611 ATP10AO60312 1499 aa20.68■□□□□ 0.9
COL9A1-208ENST00000489611 ZNF518AQ6AHZ1 1483 aa20.68■□□□□ 0.9
COL9A1-208ENST00000489611 ROCK2O75116 1388 aaKnown RBP20.68■□□□□ 0.9
COL9A1-208ENST00000489611 CCDC144AA2RUR9 1427 aa20.68■□□□□ 0.9
COL9A1-208ENST00000489611 RAPGEF3O95398 923 aa20.67■□□□□ 0.9
COL9A1-208ENST00000489611 POGZQ7Z3K3 1410 aa20.67■□□□□ 0.9
COL9A1-208ENST00000489611 ATP7AQ04656 1500 aa20.66■□□□□ 0.9
COL9A1-208ENST00000489611 C11orf95C9JLR9 678 aaPredicted RBP20.65■□□□□ 0.9
COL9A1-208ENST00000489611 INO80Q9ULG1 1556 aaPredicted RBP20.65■□□□□ 0.9
COL9A1-208ENST00000489611 PRKRIP1Q9H875 184 aaPredicted RBP20.65■□□□□ 0.9
COL9A1-208ENST00000489611 TSPOAP1O95153 1857 aa20.62■□□□□ 0.89
COL9A1-208ENST00000489611 GRWD1Q9BQ67 446 aaKnown RBP eCLIP20.61■□□□□ 0.89
COL9A1-208ENST00000489611 LAMC1P11047 1609 aa20.61■□□□□ 0.89
COL9A1-208ENST00000489611 PPRC1Q5VV67 1664 aaKnown RBP20.61■□□□□ 0.89
COL9A1-208ENST00000489611 KIF13AQ9H1H9 1805 aa20.6■□□□□ 0.89
COL9A1-208ENST00000489611 BCORL1Q5H9F3 1711 aa20.6■□□□□ 0.89
COL9A1-208ENST00000489611 EIF2AK4Q9P2K8 1649 aaKnown RBP20.59■□□□□ 0.89
COL9A1-208ENST00000489611 CARD11Q9BXL7 1154 aa20.59■□□□□ 0.89
COL9A1-208ENST00000489611 KIDINS220Q9ULH0 1771 aa20.59■□□□□ 0.89
COL9A1-208ENST00000489611 ZNF326Q5BKZ1 582 aaKnown RBP20.59■□□□□ 0.89
COL9A1-208ENST00000489611 TRPM1Q7Z4N2 1603 aa20.58■□□□□ 0.88
COL9A1-208ENST00000489611 NEFLP07196 543 aa20.57■□□□□ 0.88
COL9A1-208ENST00000489611 DCAF11Q8TEB1 546 aa20.57■□□□□ 0.88
COL9A1-208ENST00000489611 MLH3Q9UHC1 1453 aa20.57■□□□□ 0.88
COL9A1-208ENST00000489611 PRAG1Q86YV5 1406 aa20.56■□□□□ 0.88
COL9A1-208ENST00000489611 DHX29Q7Z478 1369 aaKnown RBP20.56■□□□□ 0.88
COL9A1-208ENST00000489611 PLA2R1Q13018 1463 aa20.56■□□□□ 0.88
COL9A1-208ENST00000489611 HECW2Q9P2P5 1572 aa20.55■□□□□ 0.88
COL9A1-208ENST00000489611 DEPDC5O75140 1603 aa20.54■□□□□ 0.88
COL9A1-208ENST00000489611 KTN1Q86UP2 1357 aaKnown RBP20.54■□□□□ 0.88
COL9A1-208ENST00000489611 KIF3BO15066 747 aa20.53■□□□□ 0.88
COL9A1-208ENST00000489611 STAC3Q96MF2 364 aa20.53■□□□□ 0.88
COL9A1-208ENST00000489611 GPRASP1Q5JY77 1395 aa20.53■□□□□ 0.88
COL9A1-208ENST00000489611 RICTORQ6R327 1708 aa20.53■□□□□ 0.88
COL9A1-208ENST00000489611 HNRNPUQ00839 825 aaKnown RBP eCLIP20.52■□□□□ 0.88
COL9A1-208ENST00000489611 FRMPD1Q5SYB0 1578 aa20.51■□□□□ 0.87
COL9A1-208ENST00000489611 A2MP01023 1474 aa20.51■□□□□ 0.87
COL9A1-208ENST00000489611 MRS2Q9HD23 443 aa20.49■□□□□ 0.87
COL9A1-208ENST00000489611 YEATS2Q9ULM3 1422 aa20.49■□□□□ 0.87
COL9A1-208ENST00000489611 KDM2AQ9Y2K7 1162 aa20.49■□□□□ 0.87
COL9A1-208ENST00000489611 ABCA6Q8N139 1617 aa20.49■□□□□ 0.87
COL9A1-208ENST00000489611 TRHP20396 242 aaPredicted RBP20.48■□□□□ 0.87
COL9A1-208ENST00000489611 COL17A1Q9UMD9 1497 aaPredicted RBP20.47■□□□□ 0.87
COL9A1-208ENST00000489611 TET3O43151 1660 aa20.47■□□□□ 0.87
COL9A1-208ENST00000489611 TRPM2O94759 1503 aa20.47■□□□□ 0.87
COL9A1-208ENST00000489611 PRDM15P57071 1507 aaPredicted RBP20.46■□□□□ 0.87
COL9A1-208ENST00000489611 E9PCH4 1651 aa20.46■□□□□ 0.87
COL9A1-208ENST00000489611 NEURL4Q96JN8 1562 aa20.46■□□□□ 0.87
COL9A1-208ENST00000489611 KANK1Q14678 1352 aa20.45■□□□□ 0.86
COL9A1-208ENST00000489611 ST20-MTHFSA0A0A6YYL1 179 aa20.45■□□□□ 0.86
COL9A1-208ENST00000489611 VWDEQ8N2E2 1590 aa20.44■□□□□ 0.86
COL9A1-208ENST00000489611 DIP2CQ9Y2E4 1556 aa20.44■□□□□ 0.86
COL9A1-208ENST00000489611 FKBP8Q14318 412 aa20.44■□□□□ 0.86
COL9A1-208ENST00000489611 SPHKAPQ2M3C7 1700 aa20.44■□□□□ 0.86
COL9A1-208ENST00000489611 CEP152O94986 1710 aa20.43■□□□□ 0.86
COL9A1-208ENST00000489611 PTPRTO14522 1441 aa20.43■□□□□ 0.86
COL9A1-208ENST00000489611 ZBED9Q6R2W3 1325 aa20.43■□□□□ 0.86
COL9A1-208ENST00000489611 ZMYM4Q5VZL5 1548 aa20.42■□□□□ 0.86
COL9A1-208ENST00000489611 RNF17Q9BXT8 1623 aaKnown RBP20.42■□□□□ 0.86
COL9A1-208ENST00000489611 ERICH6BQ5W0A0 696 aa20.41■□□□□ 0.86
COL9A1-208ENST00000489611 GGT6Q6P531 493 aa20.41■□□□□ 0.86
COL9A1-208ENST00000489611 MROH1Q8NDA8 1641 aa20.4■□□□□ 0.86
COL9A1-208ENST00000489611 RALBP1Q15311 655 aa20.38■□□□□ 0.85
COL9A1-208ENST00000489611 RGL3Q3MIN7 710 aa20.38■□□□□ 0.85
COL9A1-208ENST00000489611 WASHC2CQ9Y4E1 1318 aa20.38■□□□□ 0.85
COL9A1-208ENST00000489611 CCDC184Q52MB2 194 aa20.37■□□□□ 0.85
COL9A1-208ENST00000489611 FAM9BQ8IZU0 186 aa20.37■□□□□ 0.85
COL9A1-208ENST00000489611 POLR3GLQ9BT43 218 aa20.35■□□□□ 0.85
COL9A1-208ENST00000489611 MADDQ8WXG6 1647 aa20.35■□□□□ 0.85
COL9A1-208ENST00000489611 BRD4O60885 1362 aaPredicted RBP20.34■□□□□ 0.85
COL9A1-208ENST00000489611 KIAA1210Q9ULL0 1709 aa20.34■□□□□ 0.85
COL9A1-208ENST00000489611 CLTCL1P53675 1640 aa20.32■□□□□ 0.84
COL9A1-208ENST00000489611 LMTK2Q8IWU2 1503 aa20.32■□□□□ 0.84
COL9A1-208ENST00000489611 MYBBP1AQ9BQG0 1328 aaKnown RBP20.31■□□□□ 0.84
COL9A1-208ENST00000489611 NBPF1Q3BBV0 1214 aa20.3■□□□□ 0.84
COL9A1-208ENST00000489611 IQGAP1P46940 1657 aa20.3■□□□□ 0.84
COL9A1-208ENST00000489611 SLC24A1O60721 1099 aa20.29■□□□□ 0.84
COL9A1-208ENST00000489611 TMF1P82094 1093 aa20.29■□□□□ 0.84
COL9A1-208ENST00000489611 EFCAB6Q5THR3 1501 aa20.28■□□□□ 0.84
COL9A1-208ENST00000489611 TMC1Q8TDI8 760 aa20.28■□□□□ 0.84
COL9A1-208ENST00000489611 TESK2Q96S53 571 aa20.28■□□□□ 0.84
Retrieved 100 of 20,778 RNA–protein pairs in 24.1 ms