RNA–Protein interactions for RNA: ENST00000489453.1

CHKB-211, Transcript of choline kinase beta, humanhuman

TSL 2

Gene CHKB, Length 722 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHKB-211ENST00000489453 TCOF1Q13428 1488 aaKnown RBP16.57■□□□□ 0.24
CHKB-211ENST00000489453 ZNF335Q9H4Z2 1342 aaPredicted RBP16.57■□□□□ 0.24
CHKB-211ENST00000489453 KIF3BO15066 747 aa16.56■□□□□ 0.24
CHKB-211ENST00000489453 RSPH4AQ5TD94 716 aa16.55■□□□□ 0.24
CHKB-211ENST00000489453 TNRQ92752 1358 aa16.54■□□□□ 0.24
CHKB-211ENST00000489453 ARHGEF5Q12774 1597 aa16.54■□□□□ 0.24
CHKB-211ENST00000489453 UBAP1LF5GYI3 381 aa16.53■□□□□ 0.24
CHKB-211ENST00000489453 PZPP20742 1482 aa16.53■□□□□ 0.24
CHKB-211ENST00000489453 WASHC2CQ9Y4E1 1318 aa16.52■□□□□ 0.24
CHKB-211ENST00000489453 TSPY4P0CV99 314 aa16.52■□□□□ 0.24
CHKB-211ENST00000489453 TSPY10P0CW01 314 aa16.52■□□□□ 0.24
CHKB-211ENST00000489453 ILDR2Q71H61 639 aa16.49■□□□□ 0.23
CHKB-211ENST00000489453 ZC3H13Q5T200 1668 aaKnown RBP16.49■□□□□ 0.23
CHKB-211ENST00000489453 CFAP65Q6ZU64 1925 aaKnown RBP16.49■□□□□ 0.23
CHKB-211ENST00000489453 FBXO31Q5XUX0 539 aaPredicted RBP16.48■□□□□ 0.23
CHKB-211ENST00000489453 LRRC9Q6ZRR7 1453 aa16.48■□□□□ 0.23
CHKB-211ENST00000489453 NEURL4Q96JN8 1562 aa16.47■□□□□ 0.23
CHKB-211ENST00000489453 VPS8Q8N3P4 1428 aa16.47■□□□□ 0.23
CHKB-211ENST00000489453 RNF17Q9BXT8 1623 aaKnown RBP16.47■□□□□ 0.23
CHKB-211ENST00000489453 NLRP1Q9C000 1473 aa16.47■□□□□ 0.23
CHKB-211ENST00000489453 MAST1Q9Y2H9 1570 aa16.47■□□□□ 0.23
CHKB-211ENST00000489453 CPS1P31327 1500 aa16.46■□□□□ 0.23
CHKB-211ENST00000489453 EIF2AK4Q9P2K8 1649 aaKnown RBP16.46■□□□□ 0.23
CHKB-211ENST00000489453 SCAF1Q9H7N4 1312 aaKnown RBP16.45■□□□□ 0.22
CHKB-211ENST00000489453 SOCS7O14512 581 aa16.45■□□□□ 0.22
CHKB-211ENST00000489453 UGGT1Q9NYU2 1555 aa16.45■□□□□ 0.22
CHKB-211ENST00000489453 ANKLE2Q86XL3 938 aa16.44■□□□□ 0.22
CHKB-211ENST00000489453 THEMISQ8N1K5 641 aaPredicted RBP16.44■□□□□ 0.22
CHKB-211ENST00000489453 CEP152O94986 1710 aa16.44■□□□□ 0.22
CHKB-211ENST00000489453 MIA2Q96PC5 1412 aa16.44■□□□□ 0.22
CHKB-211ENST00000489453 DEPDC5O75140 1603 aa16.43■□□□□ 0.22
CHKB-211ENST00000489453 IQGAP1P46940 1657 aa16.43■□□□□ 0.22
CHKB-211ENST00000489453 SHANK2Q9UPX8 1470 aa16.42■□□□□ 0.22
CHKB-211ENST00000489453 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP16.42■□□□□ 0.22
CHKB-211ENST00000489453 ABCC3O15438 1527 aa16.42■□□□□ 0.22
CHKB-211ENST00000489453 NPHP4O75161 1426 aaPredicted RBP16.4■□□□□ 0.22
CHKB-211ENST00000489453 PIP4K2BP78356 416 aa16.4■□□□□ 0.22
CHKB-211ENST00000489453 MAP3K1Q13233 1512 aa16.4■□□□□ 0.22
CHKB-211ENST00000489453 MYOM3Q5VTT5 1437 aa16.39■□□□□ 0.21
CHKB-211ENST00000489453 TOM1O60784 492 aa16.39■□□□□ 0.21
CHKB-211ENST00000489453 VWDEQ8N2E2 1590 aa16.38■□□□□ 0.21
CHKB-211ENST00000489453 CROCC2H7BZ55 1655 aa16.38■□□□□ 0.21
CHKB-211ENST00000489453 DUOX2Q9NRD8 1548 aa16.38■□□□□ 0.21
CHKB-211ENST00000489453 ERVK-7P63135 1459 aa16.37■□□□□ 0.21
CHKB-211ENST00000489453 LOC105371045A0A1W2PR82 267 aa16.37■□□□□ 0.21
CHKB-211ENST00000489453 MROH1Q8NDA8 1641 aa16.37■□□□□ 0.21
CHKB-211ENST00000489453 MED14O60244 1454 aa16.36■□□□□ 0.21
CHKB-211ENST00000489453 UBR1Q8IWV7 1749 aa16.36■□□□□ 0.21
CHKB-211ENST00000489453 KANK4Q5T7N3 995 aaPredicted RBP16.35■□□□□ 0.21
CHKB-211ENST00000489453 APLP2Q06481 763 aa16.34■□□□□ 0.21
CHKB-211ENST00000489453 SYNMO15061 1565 aa16.34■□□□□ 0.21
CHKB-211ENST00000489453 PTPN23Q9H3S7 1636 aa16.34■□□□□ 0.21
CHKB-211ENST00000489453 HSPA1LP34931 641 aa16.33■□□□□ 0.2
CHKB-211ENST00000489453 STRCP1A6NGW2 1772 aa16.33■□□□□ 0.2
CHKB-211ENST00000489453 MED1Q15648 1581 aaPredicted RBP16.32■□□□□ 0.2
CHKB-211ENST00000489453 PRDM15P57071 1507 aaPredicted RBP16.31■□□□□ 0.2
CHKB-211ENST00000489453 KIF15Q9NS87 1388 aa16.31■□□□□ 0.2
CHKB-211ENST00000489453 ERBINQ96RT1 1412 aa16.3■□□□□ 0.2
CHKB-211ENST00000489453 SCAF11Q99590 1463 aaKnown RBP16.29■□□□□ 0.2
CHKB-211ENST00000489453 RRP7BPQ9NSQ0 103 aa16.28■□□□□ 0.2
CHKB-211ENST00000489453 KANK1Q14678 1352 aa16.27■□□□□ 0.2
CHKB-211ENST00000489453 GRWD1Q9BQ67 446 aaKnown RBP eCLIP16.27■□□□□ 0.27e-9■■■■□ 23.2
CHKB-211ENST00000489453 LRRC7Q96NW7 1537 aa16.27■□□□□ 0.2
CHKB-211ENST00000489453 ABCC5O15440 1437 aa16.27■□□□□ 0.19
CHKB-211ENST00000489453 PIK3C2BO00750 1634 aa16.27■□□□□ 0.19
CHKB-211ENST00000489453 PHF23Q9BUL5 403 aaPredicted RBP16.25■□□□□ 0.19
CHKB-211ENST00000489453 SENP3Q9H4L4 574 aaPredicted RBP16.25■□□□□ 0.19
CHKB-211ENST00000489453 STAG3Q9UJ98 1225 aa16.25■□□□□ 0.19
CHKB-211ENST00000489453 EID1Q9Y6B2 187 aa16.25■□□□□ 0.19
CHKB-211ENST00000489453 DAPK1P53355 1430 aa16.25■□□□□ 0.19
CHKB-211ENST00000489453 ARHGAP31Q2M1Z3 1444 aa16.25■□□□□ 0.19
CHKB-211ENST00000489453 SLIT1O75093 1534 aa16.24■□□□□ 0.19
CHKB-211ENST00000489453 ALKQ9UM73 1620 aa16.24■□□□□ 0.19
CHKB-211ENST00000489453 TXNDC2Q86VQ3 553 aa16.24■□□□□ 0.19
CHKB-211ENST00000489453 FGD6Q6ZV73 1430 aa16.23■□□□□ 0.19
CHKB-211ENST00000489453 ARHGAP23Q9P227 1491 aa16.22■□□□□ 0.19
CHKB-211ENST00000489453 XIRP1Q702N8 1843 aaKnown RBP16.22■□□□□ 0.19
CHKB-211ENST00000489453 KDM5AP29375 1690 aaKnown RBP16.22■□□□□ 0.19
CHKB-211ENST00000489453 ANKRD30AQ9BXX3 1397 aa16.22■□□□□ 0.19
CHKB-211ENST00000489453 CHIC2Q9UKJ5 165 aa16.2■□□□□ 0.18
CHKB-211ENST00000489453 EFCAB6Q5THR3 1501 aa16.19■□□□□ 0.18
CHKB-211ENST00000489453 LTKP29376 864 aa16.19■□□□□ 0.18
CHKB-211ENST00000489453 LMTK2Q8IWU2 1503 aa16.18■□□□□ 0.18
CHKB-211ENST00000489453 TMEM2Q9UHN6 1383 aa16.17■□□□□ 0.18
CHKB-211ENST00000489453 ADGRB3O60242 1522 aa16.15■□□□□ 0.18
CHKB-211ENST00000489453 MYO5BQ9ULV0 1848 aa16.15■□□□□ 0.18
CHKB-211ENST00000489453 BCANQ96GW7 911 aa16.13■□□□□ 0.17
CHKB-211ENST00000489453 IDI1Q13907 227 aa16.12■□□□□ 0.17
CHKB-211ENST00000489453 FAM50AQ14320 339 aaKnown RBP16.12■□□□□ 0.17
CHKB-211ENST00000489453 GCC2Q8IWJ2 1684 aa16.11■□□□□ 0.17
CHKB-211ENST00000489453 ADGRL2O95490 1459 aa16.11■□□□□ 0.17
CHKB-211ENST00000489453 TET3O43151 1660 aa16.11■□□□□ 0.17
CHKB-211ENST00000489453 NOS1P29475 1434 aa16.1■□□□□ 0.17
CHKB-211ENST00000489453 TMEM94Q12767 1356 aa16.09■□□□□ 0.17
CHKB-211ENST00000489453 ROBO1Q9Y6N7 1651 aa16.08■□□□□ 0.17
CHKB-211ENST00000489453 KCNA6P17658 529 aa16.08■□□□□ 0.16
CHKB-211ENST00000489453 PROSER2Q86WR7 435 aaPredicted RBP16.08■□□□□ 0.16
CHKB-211ENST00000489453 SLC26A8Q96RN1 970 aa16.08■□□□□ 0.16
CHKB-211ENST00000489453 SLC52A1Q9NWF4 448 aa16.08■□□□□ 0.16
CHKB-211ENST00000489453 ANKRD50Q9ULJ7 1429 aa16.08■□□□□ 0.16
Retrieved 100 of 20,778 RNA–protein pairs in 9.8 ms