RNA–Protein interactions for RNA: ENST00000489583.1

APTX-229, Transcript of aprataxin, humanhuman

TSL 3

Gene APTX, Length 397 nt, Biotype processed transcript, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
APTX-229ENST00000489583 ZNF335Q9H4Z2 1342 aaPredicted RBP30.71■■■□□ 2.51
APTX-229ENST00000489583 TNRQ92752 1358 aa30.7■■■□□ 2.51
APTX-229ENST00000489583 KDM5DQ9BY66 1539 aa30.7■■■□□ 2.51
APTX-229ENST00000489583 FAM135AQ9P2D6 1515 aa30.7■■■□□ 2.51
APTX-229ENST00000489583 VPS8Q8N3P4 1428 aa30.69■■■□□ 2.5
APTX-229ENST00000489583 TCOF1Q13428 1488 aaKnown RBP30.68■■■□□ 2.5
APTX-229ENST00000489583 UBAP1LF5GYI3 381 aa30.67■■■□□ 2.5
APTX-229ENST00000489583 LRRC9Q6ZRR7 1453 aa30.65■■■□□ 2.5
APTX-229ENST00000489583 FBXO31Q5XUX0 539 aaPredicted RBP30.65■■■□□ 2.5
APTX-229ENST00000489583 ARHGEF5Q12774 1597 aa30.65■■■□□ 2.5
APTX-229ENST00000489583 PZPP20742 1482 aa30.64■■■□□ 2.5
APTX-229ENST00000489583 LOC105371045A0A1W2PR82 267 aa30.64■■■□□ 2.5
APTX-229ENST00000489583 APLP2Q06481 763 aa30.63■■■□□ 2.49
APTX-229ENST00000489583 THEMISQ8N1K5 641 aaPredicted RBP30.63■■■□□ 2.49
APTX-229ENST00000489583 ANKLE2Q86XL3 938 aa30.61■■■□□ 2.49
APTX-229ENST00000489583 DNMT1P26358 1616 aaKnown RBP30.61■■■□□ 2.49
APTX-229ENST00000489583 MIA2Q96PC5 1412 aa30.56■■■□□ 2.48
APTX-229ENST00000489583 NLRP1Q9C000 1473 aa30.55■■■□□ 2.48
APTX-229ENST00000489583 MAP3K1Q13233 1512 aa30.52■■■□□ 2.48
APTX-229ENST00000489583 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP30.52■■■□□ 2.48
APTX-229ENST00000489583 SCAF1Q9H7N4 1312 aaKnown RBP30.51■■■□□ 2.48
APTX-229ENST00000489583 MYOM3Q5VTT5 1437 aa30.51■■■□□ 2.47
APTX-229ENST00000489583 KANK4Q5T7N3 995 aaPredicted RBP30.5■■■□□ 2.47
APTX-229ENST00000489583 SPATA31D1Q6ZQQ2 1576 aa30.49■■■□□ 2.47
APTX-229ENST00000489583 UGGT1Q9NYU2 1555 aa30.49■■■□□ 2.47
APTX-229ENST00000489583 POLR1AO95602 1720 aaPredicted RBP30.49■■■□□ 2.47
APTX-229ENST00000489583 TOM1O60784 492 aa30.48■■■□□ 2.47
APTX-229ENST00000489583 MAST1Q9Y2H9 1570 aa30.48■■■□□ 2.47
APTX-229ENST00000489583 CPS1P31327 1500 aa30.46■■■□□ 2.47
APTX-229ENST00000489583 ZC3H13Q5T200 1668 aaKnown RBP30.44■■■□□ 2.46
APTX-229ENST00000489583 RNF17Q9BXT8 1623 aaKnown RBP30.44■■■□□ 2.46
APTX-229ENST00000489583 EIF2AK4Q9P2K8 1649 aaKnown RBP30.44■■■□□ 2.46
APTX-229ENST00000489583 SHANK2Q9UPX8 1470 aa30.43■■■□□ 2.46
APTX-229ENST00000489583 PIP4K2BP78356 416 aa30.42■■■□□ 2.46
APTX-229ENST00000489583 ILDR2Q71H61 639 aa30.42■■■□□ 2.46
APTX-229ENST00000489583 ABCC3O15438 1527 aa30.41■■■□□ 2.46
APTX-229ENST00000489583 NPHP4O75161 1426 aaPredicted RBP30.4■■■□□ 2.46
APTX-229ENST00000489583 SOCS7O14512 581 aa30.4■■■□□ 2.46
APTX-229ENST00000489583 DUOX2Q9NRD8 1548 aa30.4■■■□□ 2.46
APTX-229ENST00000489583 NEURL4Q96JN8 1562 aa30.38■■■□□ 2.45
APTX-229ENST00000489583 KIF15Q9NS87 1388 aa30.36■■■□□ 2.45
APTX-229ENST00000489583 RRP7BPQ9NSQ0 103 aa30.35■■■□□ 2.45
APTX-229ENST00000489583 DEPDC5O75140 1603 aa30.35■■■□□ 2.45
APTX-229ENST00000489583 ERVK-7P63135 1459 aa30.34■■■□□ 2.45
APTX-229ENST00000489583 MED14O60244 1454 aa30.33■■■□□ 2.45
APTX-229ENST00000489583 KANK1Q14678 1352 aa30.33■■■□□ 2.45
APTX-229ENST00000489583 GRWD1Q9BQ67 446 aaKnown RBP eCLIP30.33■■■□□ 2.45
APTX-229ENST00000489583 ERBINQ96RT1 1412 aa30.3■■■□□ 2.44
APTX-229ENST00000489583 STAG3Q9UJ98 1225 aa30.29■■■□□ 2.44
APTX-229ENST00000489583 EID1Q9Y6B2 187 aa30.29■■■□□ 2.44
APTX-229ENST00000489583 IQGAP1P46940 1657 aa30.28■■■□□ 2.44
APTX-229ENST00000489583 PTPN23Q9H3S7 1636 aa30.27■■■□□ 2.44
APTX-229ENST00000489583 CEP152O94986 1710 aa30.26■■■□□ 2.43
APTX-229ENST00000489583 ABCC5O15440 1437 aa30.25■■■□□ 2.43
APTX-229ENST00000489583 HSPA1LP34931 641 aa30.25■■■□□ 2.43
APTX-229ENST00000489583 VWDEQ8N2E2 1590 aa30.24■■■□□ 2.43
APTX-229ENST00000489583 ANKRD30AQ9BXX3 1397 aa30.24■■■□□ 2.43
APTX-229ENST00000489583 MROH1Q8NDA8 1641 aa30.23■■■□□ 2.43
APTX-229ENST00000489583 TXNDC2Q86VQ3 553 aa30.23■■■□□ 2.43
APTX-229ENST00000489583 DAPK1P53355 1430 aa30.22■■■□□ 2.43
APTX-229ENST00000489583 ARHGAP31Q2M1Z3 1444 aa30.22■■■□□ 2.43
APTX-229ENST00000489583 CHIC2Q9UKJ5 165 aa30.21■■■□□ 2.43
APTX-229ENST00000489583 FGD6Q6ZV73 1430 aa30.21■■■□□ 2.43
APTX-229ENST00000489583 CROCC2H7BZ55 1655 aa30.2■■■□□ 2.43
APTX-229ENST00000489583 CFAP65Q6ZU64 1925 aaKnown RBP30.2■■■□□ 2.43
APTX-229ENST00000489583 SCAF11Q99590 1463 aaKnown RBP30.2■■■□□ 2.43
APTX-229ENST00000489583 PRDM15P57071 1507 aaPredicted RBP30.2■■■□□ 2.42
APTX-229ENST00000489583 UBR1Q8IWV7 1749 aa30.16■■■□□ 2.42
APTX-229ENST00000489583 FAM50AQ14320 339 aaKnown RBP30.12■■■□□ 2.41
APTX-229ENST00000489583 PHF23Q9BUL5 403 aaPredicted RBP30.12■■■□□ 2.41
APTX-229ENST00000489583 SYNMO15061 1565 aa30.11■■■□□ 2.41
APTX-229ENST00000489583 LTKP29376 864 aa30.11■■■□□ 2.41
APTX-229ENST00000489583 SLIT1O75093 1534 aa30.1■■■□□ 2.41
APTX-229ENST00000489583 LRRC7Q96NW7 1537 aa30.1■■■□□ 2.41
APTX-229ENST00000489583 SENP3Q9H4L4 574 aaPredicted RBP30.09■■■□□ 2.41
APTX-229ENST00000489583 ARHGAP23Q9P227 1491 aa30.07■■■□□ 2.4
APTX-229ENST00000489583 TMEM2Q9UHN6 1383 aa30.06■■■□□ 2.4
APTX-229ENST00000489583 BCANQ96GW7 911 aa30.04■■■□□ 2.4
APTX-229ENST00000489583 MED1Q15648 1581 aaPredicted RBP30.03■■■□□ 2.4
APTX-229ENST00000489583 IDI1Q13907 227 aa30.03■■■□□ 2.4
APTX-229ENST00000489583 PIK3C2BO00750 1634 aa30.03■■■□□ 2.4
APTX-229ENST00000489583 EFCAB6Q5THR3 1501 aa30.01■■■□□ 2.4
APTX-229ENST00000489583 LMTK2Q8IWU2 1503 aa30.01■■■□□ 2.4
APTX-229ENST00000489583 SLC52A1Q9NWF4 448 aa30.01■■■□□ 2.39
APTX-229ENST00000489583 STRCP1A6NGW2 1772 aa29.99■■■□□ 2.39
APTX-229ENST00000489583 HDGFP51858 240 aaKnown RBP29.97■■■□□ 2.39
APTX-229ENST00000489583 KDM5AP29375 1690 aaKnown RBP29.95■■■□□ 2.39
APTX-229ENST00000489583 ADGRL2O95490 1459 aa29.95■■■□□ 2.39
APTX-229ENST00000489583 ANKRD50Q9ULJ7 1429 aa29.95■■■□□ 2.38
APTX-229ENST00000489583 PPP1R15AO75807 674 aaPredicted RBP29.92■■■□□ 2.38
APTX-229ENST00000489583 KCNA6P17658 529 aa29.92■■■□□ 2.38
APTX-229ENST00000489583 PROSER2Q86WR7 435 aaPredicted RBP29.92■■■□□ 2.38
APTX-229ENST00000489583 SLC26A8Q96RN1 970 aa29.92■■■□□ 2.38
APTX-229ENST00000489583 ALKQ9UM73 1620 aa29.92■■■□□ 2.38
APTX-229ENST00000489583 NOS1P29475 1434 aa29.9■■■□□ 2.38
APTX-229ENST00000489583 RPRD2Q5VT52 1461 aaKnown RBP29.89■■■□□ 2.38
APTX-229ENST00000489583 ADGRB3O60242 1522 aa29.88■■■□□ 2.37
APTX-229ENST00000489583 TMEM94Q12767 1356 aa29.86■■■□□ 2.37
APTX-229ENST00000489583 CHGAP10645 457 aaKnown RBP29.83■■■□□ 2.37
APTX-229ENST00000489583 FAM135BQ49AJ0 1406 aa29.8■■■□□ 2.36
Retrieved 100 of 20,778 RNA–protein pairs in 13.9 ms